data_7NHP # _model_server_result.job_id 0jtZtCEVtYP6GrXoaAsnQQ _model_server_result.datetime_utc '2024-11-04 23:32:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nhp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VB","auth_seq_id":410}' # _entry.id 7NHP # _exptl.entry_id 7NHP _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 536.873 _entity.id 23 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NHP _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 23 Z N N ? 23 RA N N ? 23 SA N N ? 23 TA N N ? 23 IB N N ? 23 JB N N ? 23 LB N N ? 23 VB N N ? 23 XB N N ? 23 ZB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 215 A HIS 215 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc2 A NE2 HIS 272 A HIS 272 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc3 D NE2 HIS 214 D HIS 214 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc4 D OE2 GLU 241 D GLU 241 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc5 D NE2 HIS 268 D HIS 268 1_555 MB FE FE . D FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc6 E NE2 HIS 23 E HIS 23 1_555 WB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BCR sing 70 n n C1 C6 BCR sing 71 n n C1 C31 BCR sing 72 n n C1 C32 BCR sing 73 n n C2 C3 BCR sing 74 n n C2 HC21 BCR sing 75 n n C2 HC22 BCR sing 76 n n C3 C4 BCR sing 77 n n C3 HC31 BCR sing 78 n n C3 HC32 BCR sing 79 n n C4 C5 BCR sing 80 n n C4 HC41 BCR sing 81 n n C4 HC42 BCR sing 82 n n C5 C6 BCR doub 83 n n C5 C33 BCR sing 84 n n C6 C7 BCR sing 85 n n C7 C8 BCR doub 86 e n C7 HC7 BCR sing 87 n n C8 C9 BCR sing 88 n n C8 HC8 BCR sing 89 n n C9 C10 BCR doub 90 e n C9 C34 BCR sing 91 n n C10 C11 BCR sing 92 n n C10 H10C BCR sing 93 n n C11 C12 BCR doub 94 e n C11 H11C BCR sing 95 n n C33 H331 BCR sing 96 n n C33 H332 BCR sing 97 n n C33 H333 BCR sing 98 n n C31 H311 BCR sing 99 n n C31 H312 BCR sing 100 n n C31 H313 BCR sing 101 n n C32 H321 BCR sing 102 n n C32 H322 BCR sing 103 n n C32 H323 BCR sing 104 n n C34 H341 BCR sing 105 n n C34 H342 BCR sing 106 n n C34 H343 BCR sing 107 n n C12 C13 BCR sing 108 n n C12 H12C BCR sing 109 n n C13 C14 BCR doub 110 e n C13 C35 BCR sing 111 n n C14 C15 BCR sing 112 n n C14 H14C BCR sing 113 n n C15 C16 BCR doub 114 e n C15 H15C BCR sing 115 n n C16 C17 BCR sing 116 n n C16 H16C BCR sing 117 n n C17 C18 BCR doub 118 e n C17 H17C BCR sing 119 n n C18 C19 BCR sing 120 n n C18 C36 BCR sing 121 n n C19 C20 BCR doub 122 e n C19 H19C BCR sing 123 n n C20 C21 BCR sing 124 n n C20 H20C BCR sing 125 n n C21 C22 BCR doub 126 e n C21 H21C BCR sing 127 n n C22 C23 BCR sing 128 n n C22 C37 BCR sing 129 n n C23 C24 BCR doub 130 e n C23 H23C BCR sing 131 n n C24 C25 BCR sing 132 n n C24 H24C BCR sing 133 n n C25 C26 BCR doub 134 n n C25 C30 BCR sing 135 n n C26 C27 BCR sing 136 n n C26 C38 BCR sing 137 n n C27 C28 BCR sing 138 n n C27 H271 BCR sing 139 n n C27 H272 BCR sing 140 n n C28 C29 BCR sing 141 n n C28 H281 BCR sing 142 n n C28 H282 BCR sing 143 n n C29 C30 BCR sing 144 n n C29 H291 BCR sing 145 n n C29 H292 BCR sing 146 n n C30 C39 BCR sing 147 n n C30 C40 BCR sing 148 n n C35 H351 BCR sing 149 n n C35 H352 BCR sing 150 n n C35 H353 BCR sing 151 n n C36 H361 BCR sing 152 n n C36 H362 BCR sing 153 n n C36 H363 BCR sing 154 n n C37 H371 BCR sing 155 n n C37 H372 BCR sing 156 n n C37 H373 BCR sing 157 n n C38 H381 BCR sing 158 n n C38 H382 BCR sing 159 n n C38 H383 BCR sing 160 n n C39 H391 BCR sing 161 n n C39 H392 BCR sing 162 n n C39 H393 BCR sing 163 n n C40 H401 BCR sing 164 n n C40 H402 BCR sing 165 n n C40 H403 BCR sing 166 n n # _atom_sites.entry_id 7NHP _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 19 MN A 1 401 401 MN MN . T 20 CL A 1 402 403 CL CL . U 21 PHO A 1 403 365 PHO PHO . V 22 CLA A 1 404 362 CLA CLA . W 22 CLA A 1 405 363 CLA CLA . X 22 CLA A 1 406 364 CLA CLA . Y 22 CLA A 1 407 366 CLA CLA . Z 23 BCR A 1 408 369 BCR BCR . AA 24 LHG A 1 409 371 LHG LHG . BA 22 CLA B 1 601 511 CLA CLA . CA 22 CLA B 1 602 512 CLA CLA . DA 22 CLA B 1 603 513 CLA CLA . EA 22 CLA B 1 604 514 CLA CLA . FA 22 CLA B 1 605 515 CLA CLA . GA 22 CLA B 1 606 516 CLA CLA . HA 22 CLA B 1 607 517 CLA CLA . IA 22 CLA B 1 608 518 CLA CLA . JA 22 CLA B 1 609 519 CLA CLA . KA 22 CLA B 1 610 520 CLA CLA . LA 22 CLA B 1 611 521 CLA CLA . MA 22 CLA B 1 612 522 CLA CLA . NA 22 CLA B 1 613 523 CLA CLA . OA 22 CLA B 1 614 524 CLA CLA . PA 22 CLA B 1 615 525 CLA CLA . QA 22 CLA B 1 616 526 CLA CLA . RA 23 BCR B 1 617 527 BCR BCR . SA 23 BCR B 1 618 529 BCR BCR . TA 23 BCR B 1 619 530 BCR BCR . UA 25 LMG C 1 501 482 LMG LMG . VA 25 LMG C 1 502 492 LMG LMG . WA 22 CLA C 1 503 465 CLA CLA . XA 22 CLA C 1 504 466 CLA CLA . YA 22 CLA C 1 505 467 CLA CLA . ZA 22 CLA C 1 506 468 CLA CLA . AB 22 CLA C 1 507 469 CLA CLA . BB 22 CLA C 1 508 470 CLA CLA . CB 22 CLA C 1 509 471 CLA CLA . DB 22 CLA C 1 510 472 CLA CLA . EB 22 CLA C 1 511 473 CLA CLA . FB 22 CLA C 1 512 474 CLA CLA . GB 22 CLA C 1 513 475 CLA CLA . HB 22 CLA C 1 514 476 CLA CLA . IB 23 BCR C 1 515 477 BCR BCR . JB 23 BCR C 1 516 478 BCR BCR . KB 22 CLA C 1 517 483 CLA CLA . LB 23 BCR C 1 518 116 BCR BCR . MB 26 FE D 1 401 361 FE FE . NB 25 LMG D 1 402 373 LMG LMG . OB 25 LMG D 1 403 531 LMG LMG . PB 25 LMG D 1 404 359 LMG LMG . QB 25 LMG D 1 405 360 LMG LMG . RB 27 PL9 D 1 406 357 PL9 PL9 . SB 21 PHO D 1 407 355 PHO PHO . TB 22 CLA D 1 408 354 CLA CLA . UB 22 CLA D 1 409 356 CLA CLA . VB 23 BCR D 1 410 358 BCR BCR . WB 28 HEM E 1 101 85 HEM HEM . XB 23 BCR H 1 101 98 BCR BCR . YB 25 LMG I 1 101 220 LMG LMG . ZB 23 BCR K 1 101 112 BCR BCR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . VB 23 144.074 172.002 133.194 1 107.57 ? C1 BCR 410 D 1 HETATM 2 C C2 BCR . . . VB 23 143.178 171.78 131.982 1 107.57 ? C2 BCR 410 D 1 HETATM 3 C C3 BCR . . . VB 23 141.715 171.929 132.294 1 107.57 ? C3 BCR 410 D 1 HETATM 4 C C4 BCR . . . VB 23 141.275 171.147 133.509 1 107.57 ? C4 BCR 410 D 1 HETATM 5 C C5 BCR . . . VB 23 142.312 171.001 134.556 1 107.57 ? C5 BCR 410 D 1 HETATM 6 C C6 BCR . . . VB 23 143.563 171.395 134.441 1 107.57 ? C6 BCR 410 D 1 HETATM 7 C C7 BCR . . . VB 23 144.532 171.193 135.513 1 107.57 ? C7 BCR 410 D 1 HETATM 8 C C8 BCR . . . VB 23 144.66 172.013 136.559 1 107.57 ? C8 BCR 410 D 1 HETATM 9 C C9 BCR . . . VB 23 145.667 171.791 137.589 1 107.57 ? C9 BCR 410 D 1 HETATM 10 C C10 BCR . . . VB 23 145.411 172.125 138.875 1 107.57 ? C10 BCR 410 D 1 HETATM 11 C C11 BCR . . . VB 23 146.277 171.977 140.037 1 107.57 ? C11 BCR 410 D 1 HETATM 12 C C33 BCR . . . VB 23 141.838 170.385 135.807 1 107.57 ? C33 BCR 410 D 1 HETATM 13 C C31 BCR . . . VB 23 144.252 173.49 133.417 1 107.57 ? C31 BCR 410 D 1 HETATM 14 C C32 BCR . . . VB 23 145.42 171.38 132.878 1 107.57 ? C32 BCR 410 D 1 HETATM 15 C C34 BCR . . . VB 23 146.939 171.225 137.097 1 107.57 ? C34 BCR 410 D 1 HETATM 16 C C12 BCR . . . VB 23 145.752 172.011 141.286 1 107.57 ? C12 BCR 410 D 1 HETATM 17 C C13 BCR . . . VB 23 146.464 171.755 142.536 1 107.57 ? C13 BCR 410 D 1 HETATM 18 C C14 BCR . . . VB 23 145.852 171.934 143.734 1 107.57 ? C14 BCR 410 D 1 HETATM 19 C C15 BCR . . . VB 23 146.438 171.758 145.057 1 107.57 ? C15 BCR 410 D 1 HETATM 20 C C16 BCR . . . VB 23 145.692 171.621 146.181 1 107.57 ? C16 BCR 410 D 1 HETATM 21 C C17 BCR . . . VB 23 146.321 171.224 147.431 1 107.57 ? C17 BCR 410 D 1 HETATM 22 C C18 BCR . . . VB 23 145.871 171.359 148.699 1 107.57 ? C18 BCR 410 D 1 HETATM 23 C C19 BCR . . . VB 23 146.721 170.895 149.803 1 107.57 ? C19 BCR 410 D 1 HETATM 24 C C20 BCR . . . VB 23 146.36 170.847 151.099 1 107.57 ? C20 BCR 410 D 1 HETATM 25 C C21 BCR . . . VB 23 147.261 170.307 152.108 1 107.57 ? C21 BCR 410 D 1 HETATM 26 C C22 BCR . . . VB 23 147.109 170.385 153.446 1 107.57 ? C22 BCR 410 D 1 HETATM 27 C C23 BCR . . . VB 23 147.924 169.523 154.31 1 107.57 ? C23 BCR 410 D 1 HETATM 28 C C24 BCR . . . VB 23 147.408 168.556 155.077 1 107.57 ? C24 BCR 410 D 1 HETATM 29 C C25 BCR . . . VB 23 148.145 167.512 155.789 1 107.57 ? C25 BCR 410 D 1 HETATM 30 C C26 BCR . . . VB 23 148.727 166.488 155.152 1 107.57 ? C26 BCR 410 D 1 HETATM 31 C C27 BCR . . . VB 23 149.458 165.366 155.81 1 107.57 ? C27 BCR 410 D 1 HETATM 32 C C28 BCR . . . VB 23 149.511 165.459 157.322 1 107.57 ? C28 BCR 410 D 1 HETATM 33 C C29 BCR . . . VB 23 148.33 166.213 157.874 1 107.57 ? C29 BCR 410 D 1 HETATM 34 C C30 BCR . . . VB 23 148.217 167.599 157.281 1 107.57 ? C30 BCR 410 D 1 HETATM 35 C C35 BCR . . . VB 23 147.781 171.099 142.433 1 107.57 ? C35 BCR 410 D 1 HETATM 36 C C36 BCR . . . VB 23 144.485 171.771 149.015 1 107.57 ? C36 BCR 410 D 1 HETATM 37 C C37 BCR . . . VB 23 145.961 171.11 154.037 1 107.57 ? C37 BCR 410 D 1 HETATM 38 C C38 BCR . . . VB 23 148.702 166.382 153.669 1 107.57 ? C38 BCR 410 D 1 HETATM 39 C C39 BCR . . . VB 23 149.421 168.459 157.67 1 107.57 ? C39 BCR 410 D 1 HETATM 40 C C40 BCR . . . VB 23 146.975 168.214 157.921 1 107.57 ? C40 BCR 410 D 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 40 #