data_7NEQ # _model_server_result.job_id bhKTfxDHiT2Xb-RPOC88VA _model_server_result.datetime_utc '2024-12-21 16:46:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7neq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1004}' # _entry.id 7NEQ # _exptl.entry_id 7NEQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NEQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N ? 6 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 592 A CYS 592 1_555 A SG CYS 608 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 603 A CYS 603 1_555 F SG CYS 603 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 23 C CYS 23 1_555 B SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 C SG CYS 22 D CYS 22 1_555 C SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 D SG CYS 23 E CYS 23 1_555 D SG CYS 88 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 E SG CYS 22 F CYS 22 1_555 E SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? disulf ? disulf7 F SG CYS 592 B CYS 592 1_555 F SG CYS 608 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 596 A ASN 596 1_555 G C1 NAG . A NAG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 F ND2 ASN 596 B ASN 596 1_555 L C1 NAG . B NAG 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7NEQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 NAG A 1 1001 1001 NAG NAG . H 5 U9N A 1 1002 1201 U9N PEE . I 6 CLR A 1 1003 1301 CLR CLR . J 6 CLR A 1 1004 1401 CLR CLR . K 7 R1H B 1 1101 1101 R1H TAR . L 4 NAG B 1 1102 1001 NAG NAG . M 6 CLR B 1 1103 1101 CLR CLR . N 8 HOH A 1 1101 6 HOH HOH . N 8 HOH A 2 1102 7 HOH HOH . N 8 HOH A 3 1103 11 HOH HOH . N 8 HOH A 4 1104 3 HOH HOH . N 8 HOH A 5 1105 4 HOH HOH . N 8 HOH A 6 1106 2 HOH HOH . N 8 HOH A 7 1107 1 HOH HOH . N 8 HOH A 8 1108 15 HOH HOH . O 8 HOH E 1 301 8 HOH HOH . O 8 HOH E 2 302 10 HOH HOH . P 8 HOH B 1 1201 12 HOH HOH . P 8 HOH B 2 1202 13 HOH HOH . P 8 HOH B 3 1203 17 HOH HOH . P 8 HOH B 4 1204 14 HOH HOH . P 8 HOH B 5 1205 5 HOH HOH . P 8 HOH B 6 1206 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . J 6 117.074 148.863 134.594 1 21.59 ? C1 CLR 1004 A 1 HETATM 2 C C2 CLR . . . J 6 116.572 148.602 136.007 1 21.59 ? C2 CLR 1004 A 1 HETATM 3 C C3 CLR . . . J 6 115.343 149.45 136.303 1 21.59 ? C3 CLR 1004 A 1 HETATM 4 C C4 CLR . . . J 6 114.213 149.05 135.36 1 21.59 ? C4 CLR 1004 A 1 HETATM 5 C C5 CLR . . . J 6 114.704 149.082 133.932 1 21.59 ? C5 CLR 1004 A 1 HETATM 6 C C6 CLR . . . J 6 113.967 149.667 132.977 1 21.59 ? C6 CLR 1004 A 1 HETATM 7 C C7 CLR . . . J 6 113.959 149.139 131.56 1 21.59 ? C7 CLR 1004 A 1 HETATM 8 C C8 CLR . . . J 6 115.332 148.603 131.17 1 21.59 ? C8 CLR 1004 A 1 HETATM 9 C C9 CLR . . . J 6 116.405 148.973 132.189 1 21.59 ? C9 CLR 1004 A 1 HETATM 10 C C10 CLR . . . J 6 116.024 148.462 133.569 1 21.59 ? C10 CLR 1004 A 1 HETATM 11 C C11 CLR . . . J 6 117.801 148.496 131.779 1 21.59 ? C11 CLR 1004 A 1 HETATM 12 C C12 CLR . . . J 6 118.174 148.887 130.349 1 21.59 ? C12 CLR 1004 A 1 HETATM 13 C C13 CLR . . . J 6 117.061 148.433 129.424 1 21.59 ? C13 CLR 1004 A 1 HETATM 14 C C14 CLR . . . J 6 115.79 149.137 129.826 1 21.59 ? C14 CLR 1004 A 1 HETATM 15 C C15 CLR . . . J 6 114.855 148.967 128.64 1 21.59 ? C15 CLR 1004 A 1 HETATM 16 C C16 CLR . . . J 6 115.785 148.895 127.428 1 21.59 ? C16 CLR 1004 A 1 HETATM 17 C C17 CLR . . . J 6 117.213 148.791 127.958 1 21.59 ? C17 CLR 1004 A 1 HETATM 18 C C18 CLR . . . J 6 116.874 146.929 129.561 1 21.59 ? C18 CLR 1004 A 1 HETATM 19 C C19 CLR . . . J 6 115.86 146.947 133.551 1 21.59 ? C19 CLR 1004 A 1 HETATM 20 C C20 CLR . . . J 6 118.041 147.771 127.19 1 21.59 ? C20 CLR 1004 A 1 HETATM 21 C C21 CLR . . . J 6 119.508 147.841 127.595 1 21.59 ? C21 CLR 1004 A 1 HETATM 22 C C22 CLR . . . J 6 117.891 147.97 125.688 1 21.59 ? C22 CLR 1004 A 1 HETATM 23 C C23 CLR . . . J 6 119.176 147.586 124.964 1 21.59 ? C23 CLR 1004 A 1 HETATM 24 C C24 CLR . . . J 6 119.59 148.671 123.978 1 21.59 ? C24 CLR 1004 A 1 HETATM 25 C C25 CLR . . . J 6 120.313 148.067 122.78 1 21.59 ? C25 CLR 1004 A 1 HETATM 26 C C26 CLR . . . J 6 119.439 147.032 122.082 1 21.59 ? C26 CLR 1004 A 1 HETATM 27 C C27 CLR . . . J 6 120.757 149.151 121.806 1 21.59 ? C27 CLR 1004 A 1 HETATM 28 O O1 CLR . . . J 6 114.939 149.241 137.662 1 21.59 ? O1 CLR 1004 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #