data_7NHP # _model_server_result.job_id s08bTUy1PnPU5OOblF1paw _model_server_result.datetime_utc '2024-11-04 23:26:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nhp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":409}' # _entry.id 7NHP # _exptl.entry_id 7NHP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 722.97 _entity.id 24 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NHP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 24 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 215 A HIS 215 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc2 A NE2 HIS 272 A HIS 272 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc3 D NE2 HIS 214 D HIS 214 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc4 D OE2 GLU 241 D GLU 241 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc5 D NE2 HIS 268 D HIS 268 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc6 E NE2 HIS 23 E HIS 23 1_555 WB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? # _chem_comp.formula 'C38 H75 O10 P' _chem_comp.formula_weight 722.97 _chem_comp.id LHG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 LHG sing 516 n n O1 HO1 LHG sing 517 n n C1 C2 LHG sing 518 n n C1 HC11 LHG sing 519 n n C1 HC12 LHG sing 520 n n C2 O2 LHG sing 521 n n C2 C3 LHG sing 522 n n C2 HC2 LHG sing 523 n n O2 H02 LHG sing 524 n n C3 O3 LHG sing 525 n n C3 HC31 LHG sing 526 n n C3 HC32 LHG sing 527 n n O3 P LHG sing 528 n n P O4 LHG sing 529 n n P O5 LHG doub 530 n n P O6 LHG sing 531 n n O4 HO4 LHG sing 532 n n O6 C4 LHG sing 533 n n C4 C5 LHG sing 534 n n C4 HC41 LHG sing 535 n n C4 HC42 LHG sing 536 n n C5 C6 LHG sing 537 n n C5 O7 LHG sing 538 n n C5 HC5 LHG sing 539 n n C6 O8 LHG sing 540 n n C6 HC61 LHG sing 541 n n C6 HC62 LHG sing 542 n n O7 C7 LHG sing 543 n n C7 O9 LHG doub 544 n n C7 C8 LHG sing 545 n n C8 C9 LHG sing 546 n n C8 HC81 LHG sing 547 n n C8 HC82 LHG sing 548 n n C9 C10 LHG sing 549 n n C9 HC91 LHG sing 550 n n C9 HC92 LHG sing 551 n n C10 C11 LHG sing 552 n n C10 H101 LHG sing 553 n n C10 H102 LHG sing 554 n n O8 C23 LHG sing 555 n n C23 O10 LHG doub 556 n n C23 C24 LHG sing 557 n n C24 C25 LHG sing 558 n n C24 H241 LHG sing 559 n n C24 H242 LHG sing 560 n n C11 C12 LHG sing 561 n n C11 H111 LHG sing 562 n n C11 H112 LHG sing 563 n n C12 C13 LHG sing 564 n n C12 H121 LHG sing 565 n n C12 H122 LHG sing 566 n n C13 C14 LHG sing 567 n n C13 H131 LHG sing 568 n n C13 H132 LHG sing 569 n n C14 C15 LHG sing 570 n n C14 H141 LHG sing 571 n n C14 H142 LHG sing 572 n n C15 C16 LHG sing 573 n n C15 H151 LHG sing 574 n n C15 H152 LHG sing 575 n n C16 C17 LHG sing 576 n n C16 H161 LHG sing 577 n n C16 H162 LHG sing 578 n n C17 C18 LHG sing 579 n n C17 H171 LHG sing 580 n n C17 H172 LHG sing 581 n n C18 C19 LHG sing 582 n n C18 H181 LHG sing 583 n n C18 H182 LHG sing 584 n n C19 C20 LHG sing 585 n n C19 H191 LHG sing 586 n n C19 H192 LHG sing 587 n n C20 C21 LHG sing 588 n n C20 H201 LHG sing 589 n n C20 H202 LHG sing 590 n n C21 C22 LHG sing 591 n n C21 H211 LHG sing 592 n n C21 H212 LHG sing 593 n n C22 H221 LHG sing 594 n n C22 H222 LHG sing 595 n n C22 H223 LHG sing 596 n n C25 C26 LHG sing 597 n n C25 H251 LHG sing 598 n n C25 H252 LHG sing 599 n n C26 C27 LHG sing 600 n n C26 H261 LHG sing 601 n n C26 H262 LHG sing 602 n n C27 C28 LHG sing 603 n n C27 H271 LHG sing 604 n n C27 H272 LHG sing 605 n n C28 C29 LHG sing 606 n n C28 H281 LHG sing 607 n n C28 H282 LHG sing 608 n n C29 C30 LHG sing 609 n n C29 H291 LHG sing 610 n n C29 H292 LHG sing 611 n n C30 C31 LHG sing 612 n n C30 H301 LHG sing 613 n n C30 H302 LHG sing 614 n n C31 C32 LHG sing 615 n n C31 H311 LHG sing 616 n n C31 H312 LHG sing 617 n n C32 C33 LHG sing 618 n n C32 H321 LHG sing 619 n n C32 H322 LHG sing 620 n n C33 C34 LHG sing 621 n n C33 H331 LHG sing 622 n n C33 H332 LHG sing 623 n n C34 C35 LHG sing 624 n n C34 H341 LHG sing 625 n n C34 H342 LHG sing 626 n n C35 C36 LHG sing 627 n n C35 H351 LHG sing 628 n n C35 H352 LHG sing 629 n n C36 C37 LHG sing 630 n n C36 H361 LHG sing 631 n n C36 H362 LHG sing 632 n n C37 C38 LHG sing 633 n n C37 H371 LHG sing 634 n n C37 H372 LHG sing 635 n n C38 H381 LHG sing 636 n n C38 H382 LHG sing 637 n n C38 H383 LHG sing 638 n n # _atom_sites.entry_id 7NHP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 19 MN A 1 401 401 MN MN . T 20 CL A 1 402 403 CL CL . U 21 PHO A 1 403 365 PHO PHO . V 22 CLA A 1 404 362 CLA CLA . W 22 CLA A 1 405 363 CLA CLA . X 22 CLA A 1 406 364 CLA CLA . Y 22 CLA A 1 407 366 CLA CLA . Z 23 BCR A 1 408 369 BCR BCR . AA 24 LHG A 1 409 371 LHG LHG . BA 22 CLA B 1 601 511 CLA CLA . CA 22 CLA B 1 602 512 CLA CLA . DA 22 CLA B 1 603 513 CLA CLA . EA 22 CLA B 1 604 514 CLA CLA . FA 22 CLA B 1 605 515 CLA CLA . GA 22 CLA B 1 606 516 CLA CLA . HA 22 CLA B 1 607 517 CLA CLA . IA 22 CLA B 1 608 518 CLA CLA . JA 22 CLA B 1 609 519 CLA CLA . KA 22 CLA B 1 610 520 CLA CLA . LA 22 CLA B 1 611 521 CLA CLA . MA 22 CLA B 1 612 522 CLA CLA . NA 22 CLA B 1 613 523 CLA CLA . OA 22 CLA B 1 614 524 CLA CLA . PA 22 CLA B 1 615 525 CLA CLA . QA 22 CLA B 1 616 526 CLA CLA . RA 23 BCR B 1 617 527 BCR BCR . SA 23 BCR B 1 618 529 BCR BCR . TA 23 BCR B 1 619 530 BCR BCR . UA 25 LMG C 1 501 482 LMG LMG . VA 25 LMG C 1 502 492 LMG LMG . WA 22 CLA C 1 503 465 CLA CLA . XA 22 CLA C 1 504 466 CLA CLA . YA 22 CLA C 1 505 467 CLA CLA . ZA 22 CLA C 1 506 468 CLA CLA . AB 22 CLA C 1 507 469 CLA CLA . BB 22 CLA C 1 508 470 CLA CLA . CB 22 CLA C 1 509 471 CLA CLA . DB 22 CLA C 1 510 472 CLA CLA . EB 22 CLA C 1 511 473 CLA CLA . FB 22 CLA C 1 512 474 CLA CLA . GB 22 CLA C 1 513 475 CLA CLA . HB 22 CLA C 1 514 476 CLA CLA . IB 23 BCR C 1 515 477 BCR BCR . JB 23 BCR C 1 516 478 BCR BCR . KB 22 CLA C 1 517 483 CLA CLA . LB 23 BCR C 1 518 116 BCR BCR . MB 26 FE D 1 401 361 FE FE . NB 25 LMG D 1 402 373 LMG LMG . OB 25 LMG D 1 403 531 LMG LMG . PB 25 LMG D 1 404 359 LMG LMG . QB 25 LMG D 1 405 360 LMG LMG . RB 27 PL9 D 1 406 357 PL9 PL9 . SB 21 PHO D 1 407 355 PHO PHO . TB 22 CLA D 1 408 354 CLA CLA . UB 22 CLA D 1 409 356 CLA CLA . VB 23 BCR D 1 410 358 BCR BCR . WB 28 HEM E 1 101 85 HEM HEM . XB 23 BCR H 1 101 98 BCR BCR . YB 25 LMG I 1 101 220 LMG LMG . ZB 23 BCR K 1 101 112 BCR BCR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LHG . . . AA 24 167.095 152.473 174.201 1 117.33 ? O1 LHG 409 A 1 HETATM 2 C C1 LHG . . . AA 24 167.296 151.345 175.053 1 117.33 ? C1 LHG 409 A 1 HETATM 3 C C2 LHG . . . AA 24 166.914 150.048 174.343 1 117.33 ? C2 LHG 409 A 1 HETATM 4 O O2 LHG . . . AA 24 167.106 148.968 175.257 1 117.33 ? O2 LHG 409 A 1 HETATM 5 C C3 LHG . . . AA 24 167.745 149.741 173.077 1 117.33 ? C3 LHG 409 A 1 HETATM 6 O O3 LHG . . . AA 24 166.931 150.27 172.016 1 117.33 ? O3 LHG 409 A 1 HETATM 7 P P LHG . . . AA 24 166.703 149.464 170.594 1 117.33 ? P LHG 409 A 1 HETATM 8 O O4 LHG . . . AA 24 166.152 150.423 169.597 1 117.33 ? O4 LHG 409 A 1 HETATM 9 O O5 LHG . . . AA 24 167.842 148.512 170.509 1 117.33 ? O5 LHG 409 A 1 HETATM 10 O O6 LHG . . . AA 24 165.343 148.578 171.069 1 117.33 ? O6 LHG 409 A 1 HETATM 11 C C4 LHG . . . AA 24 164.058 149.131 171.269 1 117.33 ? C4 LHG 409 A 1 HETATM 12 C C5 LHG . . . AA 24 163.343 148.961 169.915 1 117.33 ? C5 LHG 409 A 1 HETATM 13 C C6 LHG . . . AA 24 163.225 147.465 169.591 1 117.33 ? C6 LHG 409 A 1 HETATM 14 O O7 LHG . . . AA 24 162.005 149.484 170.05 1 117.33 ? O7 LHG 409 A 1 HETATM 15 C C7 LHG . . . AA 24 161.834 150.842 169.856 1 117.33 ? C7 LHG 409 A 1 HETATM 16 O O9 LHG . . . AA 24 162.758 151.632 169.748 1 117.33 ? O9 LHG 409 A 1 HETATM 17 C C8 LHG . . . AA 24 160.374 151.207 169.965 1 117.33 ? C8 LHG 409 A 1 HETATM 18 C C9 LHG . . . AA 24 160.194 152.71 169.777 1 117.33 ? C9 LHG 409 A 1 HETATM 19 C C10 LHG . . . AA 24 160.428 153.458 171.082 1 117.33 ? C10 LHG 409 A 1 HETATM 20 O O8 LHG . . . AA 24 162.498 147.362 168.376 1 117.33 ? O8 LHG 409 A 1 HETATM 21 C C23 LHG . . . AA 24 162.137 146.093 167.987 1 117.33 ? C23 LHG 409 A 1 HETATM 22 O O10 LHG . . . AA 24 162.605 145.119 168.563 1 117.33 ? O10 LHG 409 A 1 HETATM 23 C C24 LHG . . . AA 24 161.384 145.938 166.667 1 117.33 ? C24 LHG 409 A 1 HETATM 24 C C11 LHG . . . AA 24 161.04 154.809 170.692 1 117.33 ? C11 LHG 409 A 1 HETATM 25 C C12 LHG . . . AA 24 160.204 155.62 169.703 1 117.33 ? C12 LHG 409 A 1 HETATM 26 C C13 LHG . . . AA 24 158.967 156.258 170.342 1 117.33 ? C13 LHG 409 A 1 HETATM 27 C C14 LHG . . . AA 24 157.675 155.466 170.073 1 117.33 ? C14 LHG 409 A 1 HETATM 28 C C15 LHG . . . AA 24 156.868 156.007 168.865 1 117.33 ? C15 LHG 409 A 1 HETATM 29 C C16 LHG . . . AA 24 157.584 155.913 167.522 1 117.33 ? C16 LHG 409 A 1 HETATM 30 C C17 LHG . . . AA 24 157.818 154.498 166.943 1 117.33 ? C17 LHG 409 A 1 HETATM 31 C C18 LHG . . . AA 24 156.594 153.627 167.125 1 117.33 ? C18 LHG 409 A 1 HETATM 32 C C19 LHG . . . AA 24 155.241 154.024 166.487 1 117.33 ? C19 LHG 409 A 1 HETATM 33 C C20 LHG . . . AA 24 155.362 154.501 164.994 1 117.33 ? C20 LHG 409 A 1 HETATM 34 C C21 LHG . . . AA 24 156.05 153.525 164.046 1 117.33 ? C21 LHG 409 A 1 HETATM 35 C C22 LHG . . . AA 24 155.766 153.85 162.562 1 117.33 ? C22 LHG 409 A 1 HETATM 36 C C25 LHG . . . AA 24 160.389 144.773 166.485 1 117.33 ? C25 LHG 409 A 1 HETATM 37 C C26 LHG . . . AA 24 159.162 144.713 167.445 1 117.33 ? C26 LHG 409 A 1 HETATM 38 C C27 LHG . . . AA 24 157.873 145.082 166.695 1 117.33 ? C27 LHG 409 A 1 HETATM 39 C C28 LHG . . . AA 24 157.501 146.556 166.632 1 117.33 ? C28 LHG 409 A 1 HETATM 40 C C29 LHG . . . AA 24 156.889 147.026 167.969 1 117.33 ? C29 LHG 409 A 1 HETATM 41 C C30 LHG . . . AA 24 157.043 148.517 168.285 1 117.33 ? C30 LHG 409 A 1 HETATM 42 C C31 LHG . . . AA 24 156.198 149.064 169.443 1 117.33 ? C31 LHG 409 A 1 HETATM 43 C C32 LHG . . . AA 24 156.136 150.596 169.576 1 117.33 ? C32 LHG 409 A 1 HETATM 44 C C33 LHG . . . AA 24 154.926 151.012 170.441 1 117.33 ? C33 LHG 409 A 1 HETATM 45 C C34 LHG . . . AA 24 154.606 152.503 170.369 1 117.33 ? C34 LHG 409 A 1 HETATM 46 C C35 LHG . . . AA 24 153.459 153.002 171.272 1 117.33 ? C35 LHG 409 A 1 HETATM 47 C C36 LHG . . . AA 24 152.164 152.174 171.135 1 117.33 ? C36 LHG 409 A 1 HETATM 48 C C37 LHG . . . AA 24 151.641 152.224 169.737 1 117.33 ? C37 LHG 409 A 1 HETATM 49 C C38 LHG . . . AA 24 151.469 153.608 169.159 1 117.33 ? C38 LHG 409 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 49 #