data_7NIH # _model_server_result.job_id f8xL72sR7jbaLC608mmjCA _model_server_result.datetime_utc '2024-11-21 14:07:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1001}' # _entry.id 7NIH # _exptl.entry_id 7NIH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NIH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 541 A THR 541 1_555 J MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 I O2B ADP . A ADP 1000 1_555 J MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc3 B OG1 THR 541 B THR 541 1_555 L MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc4 K O2B ADP . B ADP 1000 1_555 L MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc5 C OG1 THR 541 C THR 541 1_555 N MG MG . C MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc6 M O2B ADP . C ADP 1000 1_555 N MG MG . C MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc7 D OG1 THR 541 D THR 541 1_555 P MG MG . D MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc8 O O2B ADP . D ADP 1000 1_555 P MG MG . D MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc9 E OG1 THR 541 E THR 541 1_555 R MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc10 Q O2B ADP . E ADP 1000 1_555 R MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc11 F OG1 THR 541 F THR 541 1_555 T MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc12 S O2B ADP . F ADP 1000 1_555 T MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc13 G OG1 THR 541 G THR 541 1_555 V MG MG . G MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc14 U O2B ADP . G ADP 1000 1_555 V MG MG . G MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc15 H OG1 THR 541 H THR 541 1_555 X MG MG . H MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc16 W O2B ADP . H ADP 1000 1_555 X MG MG . H MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NIH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ADP A 1 1000 1000 ADP ADP . J 3 MG A 1 1001 1001 MG MG . K 2 ADP B 1 1000 1000 ADP ADP . L 3 MG B 1 1001 1001 MG MG . M 2 ADP C 1 1000 1000 ADP ADP . N 3 MG C 1 1001 1001 MG MG . O 2 ADP D 1 1000 1000 ADP ADP . P 3 MG D 1 1001 1001 MG MG . Q 2 ADP E 1 1000 1000 ADP ADP . R 3 MG E 1 1001 1001 MG MG . S 2 ADP F 1 1000 1000 ADP ADP . T 3 MG F 1 1001 1001 MG MG . U 2 ADP G 1 1000 1000 ADP ADP . V 3 MG G 1 1001 1001 MG MG . W 2 ADP H 1 1000 1000 ADP ADP . X 3 MG H 1 1001 1001 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 206.233 _atom_site.Cartn_y 151.529 _atom_site.Cartn_z 193.819 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #