data_7NB5 # _model_server_result.job_id A5QH8X7kB75kaCYENWT1yA _model_server_result.datetime_utc '2024-11-24 17:40:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nb5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7NB5 # _exptl.entry_id 7NB5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 353.369 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4-nitrophenyl) (2~{S})-2-(6-methoxynaphthalen-2-yl)propanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NB5 _cell.length_a 47.999 _cell.length_b 89.705 _cell.length_c 125.762 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NB5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H19 N O5' _chem_comp.formula_weight 353.369 _chem_comp.id U68 _chem_comp.mon_nstd_flag . _chem_comp.name '(4-nitrophenyl) (2~{S})-2-(6-methoxynaphthalen-2-yl)propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 O2 U68 sing 358 n n O2 C1 U68 sing 359 n n C2 C1 U68 doub 360 n y C2 C3 U68 sing 361 n y C1 C6 U68 sing 362 n y C3 C4 U68 doub 363 n y C6 C5 U68 doub 364 n y C4 C5 U68 sing 365 n y C4 C7 U68 sing 366 n y C5 C13 U68 sing 367 n y C7 C8 U68 doub 368 n y C13 C11 U68 doub 369 n y C8 C11 U68 sing 370 n y C8 C14 U68 sing 371 n n C14 C10 U68 sing 372 n n C14 C15 U68 sing 373 n n C01 C06 U68 doub 374 n y C01 C02 U68 sing 375 n y C06 C05 U68 sing 376 n y C02 C03 U68 doub 377 n y C05 C04 U68 doub 378 n y O5 N01 U68 sing 379 n n C03 C04 U68 sing 380 n y C04 N01 U68 sing 381 n n N01 O4 U68 sing 382 n n C2 H1 U68 sing 383 n n C3 H2 U68 sing 384 n n C6 H3 U68 sing 385 n n C7 H4 U68 sing 386 n n C10 H5 U68 sing 387 n n C10 H6 U68 sing 388 n n C10 H7 U68 sing 389 n n C11 H8 U68 sing 390 n n C12 H9 U68 sing 391 n n C12 H10 U68 sing 392 n n C12 H11 U68 sing 393 n n C02 H12 U68 sing 394 n n C03 H13 U68 sing 395 n n C05 H14 U68 sing 396 n n C06 H15 U68 sing 397 n n C13 H16 U68 sing 398 n n C14 H17 U68 sing 399 n n C15 O1 U68 doub 400 n n O4 H18 U68 sing 401 n n O5 H19 U68 sing 402 n n C01 O3 U68 sing 403 n n O3 C15 U68 sing 404 n n # _atom_sites.entry_id 7NB5 _atom_sites.fract_transf_matrix[1][1] 0.020834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U68 A 1 301 301 U68 PNA . C 3 HOH A 1 401 29 HOH HOH . C 3 HOH A 2 402 42 HOH HOH . C 3 HOH A 3 403 70 HOH HOH . C 3 HOH A 4 404 1 HOH HOH . C 3 HOH A 5 405 129 HOH HOH . C 3 HOH A 6 406 49 HOH HOH . C 3 HOH A 7 407 8 HOH HOH . C 3 HOH A 8 408 4 HOH HOH . C 3 HOH A 9 409 51 HOH HOH . C 3 HOH A 10 410 72 HOH HOH . C 3 HOH A 11 411 111 HOH HOH . C 3 HOH A 12 412 15 HOH HOH . C 3 HOH A 13 413 13 HOH HOH . C 3 HOH A 14 414 11 HOH HOH . C 3 HOH A 15 415 38 HOH HOH . C 3 HOH A 16 416 26 HOH HOH . C 3 HOH A 17 417 116 HOH HOH . C 3 HOH A 18 418 6 HOH HOH . C 3 HOH A 19 419 5 HOH HOH . C 3 HOH A 20 420 84 HOH HOH . C 3 HOH A 21 421 93 HOH HOH . C 3 HOH A 22 422 27 HOH HOH . C 3 HOH A 23 423 33 HOH HOH . C 3 HOH A 24 424 80 HOH HOH . C 3 HOH A 25 425 10 HOH HOH . C 3 HOH A 26 426 2 HOH HOH . C 3 HOH A 27 427 112 HOH HOH . C 3 HOH A 28 428 123 HOH HOH . C 3 HOH A 29 429 9 HOH HOH . C 3 HOH A 30 430 44 HOH HOH . C 3 HOH A 31 431 52 HOH HOH . C 3 HOH A 32 432 68 HOH HOH . C 3 HOH A 33 433 34 HOH HOH . C 3 HOH A 34 434 43 HOH HOH . C 3 HOH A 35 435 77 HOH HOH . C 3 HOH A 36 436 36 HOH HOH . C 3 HOH A 37 437 40 HOH HOH . C 3 HOH A 38 438 28 HOH HOH . C 3 HOH A 39 439 99 HOH HOH . C 3 HOH A 40 440 98 HOH HOH . C 3 HOH A 41 441 65 HOH HOH . C 3 HOH A 42 442 21 HOH HOH . C 3 HOH A 43 443 31 HOH HOH . C 3 HOH A 44 444 37 HOH HOH . C 3 HOH A 45 445 46 HOH HOH . C 3 HOH A 46 446 30 HOH HOH . C 3 HOH A 47 447 58 HOH HOH . C 3 HOH A 48 448 23 HOH HOH . C 3 HOH A 49 449 17 HOH HOH . C 3 HOH A 50 450 96 HOH HOH . C 3 HOH A 51 451 3 HOH HOH . C 3 HOH A 52 452 22 HOH HOH . C 3 HOH A 53 453 66 HOH HOH . C 3 HOH A 54 454 130 HOH HOH . C 3 HOH A 55 455 62 HOH HOH . C 3 HOH A 56 456 53 HOH HOH . C 3 HOH A 57 457 75 HOH HOH . C 3 HOH A 58 458 86 HOH HOH . C 3 HOH A 59 459 131 HOH HOH . C 3 HOH A 60 460 39 HOH HOH . C 3 HOH A 61 461 32 HOH HOH . C 3 HOH A 62 462 57 HOH HOH . C 3 HOH A 63 463 54 HOH HOH . C 3 HOH A 64 464 47 HOH HOH . C 3 HOH A 65 465 124 HOH HOH . C 3 HOH A 66 466 50 HOH HOH . C 3 HOH A 67 467 16 HOH HOH . C 3 HOH A 68 468 25 HOH HOH . C 3 HOH A 69 469 41 HOH HOH . C 3 HOH A 70 470 12 HOH HOH . C 3 HOH A 71 471 7 HOH HOH . C 3 HOH A 72 472 83 HOH HOH . C 3 HOH A 73 473 85 HOH HOH . C 3 HOH A 74 474 64 HOH HOH . C 3 HOH A 75 475 95 HOH HOH . C 3 HOH A 76 476 79 HOH HOH . C 3 HOH A 77 477 19 HOH HOH . C 3 HOH A 78 478 24 HOH HOH . C 3 HOH A 79 479 127 HOH HOH . C 3 HOH A 80 480 69 HOH HOH . C 3 HOH A 81 481 14 HOH HOH . C 3 HOH A 82 482 73 HOH HOH . C 3 HOH A 83 483 59 HOH HOH . C 3 HOH A 84 484 78 HOH HOH . C 3 HOH A 85 485 102 HOH HOH . C 3 HOH A 86 486 90 HOH HOH . C 3 HOH A 87 487 74 HOH HOH . C 3 HOH A 88 488 48 HOH HOH . C 3 HOH A 89 489 128 HOH HOH . C 3 HOH A 90 490 108 HOH HOH . C 3 HOH A 91 491 120 HOH HOH . C 3 HOH A 92 492 104 HOH HOH . C 3 HOH A 93 493 132 HOH HOH . C 3 HOH A 94 494 114 HOH HOH . C 3 HOH A 95 495 103 HOH HOH . C 3 HOH A 96 496 55 HOH HOH . C 3 HOH A 97 497 92 HOH HOH . C 3 HOH A 98 498 45 HOH HOH . C 3 HOH A 99 499 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 U68 . . . B 2 6.999 17.014 6.179 1 37.01 ? C1 U68 301 A 1 HETATM 2 C C2 U68 . . . B 2 8.271 17.522 6.131 1 32.92 ? C2 U68 301 A 1 HETATM 3 C C3 U68 . . . B 2 9.278 16.97 6.893 1 36.37 ? C3 U68 301 A 1 HETATM 4 C C4 U68 . . . B 2 9.031 15.888 7.735 1 24.03 ? C4 U68 301 A 1 HETATM 5 C C5 U68 . . . B 2 7.734 15.356 7.8 1 21.36 ? C5 U68 301 A 1 HETATM 6 C C6 U68 . . . B 2 6.723 15.93 7.017 1 37.2 ? C6 U68 301 A 1 HETATM 7 C C7 U68 . . . B 2 10.051 15.344 8.496 1 28.09 ? C7 U68 301 A 1 HETATM 8 C C8 U68 . . . B 2 9.831 14.282 9.356 1 31 ? C8 U68 301 A 1 HETATM 9 C C10 U68 . . . B 2 10.795 12.206 10.327 1 46.33 ? C10 U68 301 A 1 HETATM 10 C C11 U68 . . . B 2 8.535 13.743 9.407 1 30.71 ? C11 U68 301 A 1 HETATM 11 C C12 U68 . . . B 2 4.887 16.914 5.041 1 44.65 ? C12 U68 301 A 1 HETATM 12 O O2 U68 . . . B 2 6.034 17.648 5.377 1 41.83 ? O2 U68 301 A 1 HETATM 13 C C01 U68 . . . B 2 12.12 12.845 13.109 1 40.08 ? C01 U68 301 A 1 HETATM 14 N N01 U68 . . . B 2 14.744 9.963 14.72 1 110.28 ? N01 U68 301 A 1 HETATM 15 O O4 U68 . . . B 2 14.887 9.92 15.882 1 99.67 ? O4 U68 301 A 1 HETATM 16 C C02 U68 . . . B 2 13.364 13.21 13.571 1 48.96 ? C02 U68 301 A 1 HETATM 17 O O5 U68 . . . B 2 15.306 9.212 14.014 1 233.77 ? O5 U68 301 A 1 HETATM 18 C C03 U68 . . . B 2 14.232 12.275 14.103 1 15.67 ? C03 U68 301 A 1 HETATM 19 C C04 U68 . . . B 2 13.849 10.954 14.174 1 44.8 ? C04 U68 301 A 1 HETATM 20 C C05 U68 . . . B 2 12.611 10.563 13.715 1 80.43 ? C05 U68 301 A 1 HETATM 21 C C06 U68 . . . B 2 11.75 11.506 13.19 1 116.82 ? C06 U68 301 A 1 HETATM 22 C C13 U68 . . . B 2 7.492 14.277 8.65 1 25.65 ? C13 U68 301 A 1 HETATM 23 C C14 U68 . . . B 2 11.05 13.7 10.09 1 45.83 ? C14 U68 301 A 1 HETATM 24 C C15 U68 . . . B 2 11.505 14.41 11.36 1 48.74 ? C15 U68 301 A 1 HETATM 25 O O1 U68 . . . B 2 12.116 15.421 11.253 1 33.27 ? O1 U68 301 A 1 HETATM 26 O O3 U68 . . . B 2 11.241 13.831 12.605 1 102.93 ? O3 U68 301 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #