data_7NHQ
#
_model_server_result.job_id            m-qlWIhcH_XorBBYWpkajw 
_model_server_result.datetime_utc      '2025-03-24 13:48:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nhq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"SB","auth_seq_id":101}' 
#
_entry.id    7NHQ 
#
_exptl.entry_id    7NHQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          27 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NHQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NHQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptadecameric 
_pdbx_struct_assembly.oligomeric_count      17 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      27 
_struct_asym.id                             SB 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 170 A ASP 170 1_555 S MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
metalc ? metalc2 A NE2 HIS 215 A HIS 215 1_555 R FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 ? 
metalc ? metalc3 A NE2 HIS 272 A HIS 272 1_555 R FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc4 R FE FE . A FE 401 1_555 D NE2 HIS 214 D HIS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? 
metalc ? metalc5 R FE FE . A FE 401 1_555 D OE2 GLU 241 D GLU 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc6 BB MG CLA . C CLA 510 1_555 IB O1A CLA . C CLA 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? 
metalc ? metalc7 E NE2 HIS 23 E HIS 23 1_555 SB FE HEM . E HEM 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? 
metalc ? metalc8 SB FE HEM . E HEM 101 1_555 F NE2 HIS 24 F HIS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 371 n n 
CHA C4D HEM doub 372 n n 
CHA HHA HEM sing 373 n n 
CHB C4A HEM sing 374 n n 
CHB C1B HEM doub 375 n n 
CHB HHB HEM sing 376 n n 
CHC C4B HEM sing 377 n n 
CHC C1C HEM doub 378 n n 
CHC HHC HEM sing 379 n n 
CHD C4C HEM doub 380 n n 
CHD C1D HEM sing 381 n n 
CHD HHD HEM sing 382 n n 
C1A C2A HEM doub 383 n y 
C1A NA HEM sing 384 n y 
C2A C3A HEM sing 385 n y 
C2A CAA HEM sing 386 n n 
C3A C4A HEM doub 387 n y 
C3A CMA HEM sing 388 n n 
C4A NA HEM sing 389 n y 
CMA HMA HEM sing 390 n n 
CMA HMAA HEM sing 391 n n 
CMA HMAB HEM sing 392 n n 
CAA CBA HEM sing 393 n n 
CAA HAA HEM sing 394 n n 
CAA HAAA HEM sing 395 n n 
CBA CGA HEM sing 396 n n 
CBA HBA HEM sing 397 n n 
CBA HBAA HEM sing 398 n n 
CGA O1A HEM doub 399 n n 
CGA O2A HEM sing 400 n n 
C1B C2B HEM sing 401 n n 
C1B NB HEM sing 402 n n 
C2B C3B HEM doub 403 n n 
C2B CMB HEM sing 404 n n 
C3B C4B HEM sing 405 n n 
C3B CAB HEM sing 406 n n 
C4B NB HEM doub 407 n n 
CMB HMB HEM sing 408 n n 
CMB HMBA HEM sing 409 n n 
CMB HMBB HEM sing 410 n n 
CAB CBB HEM doub 411 n n 
CAB HAB HEM sing 412 n n 
CBB HBB HEM sing 413 n n 
CBB HBBA HEM sing 414 n n 
C1C C2C HEM sing 415 n y 
C1C NC HEM sing 416 n y 
C2C C3C HEM doub 417 n y 
C2C CMC HEM sing 418 n n 
C3C C4C HEM sing 419 n y 
C3C CAC HEM sing 420 n n 
C4C NC HEM sing 421 n y 
CMC HMC HEM sing 422 n n 
CMC HMCA HEM sing 423 n n 
CMC HMCB HEM sing 424 n n 
CAC CBC HEM doub 425 n n 
CAC HAC HEM sing 426 n n 
CBC HBC HEM sing 427 n n 
CBC HBCA HEM sing 428 n n 
C1D C2D HEM sing 429 n n 
C1D ND HEM doub 430 n n 
C2D C3D HEM doub 431 n n 
C2D CMD HEM sing 432 n n 
C3D C4D HEM sing 433 n n 
C3D CAD HEM sing 434 n n 
C4D ND HEM sing 435 n n 
CMD HMD HEM sing 436 n n 
CMD HMDA HEM sing 437 n n 
CMD HMDB HEM sing 438 n n 
CAD CBD HEM sing 439 n n 
CAD HAD HEM sing 440 n n 
CAD HADA HEM sing 441 n n 
CBD CGD HEM sing 442 n n 
CBD HBD HEM sing 443 n n 
CBD HBDA HEM sing 444 n n 
CGD O1D HEM doub 445 n n 
CGD O2D HEM sing 446 n n 
O2A H2A HEM sing 447 n n 
O2D H2D HEM sing 448 n n 
FE NA HEM sing 449 n n 
FE NB HEM sing 450 n n 
FE NC HEM sing 451 n n 
FE ND HEM sing 452 n n 
#
_atom_sites.entry_id                     7NHQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
R 18 FE A 1 401 361 FE FE . 
S 19 MN A 1 402 401 MN MN . 
T 20 CL A 1 403 403 CL CL . 
U 21 PHO A 1 404 365 PHO PHO . 
V 22 CLA A 1 405 362 CLA CLA . 
W 22 CLA A 1 406 366 CLA CLA . 
X 23 BCR A 1 407 369 BCR BCR . 
Y 24 LHG A 1 408 371 LHG LHG . 
Z 22 CLA B 1 601 511 CLA CLA . 
AA 22 CLA B 1 602 512 CLA CLA . 
BA 22 CLA B 1 603 513 CLA CLA . 
CA 22 CLA B 1 604 514 CLA CLA . 
DA 22 CLA B 1 605 515 CLA CLA . 
EA 22 CLA B 1 606 516 CLA CLA . 
FA 22 CLA B 1 607 517 CLA CLA . 
GA 22 CLA B 1 608 518 CLA CLA . 
HA 22 CLA B 1 609 519 CLA CLA . 
IA 22 CLA B 1 610 520 CLA CLA . 
JA 22 CLA B 1 611 521 CLA CLA . 
KA 22 CLA B 1 612 522 CLA CLA . 
LA 22 CLA B 1 613 523 CLA CLA . 
MA 22 CLA B 1 614 524 CLA CLA . 
NA 22 CLA B 1 615 525 CLA CLA . 
OA 22 CLA B 1 616 526 CLA CLA . 
PA 23 BCR B 1 617 527 BCR BCR . 
QA 23 BCR B 1 618 529 BCR BCR . 
RA 23 BCR B 1 619 530 BCR BCR . 
SA 25 LMG C 1 501 482 LMG LMG . 
TA 25 LMG C 1 502 492 LMG LMG . 
UA 22 CLA C 1 503 465 CLA CLA . 
VA 22 CLA C 1 504 466 CLA CLA . 
WA 22 CLA C 1 505 467 CLA CLA . 
XA 22 CLA C 1 506 468 CLA CLA . 
YA 22 CLA C 1 507 469 CLA CLA . 
ZA 22 CLA C 1 508 470 CLA CLA . 
AB 22 CLA C 1 509 471 CLA CLA . 
BB 22 CLA C 1 510 472 CLA CLA . 
CB 22 CLA C 1 511 473 CLA CLA . 
DB 22 CLA C 1 512 474 CLA CLA . 
EB 22 CLA C 1 513 475 CLA CLA . 
FB 22 CLA C 1 514 476 CLA CLA . 
GB 23 BCR C 1 515 477 BCR BCR . 
HB 23 BCR C 1 516 478 BCR BCR . 
IB 22 CLA C 1 517 483 CLA CLA . 
JB 23 BCR C 1 518 116 BCR BCR . 
KB 22 CLA D 1 401 363 CLA CLA . 
LB 22 CLA D 1 402 364 CLA CLA . 
MB 25 LMG D 1 403 531 LMG LMG . 
NB 25 LMG D 1 404 360 LMG LMG . 
OB 26 PL9 D 1 405 357 PL9 PL9 . 
PB 21 PHO D 1 406 355 PHO PHO . 
QB 22 CLA D 1 407 354 CLA CLA . 
RB 22 CLA D 1 408 356 CLA CLA . 
SB 27 HEM E 1 101 85 HEM HEM . 
TB 25 LMG F 1 101 359 LMG LMG . 
UB 23 BCR F 1 102 358 BCR BCR . 
VB 23 BCR H 1 101 98 BCR BCR . 
WB 25 LMG I 1 101 220 LMG LMG . 
XB 23 BCR K 1 101 112 BCR BCR . 
YB 25 LMG 3 1 101 373 LMG LMG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . SB 27 161.474 182.379 144.391 1 147.61 ? CHA HEM 101 E 1 
HETATM 2 C CHB HEM . . . SB 27 158.416 185.765 142.927 1 147.61 ? CHB HEM 101 E 1 
HETATM 3 C CHC HEM . . . SB 27 154.916 183.044 144.755 1 147.61 ? CHC HEM 101 E 1 
HETATM 4 C CHD HEM . . . SB 27 158.103 180.474 147.252 1 147.61 ? CHD HEM 101 E 1 
HETATM 5 C C1A HEM . . . SB 27 160.954 183.468 143.769 1 147.61 ? C1A HEM 101 E 1 
HETATM 6 C C2A HEM . . . SB 27 161.696 184.349 142.908 1 147.61 ? C2A HEM 101 E 1 
HETATM 7 C C3A HEM . . . SB 27 160.864 185.289 142.488 1 147.61 ? C3A HEM 101 E 1 
HETATM 8 C C4A HEM . . . SB 27 159.568 185.045 143.089 1 147.61 ? C4A HEM 101 E 1 
HETATM 9 C CMA HEM . . . SB 27 161.27 186.448 141.565 1 147.61 ? CMA HEM 101 E 1 
HETATM 10 C CAA HEM . . . SB 27 163.176 184.199 142.5 1 147.61 ? CAA HEM 101 E 1 
HETATM 11 C CBA HEM . . . SB 27 164.114 184.967 143.413 1 147.61 ? CBA HEM 101 E 1 
HETATM 12 C CGA HEM . . . SB 27 165.44 185.153 142.723 1 147.61 ? CGA HEM 101 E 1 
HETATM 13 O O1A HEM . . . SB 27 165.984 184.16 142.172 1 147.61 ? O1A HEM 101 E 1 
HETATM 14 O O2A HEM . . . SB 27 165.958 186.3 142.736 1 147.61 ? O2A HEM 101 E 1 
HETATM 15 C C1B HEM . . . SB 27 157.184 185.203 143.128 1 147.61 ? C1B HEM 101 E 1 
HETATM 16 C C2B HEM . . . SB 27 155.969 185.482 142.396 1 147.61 ? C2B HEM 101 E 1 
HETATM 17 C C3B HEM . . . SB 27 155.008 184.714 142.917 1 147.61 ? C3B HEM 101 E 1 
HETATM 18 C C4B HEM . . . SB 27 155.593 183.933 143.974 1 147.61 ? C4B HEM 101 E 1 
HETATM 19 C CMB HEM . . . SB 27 155.857 186.51 141.253 1 147.61 ? CMB HEM 101 E 1 
HETATM 20 C CAB HEM . . . SB 27 153.521 184.594 142.533 1 147.61 ? CAB HEM 101 E 1 
HETATM 21 C CBB HEM . . . SB 27 152.992 185.27 141.515 1 147.61 ? CBB HEM 101 E 1 
HETATM 22 C C1C HEM . . . SB 27 155.464 182.19 145.664 1 147.61 ? C1C HEM 101 E 1 
HETATM 23 C C2C HEM . . . SB 27 154.726 181.402 146.62 1 147.61 ? C2C HEM 101 E 1 
HETATM 24 C C3C HEM . . . SB 27 155.613 180.697 147.321 1 147.61 ? C3C HEM 101 E 1 
HETATM 25 C C4C HEM . . . SB 27 156.922 180.999 146.805 1 147.61 ? C4C HEM 101 E 1 
HETATM 26 C CMC HEM . . . SB 27 153.202 181.466 146.817 1 147.61 ? CMC HEM 101 E 1 
HETATM 27 C CAC HEM . . . SB 27 155.414 179.671 148.449 1 147.61 ? CAC HEM 101 E 1 
HETATM 28 C CBC HEM . . . SB 27 154.278 178.991 148.644 1 147.61 ? CBC HEM 101 E 1 
HETATM 29 C C1D HEM . . . SB 27 159.296 180.714 146.627 1 147.61 ? C1D HEM 101 E 1 
HETATM 30 C C2D HEM . . . SB 27 160.518 179.957 146.774 1 147.61 ? C2D HEM 101 E 1 
HETATM 31 C C3D HEM . . . SB 27 161.442 180.487 145.976 1 147.61 ? C3D HEM 101 E 1 
HETATM 32 C C4D HEM . . . SB 27 160.831 181.6 145.305 1 147.61 ? C4D HEM 101 E 1 
HETATM 33 C CMD HEM . . . SB 27 160.706 178.75 147.702 1 147.61 ? CMD HEM 101 E 1 
HETATM 34 C CAD HEM . . . SB 27 162.908 180.037 145.771 1 147.61 ? CAD HEM 101 E 1 
HETATM 35 C CBD HEM . . . SB 27 163.008 178.962 144.682 1 147.61 ? CBD HEM 101 E 1 
HETATM 36 C CGD HEM . . . SB 27 164.452 178.578 144.475 1 147.61 ? CGD HEM 101 E 1 
HETATM 37 O O1D HEM . . . SB 27 165.005 178.834 143.373 1 147.61 ? O1D HEM 101 E 1 
HETATM 38 O O2D HEM . . . SB 27 165.06 178.02 145.422 1 147.61 ? O2D HEM 101 E 1 
HETATM 39 N NA HEM . . . SB 27 159.658 183.915 143.869 1 147.61 ? NA HEM 101 E 1 
HETATM 40 N NB HEM . . . SB 27 156.921 184.251 144.084 1 147.61 ? NB HEM 101 E 1 
HETATM 41 N NC HEM . . . SB 27 156.802 181.922 145.797 1 147.61 ? NC HEM 101 E 1 
HETATM 42 N ND HEM . . . SB 27 159.52 181.717 145.713 1 147.61 ? ND HEM 101 E 1 
HETATM 43 FE FE HEM . . . SB 27 158.222 183.093 145.047 1 147.61 ? FE HEM 101 E 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           412 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#