data_7NI5
#
_model_server_result.job_id            Kh8VEmgOXHp62VHm8lUddQ 
_model_server_result.datetime_utc      '2025-03-13 19:24:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ni5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":3101}' 
#
_entry.id    7NI5 
#
_exptl.entry_id    7NI5 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              395.495 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NI5 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NI5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 663 A CYS 633 1_555 E ZN ZN . A ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc2 A ND1 HIS 666 A HIS 636 1_555 E ZN ZN . A ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc3 A SG CYS 820 A CYS 790 1_555 E ZN ZN . A ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc4 A NE2 HIS 1906 A HIS 1876 1_555 D ZN ZN . A ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc5 A ND1 HIS 1925 A HIS 1895 1_555 D ZN ZN . A ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc6 A NE2 HIS 1925 A HIS 1895 1_555 D ZN ZN . A ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc7 A SG CYS 1929 A CYS 1899 1_555 D ZN ZN . A ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc8 A SG CYS 1930 A CYS 1900 1_555 D ZN ZN . A ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc9 B SG CYS 663 B CYS 633 1_555 H ZN ZN . B ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc10 B ND1 HIS 666 B HIS 636 1_555 H ZN ZN . B ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc11 B SG CYS 820 B CYS 790 1_555 H ZN ZN . B ZN 3103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc12 B NE2 HIS 1906 B HIS 1876 1_555 G ZN ZN . B ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc13 B ND1 HIS 1925 B HIS 1895 1_555 G ZN ZN . B ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc14 B SG CYS 1929 B CYS 1899 1_555 G ZN ZN . B ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc15 B SG CYS 1930 B CYS 1900 1_555 G ZN ZN . B ZN 3102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
#
_chem_comp.formula           'C21 H17 N O3 S2' 
_chem_comp.formula_weight    395.495 
_chem_comp.id                UF8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     2-morpholino-6-(thianthren-1-yl)-4H-pyran-4-one 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O11 C10 UF8 sing 356 n n 
O11 C12 UF8 sing 357 n n 
C10 C9 UF8 sing 358 n n 
C12 C13 UF8 sing 359 n n 
C9 N8 UF8 sing 360 n n 
C13 N8 UF8 sing 361 n n 
N8 C6 UF8 sing 362 n n 
C23 C24 UF8 doub 363 n y 
C23 C22 UF8 sing 364 n y 
C6 C7 UF8 doub 365 n n 
C6 O5 UF8 sing 366 n n 
C24 C25 UF8 sing 367 n y 
C7 C2 UF8 sing 368 n n 
C22 C21 UF8 doub 369 n y 
O5 C4 UF8 sing 370 n n 
C25 S26 UF8 sing 371 n n 
C25 C20 UF8 doub 372 n y 
C2 O1 UF8 doub 373 n n 
C2 C3 UF8 sing 374 n n 
S26 C27 UF8 sing 375 n n 
C21 C20 UF8 sing 376 n y 
C4 C3 UF8 doub 377 n n 
C4 C14 UF8 sing 378 n n 
C20 S19 UF8 sing 379 n n 
C14 C27 UF8 doub 380 n y 
C14 C15 UF8 sing 381 n y 
C27 C18 UF8 sing 382 n y 
C15 C16 UF8 doub 383 n y 
C18 S19 UF8 sing 384 n n 
C18 C17 UF8 doub 385 n y 
C16 C17 UF8 sing 386 n y 
C3 H1 UF8 sing 387 n n 
C7 H2 UF8 sing 388 n n 
C9 H3 UF8 sing 389 n n 
C9 H4 UF8 sing 390 n n 
C10 H5 UF8 sing 391 n n 
C10 H6 UF8 sing 392 n n 
C12 H7 UF8 sing 393 n n 
C12 H8 UF8 sing 394 n n 
C13 H9 UF8 sing 395 n n 
C13 H10 UF8 sing 396 n n 
C15 H11 UF8 sing 397 n n 
C16 H12 UF8 sing 398 n n 
C21 H13 UF8 sing 399 n n 
C22 H14 UF8 sing 400 n n 
C24 H15 UF8 sing 401 n n 
C17 H16 UF8 sing 402 n n 
C23 H17 UF8 sing 403 n n 
#
_atom_sites.entry_id                     7NI5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 UF8 A 1 3101 3101 UF8 INH . 
D 3 ZN A 1 3102 3201 ZN ZN . 
E 3 ZN A 1 3103 3301 ZN ZN . 
F 2 UF8 B 1 3101 3101 UF8 INH . 
G 3 ZN B 1 3102 3201 ZN ZN . 
H 3 ZN B 1 3103 3301 ZN ZN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 UF8 . . . F 2 148.129 217.453 218.614 1 39.77 ? C2 UF8 3101 B 1 
HETATM 2 C C3 UF8 . . . F 2 147.675 218.783 218.401 1 39.77 ? C3 UF8 3101 B 1 
HETATM 3 O O5 UF8 . . . F 2 149.699 219.339 217.391 1 39.77 ? O5 UF8 3101 B 1 
HETATM 4 C C7 UF8 . . . F 2 149.439 217.135 218.162 1 39.77 ? C7 UF8 3101 B 1 
HETATM 5 C C9 UF8 . . . F 2 152.158 216.55 217.169 1 39.77 ? C9 UF8 3101 B 1 
HETATM 6 C C10 UF8 . . . F 2 153.012 216.199 215.955 1 39.77 ? C10 UF8 3101 B 1 
HETATM 7 C C12 UF8 . . . F 2 153.222 218.393 215.319 1 39.77 ? C12 UF8 3101 B 1 
HETATM 8 C C13 UF8 . . . F 2 152.37 218.887 216.483 1 39.77 ? C13 UF8 3101 B 1 
HETATM 9 C C14 UF8 . . . F 2 148.042 221.127 217.538 1 39.77 ? C14 UF8 3101 B 1 
HETATM 10 C C15 UF8 . . . F 2 147.48 221.845 218.583 1 39.77 ? C15 UF8 3101 B 1 
HETATM 11 C C16 UF8 . . . F 2 147.06 223.156 218.385 1 39.77 ? C16 UF8 3101 B 1 
HETATM 12 C C20 UF8 . . . F 2 149.495 223.234 213.634 1 39.77 ? C20 UF8 3101 B 1 
HETATM 13 C C21 UF8 . . . F 2 150.243 224.099 212.83 1 39.77 ? C21 UF8 3101 B 1 
HETATM 14 C C22 UF8 . . . F 2 151.403 223.641 212.222 1 39.77 ? C22 UF8 3101 B 1 
HETATM 15 C C24 UF8 . . . F 2 151.078 221.47 213.208 1 39.77 ? C24 UF8 3101 B 1 
HETATM 16 C C27 UF8 . . . F 2 148.187 221.731 216.281 1 39.77 ? C27 UF8 3101 B 1 
HETATM 17 C C17 UF8 . . . F 2 147.202 223.752 217.142 1 39.77 ? C17 UF8 3101 B 1 
HETATM 18 C C18 UF8 . . . F 2 147.769 223.031 216.089 1 39.77 ? C18 UF8 3101 B 1 
HETATM 19 C C23 UF8 . . . F 2 151.819 222.328 212.41 1 39.77 ? C23 UF8 3101 B 1 
HETATM 20 C C25 UF8 . . . F 2 149.911 221.933 213.819 1 39.77 ? C25 UF8 3101 B 1 
HETATM 21 C C4 UF8 . . . F 2 148.504 219.692 217.774 1 39.77 ? C4 UF8 3101 B 1 
HETATM 22 C C6 UF8 . . . F 2 150.169 218.136 217.553 1 39.77 ? C6 UF8 3101 B 1 
HETATM 23 N N8 UF8 . . . F 2 151.511 217.861 217.079 1 39.77 ? N8 UF8 3101 B 1 
HETATM 24 O O1 UF8 . . . F 2 147.322 216.497 219.24 1 39.77 ? O1 UF8 3101 B 1 
HETATM 25 O O11 UF8 . . . F 2 153.886 217.217 215.616 1 39.77 ? O11 UF8 3101 B 1 
HETATM 26 S S19 UF8 . . . F 2 147.966 223.803 214.449 1 39.77 ? S19 UF8 3101 B 1 
HETATM 27 S S26 UF8 . . . F 2 148.921 220.828 214.875 1 39.77 ? S26 UF8 3101 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    50 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           27 
#