data_7NB7 # _model_server_result.job_id cxhYh_VDCyMhhw44jcJBdA _model_server_result.datetime_utc '2024-11-26 16:32:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nb7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7NB7 # _exptl.entry_id 7NB7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.993 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[[7-but-2-ynyl-5-(3-chloranyl-2-methyl-phenyl)-6-ethyl-pyrrolo[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NB7 _cell.length_a 89.281 _cell.length_b 166.106 _cell.length_c 44.874 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NB7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C28 H27 Cl N4 O2' _chem_comp.formula_weight 486.993 _chem_comp.id U6N _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[[7-but-2-ynyl-5-(3-chloranyl-2-methyl-phenyl)-6-ethyl-pyrrolo[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 U6N sing 358 n n C27 C26 U6N doub 359 n y C27 C28 U6N sing 360 n y C26 C25 U6N sing 361 n y C28 C22 U6N doub 362 n y C2 C3 U6N sing 363 n n C25 CL1 U6N sing 364 n n C25 C23 U6N doub 365 n y C22 C23 U6N sing 366 n y C22 C4 U6N sing 367 n n C23 C24 U6N sing 368 n n C3 C4 U6N doub 369 n y C3 N4 U6N sing 370 n y C4 C5 U6N sing 371 n y C18 N4 U6N sing 372 n n C18 C19 U6N sing 373 n n N4 C17 U6N sing 374 n y C19 C20 U6N trip 375 n n O2 C15 U6N doub 376 n n C5 C17 U6N doub 377 n y C5 C6 U6N sing 378 n y C20 C21 U6N sing 379 n n C17 N3 U6N sing 380 n y C14 C13 U6N doub 381 n y C14 C9 U6N sing 382 n y N1 C6 U6N sing 383 n n N1 C7 U6N sing 384 n n C6 N2 U6N doub 385 n y C13 C12 U6N sing 386 n y C15 C7 U6N sing 387 n n C15 O1 U6N sing 388 n n C8 C7 U6N sing 389 n n C8 C9 U6N sing 390 n n N3 C16 U6N doub 391 n y C9 C10 U6N doub 392 n y N2 C16 U6N sing 393 n y C12 C11 U6N doub 394 n y C10 C11 U6N sing 395 n y C1 H1 U6N sing 396 n n C1 H2 U6N sing 397 n n C1 H3 U6N sing 398 n n C2 H4 U6N sing 399 n n C2 H5 U6N sing 400 n n N1 H6 U6N sing 401 n n C7 H7 U6N sing 402 n n C8 H8 U6N sing 403 n n C8 H9 U6N sing 404 n n C10 H10 U6N sing 405 n n C11 H11 U6N sing 406 n n C12 H12 U6N sing 407 n n C13 H13 U6N sing 408 n n C14 H14 U6N sing 409 n n O1 H15 U6N sing 410 n n C16 H16 U6N sing 411 n n C18 H17 U6N sing 412 n n C18 H18 U6N sing 413 n n C21 H19 U6N sing 414 n n C21 H20 U6N sing 415 n n C21 H21 U6N sing 416 n n C24 H22 U6N sing 417 n n C24 H23 U6N sing 418 n n C24 H24 U6N sing 419 n n C26 H25 U6N sing 420 n n C27 H26 U6N sing 421 n n C28 H27 U6N sing 422 n n # _atom_sites.entry_id 7NB7 _atom_sites.fract_transf_matrix[1][1] 0.011201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 U6N A 1 401 401 U6N UNL . F 2 U6N B 1 401 401 U6N UNL . G 2 U6N C 1 401 401 U6N UNL . H 2 U6N D 1 401 401 U6N UNL . I 3 HOH A 1 501 6 HOH HOH . I 3 HOH A 2 502 4 HOH HOH . J 3 HOH B 1 501 5 HOH HOH . J 3 HOH B 2 502 1 HOH HOH . K 3 HOH C 1 501 2 HOH HOH . L 3 HOH D 1 501 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 U6N . . . F 2 24.609 33.552 -1.823 1 19.92 ? C1 U6N 401 B 1 HETATM 2 C C2 U6N . . . F 2 23.385 33.957 -2.594 1 20.19 ? C2 U6N 401 B 1 HETATM 3 C C3 U6N . . . F 2 22.107 33.76 -1.842 1 19.97 ? C3 U6N 401 B 1 HETATM 4 C C4 U6N . . . F 2 21.482 34.648 -1.01 1 19.92 ? C4 U6N 401 B 1 HETATM 5 C C5 U6N . . . F 2 20.303 34.007 -0.498 1 19.77 ? C5 U6N 401 B 1 HETATM 6 C C6 U6N . . . F 2 19.262 34.361 0.396 1 20.36 ? C6 U6N 401 B 1 HETATM 7 N N1 U6N . . . F 2 19.202 35.569 1.006 1 20.14 ? N1 U6N 401 B 1 HETATM 8 C C7 U6N . . . F 2 18.222 35.906 2.013 1 19.94 ? C7 U6N 401 B 1 HETATM 9 C C8 U6N . . . F 2 18.326 37.392 2.389 1 21.48 ? C8 U6N 401 B 1 HETATM 10 C C9 U6N . . . F 2 18.154 38.342 1.233 1 22.32 ? C9 U6N 401 B 1 HETATM 11 C C10 U6N . . . F 2 16.909 38.522 0.647 1 23.4 ? C10 U6N 401 B 1 HETATM 12 C C11 U6N . . . F 2 16.754 39.382 -0.427 1 23.53 ? C11 U6N 401 B 1 HETATM 13 C C12 U6N . . . F 2 17.836 40.084 -0.909 1 23.16 ? C12 U6N 401 B 1 HETATM 14 C C13 U6N . . . F 2 19.072 39.914 -0.335 1 22.46 ? C13 U6N 401 B 1 HETATM 15 C C14 U6N . . . F 2 19.233 39.056 0.739 1 21.85 ? C14 U6N 401 B 1 HETATM 16 C C15 U6N . . . F 2 18.548 35.143 3.298 1 20.74 ? C15 U6N 401 B 1 HETATM 17 O O1 U6N . . . F 2 17.606 34.854 4.086 1 22.82 -1 O1 U6N 401 B 1 HETATM 18 O O2 U6N . . . F 2 19.743 34.882 3.474 1 20.82 ? O2 U6N 401 B 1 HETATM 19 N N2 U6N . . . F 2 18.285 33.461 0.626 1 20.46 ? N2 U6N 401 B 1 HETATM 20 C C16 U6N . . . F 2 18.374 32.276 0.007 1 20.49 ? C16 U6N 401 B 1 HETATM 21 N N3 U6N . . . F 2 19.303 31.824 -0.831 1 20.27 ? N3 U6N 401 B 1 HETATM 22 C C17 U6N . . . F 2 20.256 32.721 -1.072 1 19.66 ? C17 U6N 401 B 1 HETATM 23 N N4 U6N . . . F 2 21.345 32.575 -1.919 1 20.15 ? N4 U6N 401 B 1 HETATM 24 C C18 U6N . . . F 2 21.731 31.369 -2.66 1 20.44 ? C18 U6N 401 B 1 HETATM 25 C C19 U6N . . . F 2 21.653 31.422 -4.12 1 19.24 ? C19 U6N 401 B 1 HETATM 26 C C20 U6N . . . F 2 21.548 31.405 -5.349 1 19.03 ? C20 U6N 401 B 1 HETATM 27 C C21 U6N . . . F 2 21.367 31.342 -6.797 1 20.4 ? C21 U6N 401 B 1 HETATM 28 C C22 U6N . . . F 2 21.965 35.975 -0.634 1 20.57 ? C22 U6N 401 B 1 HETATM 29 C C23 U6N . . . F 2 21.898 37.028 -1.544 1 21.26 ? C23 U6N 401 B 1 HETATM 30 C C24 U6N . . . F 2 21.329 36.8 -2.919 1 20.42 ? C24 U6N 401 B 1 HETATM 31 C C25 U6N . . . F 2 22.375 38.266 -1.139 1 23.22 ? C25 U6N 401 B 1 HETATM 32 CL CL1 U6N . . . F 2 22.33 39.61 -2.24 1 29.51 ? CL1 U6N 401 B 1 HETATM 33 C C26 U6N . . . F 2 22.91 38.475 0.119 1 22.66 ? C26 U6N 401 B 1 HETATM 34 C C27 U6N . . . F 2 22.946 37.436 1.008 1 21.32 ? C27 U6N 401 B 1 HETATM 35 C C28 U6N . . . F 2 22.488 36.192 0.635 1 21.01 ? C28 U6N 401 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #