data_7NFZ # _model_server_result.job_id 6OuIxysFShwdRQZlckM9QQ _model_server_result.datetime_utc '2024-11-08 14:33:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nfz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":409}' # _entry.id 7NFZ # _exptl.entry_id 7NFZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NFZ _cell.length_a 51.496 _cell.length_b 65.448 _cell.length_c 90.171 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 2 A SER 2 1_555 K K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc2 A OG SER 2 A SER 2 1_555 K K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc3 A O LEU 3 A LEU 3 1_555 K K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc4 A OD1 ASN 47 A ASN 47 1_555 K K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc5 K K K . A K 410 1_555 L O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.273 ? metalc ? metalc6 K K K . A K 410 1_555 L O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? metalc ? metalc7 K K K . A K 410 1_555 L O HOH . A HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 306 n n P O2 PO4 sing 307 n n P O3 PO4 sing 308 n n P O4 PO4 sing 309 n n # _atom_sites.entry_id 7NFZ _atom_sites.fract_transf_matrix[1][1] 0.019419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CXS A 1 401 350 CXS CXS . C 2 CXS A 1 402 351 CXS CXS . D 2 CXS A 1 403 352 CXS CXS . E 2 CXS A 1 404 353 CXS CXS . F 3 GOL A 1 405 400 GOL GOL . G 3 GOL A 1 406 401 GOL GOL . H 3 GOL A 1 407 402 GOL GOL . I 4 TRS A 1 408 500 TRS TRS . J 5 PO4 A 1 409 600 PO4 PO4 . K 6 K A 1 410 700 K K . L 7 HOH A 1 501 137 HOH HOH . L 7 HOH A 2 502 136 HOH HOH . L 7 HOH A 3 503 227 HOH HOH . L 7 HOH A 4 504 145 HOH HOH . L 7 HOH A 5 505 129 HOH HOH . L 7 HOH A 6 506 110 HOH HOH . L 7 HOH A 7 507 220 HOH HOH . L 7 HOH A 8 508 212 HOH HOH . L 7 HOH A 9 509 128 HOH HOH . L 7 HOH A 10 510 130 HOH HOH . L 7 HOH A 11 511 121 HOH HOH . L 7 HOH A 12 512 213 HOH HOH . L 7 HOH A 13 513 29 HOH HOH . L 7 HOH A 14 514 114 HOH HOH . L 7 HOH A 15 515 100 HOH HOH . L 7 HOH A 16 516 150 HOH HOH . L 7 HOH A 17 517 119 HOH HOH . L 7 HOH A 18 518 104 HOH HOH . L 7 HOH A 19 519 142 HOH HOH . L 7 HOH A 20 520 141 HOH HOH . L 7 HOH A 21 521 3 HOH HOH . L 7 HOH A 22 522 139 HOH HOH . L 7 HOH A 23 523 73 HOH HOH . L 7 HOH A 24 524 194 HOH HOH . L 7 HOH A 25 525 165 HOH HOH . L 7 HOH A 26 526 5 HOH HOH . L 7 HOH A 27 527 24 HOH HOH . L 7 HOH A 28 528 188 HOH HOH . L 7 HOH A 29 529 43 HOH HOH . L 7 HOH A 30 530 41 HOH HOH . L 7 HOH A 31 531 116 HOH HOH . L 7 HOH A 32 532 17 HOH HOH . L 7 HOH A 33 533 115 HOH HOH . L 7 HOH A 34 534 233 HOH HOH . L 7 HOH A 35 535 102 HOH HOH . L 7 HOH A 36 536 31 HOH HOH . L 7 HOH A 37 537 211 HOH HOH . L 7 HOH A 38 538 127 HOH HOH . L 7 HOH A 39 539 172 HOH HOH . L 7 HOH A 40 540 53 HOH HOH . L 7 HOH A 41 541 83 HOH HOH . L 7 HOH A 42 542 18 HOH HOH . L 7 HOH A 43 543 62 HOH HOH . L 7 HOH A 44 544 21 HOH HOH . L 7 HOH A 45 545 132 HOH HOH . L 7 HOH A 46 546 16 HOH HOH . L 7 HOH A 47 547 157 HOH HOH . L 7 HOH A 48 548 65 HOH HOH . L 7 HOH A 49 549 51 HOH HOH . L 7 HOH A 50 550 74 HOH HOH . L 7 HOH A 51 551 42 HOH HOH . L 7 HOH A 52 552 133 HOH HOH . L 7 HOH A 53 553 20 HOH HOH . L 7 HOH A 54 554 105 HOH HOH . L 7 HOH A 55 555 59 HOH HOH . L 7 HOH A 56 556 26 HOH HOH . L 7 HOH A 57 557 111 HOH HOH . L 7 HOH A 58 558 71 HOH HOH . L 7 HOH A 59 559 112 HOH HOH . L 7 HOH A 60 560 2 HOH HOH . L 7 HOH A 61 561 46 HOH HOH . L 7 HOH A 62 562 191 HOH HOH . L 7 HOH A 63 563 10 HOH HOH . L 7 HOH A 64 564 106 HOH HOH . L 7 HOH A 65 565 87 HOH HOH . L 7 HOH A 66 566 149 HOH HOH . L 7 HOH A 67 567 218 HOH HOH . L 7 HOH A 68 568 99 HOH HOH . L 7 HOH A 69 569 234 HOH HOH . L 7 HOH A 70 570 11 HOH HOH . L 7 HOH A 71 571 40 HOH HOH . L 7 HOH A 72 572 80 HOH HOH . L 7 HOH A 73 573 1 HOH HOH . L 7 HOH A 74 574 67 HOH HOH . L 7 HOH A 75 575 91 HOH HOH . L 7 HOH A 76 576 171 HOH HOH . L 7 HOH A 77 577 70 HOH HOH . L 7 HOH A 78 578 93 HOH HOH . L 7 HOH A 79 579 88 HOH HOH . L 7 HOH A 80 580 47 HOH HOH . L 7 HOH A 81 581 32 HOH HOH . L 7 HOH A 82 582 37 HOH HOH . L 7 HOH A 83 583 199 HOH HOH . L 7 HOH A 84 584 36 HOH HOH . L 7 HOH A 85 585 66 HOH HOH . L 7 HOH A 86 586 94 HOH HOH . L 7 HOH A 87 587 168 HOH HOH . L 7 HOH A 88 588 210 HOH HOH . L 7 HOH A 89 589 54 HOH HOH . L 7 HOH A 90 590 86 HOH HOH . L 7 HOH A 91 591 7 HOH HOH . L 7 HOH A 92 592 177 HOH HOH . L 7 HOH A 93 593 33 HOH HOH . L 7 HOH A 94 594 167 HOH HOH . L 7 HOH A 95 595 169 HOH HOH . L 7 HOH A 96 596 160 HOH HOH . L 7 HOH A 97 597 28 HOH HOH . L 7 HOH A 98 598 107 HOH HOH . L 7 HOH A 99 599 125 HOH HOH . L 7 HOH A 100 600 4 HOH HOH . L 7 HOH A 101 601 39 HOH HOH . L 7 HOH A 102 602 25 HOH HOH . L 7 HOH A 103 603 84 HOH HOH . L 7 HOH A 104 604 182 HOH HOH . L 7 HOH A 105 605 103 HOH HOH . L 7 HOH A 106 606 140 HOH HOH . L 7 HOH A 107 607 49 HOH HOH . L 7 HOH A 108 608 56 HOH HOH . L 7 HOH A 109 609 6 HOH HOH . L 7 HOH A 110 610 19 HOH HOH . L 7 HOH A 111 611 226 HOH HOH . L 7 HOH A 112 612 89 HOH HOH . L 7 HOH A 113 613 181 HOH HOH . L 7 HOH A 114 614 78 HOH HOH . L 7 HOH A 115 615 61 HOH HOH . L 7 HOH A 116 616 8 HOH HOH . L 7 HOH A 117 617 108 HOH HOH . L 7 HOH A 118 618 122 HOH HOH . L 7 HOH A 119 619 92 HOH HOH . L 7 HOH A 120 620 55 HOH HOH . L 7 HOH A 121 621 187 HOH HOH . L 7 HOH A 122 622 170 HOH HOH . L 7 HOH A 123 623 30 HOH HOH . L 7 HOH A 124 624 50 HOH HOH . L 7 HOH A 125 625 82 HOH HOH . L 7 HOH A 126 626 215 HOH HOH . L 7 HOH A 127 627 174 HOH HOH . L 7 HOH A 128 628 178 HOH HOH . L 7 HOH A 129 629 217 HOH HOH . L 7 HOH A 130 630 179 HOH HOH . L 7 HOH A 131 631 235 HOH HOH . L 7 HOH A 132 632 45 HOH HOH . L 7 HOH A 133 633 68 HOH HOH . L 7 HOH A 134 634 180 HOH HOH . L 7 HOH A 135 635 158 HOH HOH . L 7 HOH A 136 636 143 HOH HOH . L 7 HOH A 137 637 109 HOH HOH . L 7 HOH A 138 638 95 HOH HOH . L 7 HOH A 139 639 189 HOH HOH . L 7 HOH A 140 640 14 HOH HOH . L 7 HOH A 141 641 12 HOH HOH . L 7 HOH A 142 642 44 HOH HOH . L 7 HOH A 143 643 9 HOH HOH . L 7 HOH A 144 644 123 HOH HOH . L 7 HOH A 145 645 117 HOH HOH . L 7 HOH A 146 646 197 HOH HOH . L 7 HOH A 147 647 34 HOH HOH . L 7 HOH A 148 648 216 HOH HOH . L 7 HOH A 149 649 126 HOH HOH . L 7 HOH A 150 650 241 HOH HOH . L 7 HOH A 151 651 75 HOH HOH . L 7 HOH A 152 652 63 HOH HOH . L 7 HOH A 153 653 64 HOH HOH . L 7 HOH A 154 654 22 HOH HOH . L 7 HOH A 155 655 77 HOH HOH . L 7 HOH A 156 656 13 HOH HOH . L 7 HOH A 157 657 35 HOH HOH . L 7 HOH A 158 658 85 HOH HOH . L 7 HOH A 159 659 163 HOH HOH . L 7 HOH A 160 660 98 HOH HOH . L 7 HOH A 161 661 52 HOH HOH . L 7 HOH A 162 662 15 HOH HOH . L 7 HOH A 163 663 58 HOH HOH . L 7 HOH A 164 664 23 HOH HOH . L 7 HOH A 165 665 238 HOH HOH . L 7 HOH A 166 666 152 HOH HOH . L 7 HOH A 167 667 118 HOH HOH . L 7 HOH A 168 668 151 HOH HOH . L 7 HOH A 169 669 57 HOH HOH . L 7 HOH A 170 670 48 HOH HOH . L 7 HOH A 171 671 79 HOH HOH . L 7 HOH A 172 672 147 HOH HOH . L 7 HOH A 173 673 60 HOH HOH . L 7 HOH A 174 674 69 HOH HOH . L 7 HOH A 175 675 202 HOH HOH . L 7 HOH A 176 676 124 HOH HOH . L 7 HOH A 177 677 131 HOH HOH . L 7 HOH A 178 678 146 HOH HOH . L 7 HOH A 179 679 134 HOH HOH . L 7 HOH A 180 680 242 HOH HOH . L 7 HOH A 181 681 228 HOH HOH . L 7 HOH A 182 682 205 HOH HOH . L 7 HOH A 183 683 27 HOH HOH . L 7 HOH A 184 684 206 HOH HOH . L 7 HOH A 185 685 90 HOH HOH . L 7 HOH A 186 686 153 HOH HOH . L 7 HOH A 187 687 162 HOH HOH . L 7 HOH A 188 688 166 HOH HOH . L 7 HOH A 189 689 201 HOH HOH . L 7 HOH A 190 690 135 HOH HOH . L 7 HOH A 191 691 148 HOH HOH . L 7 HOH A 192 692 223 HOH HOH . L 7 HOH A 193 693 176 HOH HOH . L 7 HOH A 194 694 155 HOH HOH . L 7 HOH A 195 695 113 HOH HOH . L 7 HOH A 196 696 208 HOH HOH . L 7 HOH A 197 697 96 HOH HOH . L 7 HOH A 198 698 154 HOH HOH . L 7 HOH A 199 699 207 HOH HOH . L 7 HOH A 200 700 229 HOH HOH . L 7 HOH A 201 701 203 HOH HOH . L 7 HOH A 202 702 101 HOH HOH . L 7 HOH A 203 703 209 HOH HOH . L 7 HOH A 204 704 72 HOH HOH . L 7 HOH A 205 705 164 HOH HOH . L 7 HOH A 206 706 224 HOH HOH . L 7 HOH A 207 707 222 HOH HOH . L 7 HOH A 208 708 221 HOH HOH . L 7 HOH A 209 709 244 HOH HOH . L 7 HOH A 210 710 159 HOH HOH . L 7 HOH A 211 711 173 HOH HOH . L 7 HOH A 212 712 195 HOH HOH . L 7 HOH A 213 713 144 HOH HOH . L 7 HOH A 214 714 138 HOH HOH . L 7 HOH A 215 715 196 HOH HOH . L 7 HOH A 216 716 246 HOH HOH . L 7 HOH A 217 717 190 HOH HOH . L 7 HOH A 218 718 156 HOH HOH . L 7 HOH A 219 719 204 HOH HOH . L 7 HOH A 220 720 192 HOH HOH . L 7 HOH A 221 721 245 HOH HOH . L 7 HOH A 222 722 120 HOH HOH . L 7 HOH A 223 723 175 HOH HOH . L 7 HOH A 224 724 76 HOH HOH . L 7 HOH A 225 725 237 HOH HOH . L 7 HOH A 226 726 193 HOH HOH . L 7 HOH A 227 727 243 HOH HOH . L 7 HOH A 228 728 230 HOH HOH . L 7 HOH A 229 729 239 HOH HOH . L 7 HOH A 230 730 236 HOH HOH . L 7 HOH A 231 731 161 HOH HOH . L 7 HOH A 232 732 214 HOH HOH . L 7 HOH A 233 733 200 HOH HOH . L 7 HOH A 234 734 97 HOH HOH . L 7 HOH A 235 735 81 HOH HOH . L 7 HOH A 236 736 232 HOH HOH . L 7 HOH A 237 737 231 HOH HOH . L 7 HOH A 238 738 184 HOH HOH . L 7 HOH A 239 739 198 HOH HOH . L 7 HOH A 240 740 185 HOH HOH . L 7 HOH A 241 741 38 HOH HOH . L 7 HOH A 242 742 186 HOH HOH . L 7 HOH A 243 743 225 HOH HOH . L 7 HOH A 244 744 183 HOH HOH . L 7 HOH A 245 745 219 HOH HOH . L 7 HOH A 246 746 240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 5 -18.007 11.211 -4.427 0.59 16.92 ? P PO4 409 A 1 HETATM 2 O O1 PO4 . . . J 5 -17.23 10.845 -5.668 0.59 23.19 ? O1 PO4 409 A 1 HETATM 3 O O2 PO4 . . . J 5 -18.549 12.619 -4.53 0.59 13.97 ? O2 PO4 409 A 1 HETATM 4 O O3 PO4 . . . J 5 -19.124 10.222 -4.206 0.59 12.79 -1 O3 PO4 409 A 1 HETATM 5 O O4 PO4 . . . J 5 -17.04 11.183 -3.272 0.59 15.06 ? O4 PO4 409 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #