data_7NGM # _model_server_result.job_id '_dSQ1wVUUrDrF1S8pVoY-g' _model_server_result.datetime_utc '2024-11-29 01:00:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ngm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7NGM # _exptl.entry_id 7NGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 246.348 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methyl-~{N}-[(1~{R})-1-phenylethyl]piperidine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NGM _cell.length_a 121.416 _cell.length_b 121.416 _cell.length_c 33.709 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H22 N2 O' _chem_comp.formula_weight 246.348 _chem_comp.id UAK _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-~{N}-[(1~{R})-1-phenylethyl]piperidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 UAK doub 345 n y C10 C9 UAK sing 346 n y C11 C12 UAK sing 347 n y C9 C8 UAK doub 348 n y O1 C5 UAK doub 349 n n C12 C13 UAK doub 350 n y C8 C13 UAK sing 351 n y C8 C6 UAK sing 352 n n C4 C3 UAK sing 353 n n C4 N1 UAK sing 354 n n C5 N1 UAK sing 355 n n C5 N2 UAK sing 356 n n C6 N2 UAK sing 357 n n C6 C7 UAK sing 358 n n C3 C2 UAK sing 359 n n N1 C14 UAK sing 360 n n C2 C1 UAK sing 361 n n C2 C15 UAK sing 362 n n C14 C15 UAK sing 363 n n C4 H1 UAK sing 364 n n C4 H2 UAK sing 365 n n C14 H3 UAK sing 366 n n C14 H4 UAK sing 367 n n C6 H5 UAK sing 368 n n C11 H6 UAK sing 369 n n C7 H7 UAK sing 370 n n C7 H8 UAK sing 371 n n C7 H9 UAK sing 372 n n C9 H10 UAK sing 373 n n C10 H11 UAK sing 374 n n C12 H12 UAK sing 375 n n C13 H13 UAK sing 376 n n N2 H14 UAK sing 377 n n C3 H15 UAK sing 378 n n C3 H16 UAK sing 379 n n C1 H17 UAK sing 380 n n C1 H18 UAK sing 381 n n C1 H19 UAK sing 382 n n C2 H20 UAK sing 383 n n C15 H21 UAK sing 384 n n C15 H22 UAK sing 385 n n # _atom_sites.entry_id 7NGM _atom_sites.fract_transf_matrix[1][1] 0.008236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UAK A 1 401 401 UAK DRG . C 3 HOH A 1 501 50 HOH HOH . C 3 HOH A 2 502 60 HOH HOH . C 3 HOH A 3 503 41 HOH HOH . C 3 HOH A 4 504 28 HOH HOH . C 3 HOH A 5 505 19 HOH HOH . C 3 HOH A 6 506 13 HOH HOH . C 3 HOH A 7 507 40 HOH HOH . C 3 HOH A 8 508 15 HOH HOH . C 3 HOH A 9 509 45 HOH HOH . C 3 HOH A 10 510 33 HOH HOH . C 3 HOH A 11 511 7 HOH HOH . C 3 HOH A 12 512 10 HOH HOH . C 3 HOH A 13 513 11 HOH HOH . C 3 HOH A 14 514 29 HOH HOH . C 3 HOH A 15 515 43 HOH HOH . C 3 HOH A 16 516 44 HOH HOH . C 3 HOH A 17 517 57 HOH HOH . C 3 HOH A 18 518 5 HOH HOH . C 3 HOH A 19 519 59 HOH HOH . C 3 HOH A 20 520 64 HOH HOH . C 3 HOH A 21 521 22 HOH HOH . C 3 HOH A 22 522 24 HOH HOH . C 3 HOH A 23 523 1 HOH HOH . C 3 HOH A 24 524 3 HOH HOH . C 3 HOH A 25 525 23 HOH HOH . C 3 HOH A 26 526 46 HOH HOH . C 3 HOH A 27 527 35 HOH HOH . C 3 HOH A 28 528 39 HOH HOH . C 3 HOH A 29 529 6 HOH HOH . C 3 HOH A 30 530 26 HOH HOH . C 3 HOH A 31 531 9 HOH HOH . C 3 HOH A 32 532 66 HOH HOH . C 3 HOH A 33 533 61 HOH HOH . C 3 HOH A 34 534 4 HOH HOH . C 3 HOH A 35 535 42 HOH HOH . C 3 HOH A 36 536 30 HOH HOH . C 3 HOH A 37 537 17 HOH HOH . C 3 HOH A 38 538 38 HOH HOH . C 3 HOH A 39 539 16 HOH HOH . C 3 HOH A 40 540 49 HOH HOH . C 3 HOH A 41 541 18 HOH HOH . C 3 HOH A 42 542 51 HOH HOH . C 3 HOH A 43 543 62 HOH HOH . C 3 HOH A 44 544 2 HOH HOH . C 3 HOH A 45 545 36 HOH HOH . C 3 HOH A 46 546 67 HOH HOH . C 3 HOH A 47 547 21 HOH HOH . C 3 HOH A 48 548 8 HOH HOH . C 3 HOH A 49 549 37 HOH HOH . C 3 HOH A 50 550 20 HOH HOH . C 3 HOH A 51 551 58 HOH HOH . C 3 HOH A 52 552 65 HOH HOH . C 3 HOH A 53 553 12 HOH HOH . C 3 HOH A 54 554 32 HOH HOH . C 3 HOH A 55 555 52 HOH HOH . C 3 HOH A 56 556 54 HOH HOH . C 3 HOH A 57 557 48 HOH HOH . C 3 HOH A 58 558 55 HOH HOH . C 3 HOH A 59 559 34 HOH HOH . C 3 HOH A 60 560 47 HOH HOH . C 3 HOH A 61 561 63 HOH HOH . C 3 HOH A 62 562 72 HOH HOH . C 3 HOH A 63 563 68 HOH HOH . C 3 HOH A 64 564 31 HOH HOH . C 3 HOH A 65 565 56 HOH HOH . C 3 HOH A 66 566 25 HOH HOH . C 3 HOH A 67 567 27 HOH HOH . C 3 HOH A 68 568 69 HOH HOH . C 3 HOH A 69 569 14 HOH HOH . C 3 HOH A 70 570 70 HOH HOH . C 3 HOH A 71 571 71 HOH HOH . C 3 HOH A 72 572 73 HOH HOH . C 3 HOH A 73 573 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 UAK . . . B 2 -11.378 -27.223 1.867 1 42.49 ? C4 UAK 401 A 1 HETATM 2 C C14 UAK . . . B 2 -12.049 -28.48 3.945 1 40.06 ? C14 UAK 401 A 1 HETATM 3 C C5 UAK . . . B 2 -13.573 -28.302 1.901 1 38.72 ? C5 UAK 401 A 1 HETATM 4 C C6 UAK . . . B 2 -15.96 -28.851 2.123 1 35.31 ? C6 UAK 401 A 1 HETATM 5 C C11 UAK . . . B 2 -17.082 -32.215 -0.339 1 38.89 ? C11 UAK 401 A 1 HETATM 6 C C7 UAK . . . B 2 -16.833 -28.803 3.365 1 37.46 ? C7 UAK 401 A 1 HETATM 7 C C8 UAK . . . B 2 -16.339 -30.039 1.254 1 32.88 ? C8 UAK 401 A 1 HETATM 8 C C9 UAK . . . B 2 -16.888 -29.863 -0.001 1 33.17 ? C9 UAK 401 A 1 HETATM 9 C C10 UAK . . . B 2 -17.27 -30.941 -0.786 1 35.59 ? C10 UAK 401 A 1 HETATM 10 C C12 UAK . . . B 2 -16.533 -32.415 0.914 1 42.2 ? C12 UAK 401 A 1 HETATM 11 C C13 UAK . . . B 2 -16.162 -31.333 1.706 1 41.59 ? C13 UAK 401 A 1 HETATM 12 N N1 UAK . . . B 2 -12.36 -28.083 2.545 1 36.84 ? N1 UAK 401 A 1 HETATM 13 N N2 UAK . . . B 2 -14.56 -28.848 2.579 1 34.77 ? N2 UAK 401 A 1 HETATM 14 C C3 UAK . . . B 2 -9.938 -27.439 2.29 1 38.13 ? C3 UAK 401 A 1 HETATM 15 C C1 UAK . . . B 2 -8.307 -27.342 4.207 1 39.67 ? C1 UAK 401 A 1 HETATM 16 C C2 UAK . . . B 2 -9.769 -27.378 3.784 1 37.49 ? C2 UAK 401 A 1 HETATM 17 O O1 UAK . . . B 2 -13.765 -27.98 0.716 1 39.5 ? O1 UAK 401 A 1 HETATM 18 C C15 UAK . . . B 2 -10.566 -28.551 4.313 1 40.64 ? C15 UAK 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 463 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #