data_7NF5 # _model_server_result.job_id V7xjKQ-SCe1yU-2UIsWlnQ _model_server_result.datetime_utc '2024-11-05 13:59:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nf5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 7NF5 # _exptl.entry_id 7NF5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.231 _cell.angle_gamma 90 _cell.entry_id 7NF5 _cell.length_a 110.017 _cell.length_b 55.078 _cell.length_c 47.525 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -9.25621 0 46.614892 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 145 A CYS 145 1_555 B C22 ALD . A ALD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? metalc ? metalc1 A OD1 ASN 228 A ASN 228 1_555 L NA NA . A NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc2 A OD1 ASP 229 A ASP 229 1_555 L NA NA . A NA 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc3 L NA NA . A NA 411 1_555 M O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc4 L NA NA . A NA 411 1_555 M O HOH . A HOH 612 4_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 259 n n C1 H11 IPA sing 260 n n C1 H12 IPA sing 261 n n C1 H13 IPA sing 262 n n C2 C3 IPA sing 263 n n C2 O2 IPA sing 264 n n C2 H2 IPA sing 265 n n C3 H31 IPA sing 266 n n C3 H32 IPA sing 267 n n C3 H33 IPA sing 268 n n O2 HO2 IPA sing 269 n n # _atom_sites.entry_id 7NF5 _atom_sites.fract_transf_matrix[1][1] 0.00909 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001805 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ALD A 1 401 401 ALD ALD . C 3 EDO A 1 402 501 EDO EDO . D 3 EDO A 1 403 601 EDO EDO . E 3 EDO A 1 404 701 EDO EDO . F 4 IPA A 1 405 801 IPA IPA . G 4 IPA A 1 406 901 IPA IPA . H 3 EDO A 1 407 1001 EDO EDO . I 4 IPA A 1 408 1101 IPA IPA . J 5 CL A 1 409 1 CL CL . K 5 CL A 1 410 2 CL CL . L 6 NA A 1 411 1 NA NA . M 7 HOH A 1 501 41 HOH HOH . M 7 HOH A 2 502 108 HOH HOH . M 7 HOH A 3 503 101 HOH HOH . M 7 HOH A 4 504 91 HOH HOH . M 7 HOH A 5 505 102 HOH HOH . M 7 HOH A 6 506 13 HOH HOH . M 7 HOH A 7 507 38 HOH HOH . M 7 HOH A 8 508 66 HOH HOH . M 7 HOH A 9 509 60 HOH HOH . M 7 HOH A 10 510 14 HOH HOH . M 7 HOH A 11 511 77 HOH HOH . M 7 HOH A 12 512 24 HOH HOH . M 7 HOH A 13 513 11 HOH HOH . M 7 HOH A 14 514 76 HOH HOH . M 7 HOH A 15 515 85 HOH HOH . M 7 HOH A 16 516 135 HOH HOH . M 7 HOH A 17 517 67 HOH HOH . M 7 HOH A 18 518 130 HOH HOH . M 7 HOH A 19 519 95 HOH HOH . M 7 HOH A 20 520 27 HOH HOH . M 7 HOH A 21 521 79 HOH HOH . M 7 HOH A 22 522 21 HOH HOH . M 7 HOH A 23 523 50 HOH HOH . M 7 HOH A 24 524 52 HOH HOH . M 7 HOH A 25 525 3 HOH HOH . M 7 HOH A 26 526 90 HOH HOH . M 7 HOH A 27 527 89 HOH HOH . M 7 HOH A 28 528 86 HOH HOH . M 7 HOH A 29 529 31 HOH HOH . M 7 HOH A 30 530 125 HOH HOH . M 7 HOH A 31 531 63 HOH HOH . M 7 HOH A 32 532 112 HOH HOH . M 7 HOH A 33 533 1 HOH HOH . M 7 HOH A 34 534 2 HOH HOH . M 7 HOH A 35 535 10 HOH HOH . M 7 HOH A 36 536 9 HOH HOH . M 7 HOH A 37 537 106 HOH HOH . M 7 HOH A 38 538 80 HOH HOH . M 7 HOH A 39 539 111 HOH HOH . M 7 HOH A 40 540 88 HOH HOH . M 7 HOH A 41 541 134 HOH HOH . M 7 HOH A 42 542 5 HOH HOH . M 7 HOH A 43 543 19 HOH HOH . M 7 HOH A 44 544 81 HOH HOH . M 7 HOH A 45 545 104 HOH HOH . M 7 HOH A 46 546 8 HOH HOH . M 7 HOH A 47 547 58 HOH HOH . M 7 HOH A 48 548 71 HOH HOH . M 7 HOH A 49 549 109 HOH HOH . M 7 HOH A 50 550 43 HOH HOH . M 7 HOH A 51 551 45 HOH HOH . M 7 HOH A 52 552 114 HOH HOH . M 7 HOH A 53 553 34 HOH HOH . M 7 HOH A 54 554 22 HOH HOH . M 7 HOH A 55 555 96 HOH HOH . M 7 HOH A 56 556 54 HOH HOH . M 7 HOH A 57 557 40 HOH HOH . M 7 HOH A 58 558 36 HOH HOH . M 7 HOH A 59 559 100 HOH HOH . M 7 HOH A 60 560 4 HOH HOH . M 7 HOH A 61 561 46 HOH HOH . M 7 HOH A 62 562 53 HOH HOH . M 7 HOH A 63 563 25 HOH HOH . M 7 HOH A 64 564 35 HOH HOH . M 7 HOH A 65 565 49 HOH HOH . M 7 HOH A 66 566 26 HOH HOH . M 7 HOH A 67 567 69 HOH HOH . M 7 HOH A 68 568 74 HOH HOH . M 7 HOH A 69 569 20 HOH HOH . M 7 HOH A 70 570 59 HOH HOH . M 7 HOH A 71 571 94 HOH HOH . M 7 HOH A 72 572 33 HOH HOH . M 7 HOH A 73 573 62 HOH HOH . M 7 HOH A 74 574 17 HOH HOH . M 7 HOH A 75 575 39 HOH HOH . M 7 HOH A 76 576 93 HOH HOH . M 7 HOH A 77 577 28 HOH HOH . M 7 HOH A 78 578 113 HOH HOH . M 7 HOH A 79 579 87 HOH HOH . M 7 HOH A 80 580 75 HOH HOH . M 7 HOH A 81 581 61 HOH HOH . M 7 HOH A 82 582 116 HOH HOH . M 7 HOH A 83 583 132 HOH HOH . M 7 HOH A 84 584 73 HOH HOH . M 7 HOH A 85 585 145 HOH HOH . M 7 HOH A 86 586 23 HOH HOH . M 7 HOH A 87 587 7 HOH HOH . M 7 HOH A 88 588 120 HOH HOH . M 7 HOH A 89 589 64 HOH HOH . M 7 HOH A 90 590 84 HOH HOH . M 7 HOH A 91 591 51 HOH HOH . M 7 HOH A 92 592 131 HOH HOH . M 7 HOH A 93 593 12 HOH HOH . M 7 HOH A 94 594 29 HOH HOH . M 7 HOH A 95 595 70 HOH HOH . M 7 HOH A 96 596 103 HOH HOH . M 7 HOH A 97 597 115 HOH HOH . M 7 HOH A 98 598 97 HOH HOH . M 7 HOH A 99 599 137 HOH HOH . M 7 HOH A 100 600 6 HOH HOH . M 7 HOH A 101 601 65 HOH HOH . M 7 HOH A 102 602 30 HOH HOH . M 7 HOH A 103 603 68 HOH HOH . M 7 HOH A 104 604 127 HOH HOH . M 7 HOH A 105 605 47 HOH HOH . M 7 HOH A 106 606 110 HOH HOH . M 7 HOH A 107 607 15 HOH HOH . M 7 HOH A 108 608 82 HOH HOH . M 7 HOH A 109 609 105 HOH HOH . M 7 HOH A 110 610 138 HOH HOH . M 7 HOH A 111 611 42 HOH HOH . M 7 HOH A 112 612 129 HOH HOH . M 7 HOH A 113 613 119 HOH HOH . M 7 HOH A 114 614 123 HOH HOH . M 7 HOH A 115 615 136 HOH HOH . M 7 HOH A 116 616 122 HOH HOH . M 7 HOH A 117 617 92 HOH HOH . M 7 HOH A 118 618 56 HOH HOH . M 7 HOH A 119 619 107 HOH HOH . M 7 HOH A 120 620 139 HOH HOH . M 7 HOH A 121 621 141 HOH HOH . M 7 HOH A 122 622 144 HOH HOH . M 7 HOH A 123 623 124 HOH HOH . M 7 HOH A 124 624 48 HOH HOH . M 7 HOH A 125 625 128 HOH HOH . M 7 HOH A 126 626 57 HOH HOH . M 7 HOH A 127 627 121 HOH HOH . M 7 HOH A 128 628 142 HOH HOH . M 7 HOH A 129 629 143 HOH HOH . M 7 HOH A 130 630 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . F 4 -0.161 -31.711 5.101 1 41.83 ? C1 IPA 405 A 1 HETATM 2 C C2 IPA . . . F 4 -1.429 -31.608 4.247 1 48.49 ? C2 IPA 405 A 1 HETATM 3 C C3 IPA . . . F 4 -1.802 -30.156 3.918 1 40.55 ? C3 IPA 405 A 1 HETATM 4 O O2 IPA . . . F 4 -1.242 -32.277 3.01 1 47.48 ? O2 IPA 405 A 1 HETATM 5 H H11 IPA . . . F 4 0.619 -32.219 4.534 1 50.2 ? H11 IPA 405 A 1 HETATM 6 H H12 IPA . . . F 4 -0.378 -32.277 6.007 1 50.2 ? H12 IPA 405 A 1 HETATM 7 H H13 IPA . . . F 4 0.178 -30.711 5.37 1 50.2 ? H13 IPA 405 A 1 HETATM 8 H H2 IPA . . . F 4 -2.227 -32.061 4.836 1 58.19 ? H2 IPA 405 A 1 HETATM 9 H H31 IPA . . . F 4 -1.927 -30.048 2.84 1 48.66 ? H31 IPA 405 A 1 HETATM 10 H H32 IPA . . . F 4 -1.009 -29.491 4.26 1 48.66 ? H32 IPA 405 A 1 HETATM 11 H H33 IPA . . . F 4 -2.735 -29.897 4.419 1 48.66 ? H33 IPA 405 A 1 HETATM 12 H HO2 IPA . . . F 4 -0.391 -31.962 2.601 1 56.97 ? HO2 IPA 405 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 12 #