data_7NHF # _model_server_result.job_id sK6x8atvPLVvbvuOOjictA _model_server_result.datetime_utc '2024-10-20 01:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nhf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 7NHF # _exptl.entry_id 7NHF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NHF _cell.length_a 178.001 _cell.length_b 178.001 _cell.length_c 115.127 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NHF _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 7NHF _atom_sites.fract_transf_matrix[1][1] 0.005618 _atom_sites.fract_transf_matrix[1][2] 0.003244 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008686 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 1 PO4 PO4 . F 2 PO4 B 1 301 3 PO4 PO4 . G 2 PO4 C 1 301 4 PO4 PO4 . H 2 PO4 D 1 301 2 PO4 PO4 . I 3 HOH A 1 401 18 HOH HOH . I 3 HOH A 2 402 28 HOH HOH . I 3 HOH A 3 403 3 HOH HOH . I 3 HOH A 4 404 4 HOH HOH . I 3 HOH A 5 405 10 HOH HOH . I 3 HOH A 6 406 8 HOH HOH . I 3 HOH A 7 407 5 HOH HOH . I 3 HOH A 8 408 6 HOH HOH . I 3 HOH A 9 409 9 HOH HOH . I 3 HOH A 10 410 13 HOH HOH . I 3 HOH A 11 411 29 HOH HOH . I 3 HOH A 12 412 7 HOH HOH . I 3 HOH A 13 413 11 HOH HOH . I 3 HOH A 14 414 1 HOH HOH . I 3 HOH A 15 415 12 HOH HOH . J 3 HOH B 1 401 20 HOH HOH . J 3 HOH B 2 402 37 HOH HOH . J 3 HOH B 3 403 30 HOH HOH . J 3 HOH B 4 404 31 HOH HOH . J 3 HOH B 5 405 38 HOH HOH . J 3 HOH B 6 406 21 HOH HOH . J 3 HOH B 7 407 17 HOH HOH . J 3 HOH B 8 408 15 HOH HOH . K 3 HOH C 1 401 22 HOH HOH . K 3 HOH C 2 402 24 HOH HOH . K 3 HOH C 3 403 19 HOH HOH . K 3 HOH C 4 404 25 HOH HOH . K 3 HOH C 5 405 36 HOH HOH . K 3 HOH C 6 406 32 HOH HOH . K 3 HOH C 7 407 23 HOH HOH . K 3 HOH C 8 408 35 HOH HOH . K 3 HOH C 9 409 16 HOH HOH . L 3 HOH D 1 401 33 HOH HOH . L 3 HOH D 2 402 26 HOH HOH . L 3 HOH D 3 403 27 HOH HOH . L 3 HOH D 4 404 2 HOH HOH . L 3 HOH D 5 405 14 HOH HOH . L 3 HOH D 6 406 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 2 -16.658 -26.439 -28.338 1 81.88 ? P PO4 301 C 1 HETATM 2 O O1 PO4 . . . G 2 -16.107 -25.472 -29.4 1 105.75 ? O1 PO4 301 C 1 HETATM 3 O O2 PO4 . . . G 2 -18.058 -26.872 -28.745 1 86.48 ? O2 PO4 301 C 1 HETATM 4 O O3 PO4 . . . G 2 -15.758 -27.661 -28.264 1 95.14 ? O3 PO4 301 C 1 HETATM 5 O O4 PO4 . . . G 2 -16.7 -25.752 -26.963 1 86.38 ? O4 PO4 301 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #