data_7NJN
#
_model_server_result.job_id            7zaX_p9tzeQnGvfaP8XFZw 
_model_server_result.datetime_utc      '2024-10-20 07:33:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7njn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"EA","auth_seq_id":601}' 
#
_entry.id    7NJN 
#
_exptl.entry_id    7NJN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NJN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 7NJN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    eicosameric 
_pdbx_struct_assembly.oligomeric_count      20 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 V N N 
? 10 X N N 
? 10 Z N N 
? 10 BA N N 
? 10 EA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 179 A THR 179 1_555 V MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc2 U O2G ATP . A ATP 600 1_555 V MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc3 U O2B ATP . A ATP 600 1_555 V MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc4 V MG MG . A MG 601 1_555 FA O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc5 V MG MG . A MG 601 1_555 FA O HOH . A HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc6 V MG MG . A MG 601 1_555 FA O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc7 B OG1 THR 179 B THR 179 1_555 X MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc8 W O2G ATP . B ATP 600 1_555 X MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc9 W O2B ATP . B ATP 600 1_555 X MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc10 X MG MG . B MG 601 1_555 GA O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc11 X MG MG . B MG 601 1_555 GA O HOH . B HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc12 X MG MG . B MG 601 1_555 GA O HOH . B HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc13 C OG1 THR 179 C THR 179 1_555 Z MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc14 Y O2G ATP . C ATP 600 1_555 Z MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc15 Y O2B ATP . C ATP 600 1_555 Z MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc16 Z MG MG . C MG 601 1_555 HA O HOH . C HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc17 Z MG MG . C MG 601 1_555 HA O HOH . C HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc18 Z MG MG . C MG 601 1_555 HA O HOH . C HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc19 D OG1 THR 167 D THR 167 1_555 BA MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc20 AA O2B ADP . D ADP 600 1_555 BA MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc21 BA MG MG . D MG 601 1_555 IA O HOH . D HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc22 BA MG MG . D MG 601 1_555 IA O HOH . D HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc23 BA MG MG . D MG 601 1_555 IA O HOH . D HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc24 BA MG MG . D MG 601 1_555 IA O HOH . D HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc25 F OG1 THR 167 F THR 167 1_555 EA MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc26 DA O2G ATP . F ATP 600 1_555 EA MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc27 DA O2B ATP . F ATP 600 1_555 EA MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc28 EA MG MG . F MG 601 1_555 JA O HOH . F HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc29 EA MG MG . F MG 601 1_555 JA O HOH . F HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc30 EA MG MG . F MG 601 1_555 JA O HOH . F HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     7NJN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
U 9 ATP A 1 600 600 ATP ATP . 
V 10 MG A 1 601 601 MG MG . 
W 9 ATP B 1 600 600 ATP ATP . 
X 10 MG B 1 601 601 MG MG . 
Y 9 ATP C 1 600 600 ATP ATP . 
Z 10 MG C 1 601 601 MG MG . 
AA 11 ADP D 1 600 600 ADP ADP . 
BA 10 MG D 1 601 601 MG MG . 
CA 11 ADP E 1 600 600 ADP ADP . 
DA 9 ATP F 1 600 600 ATP ATP . 
EA 10 MG F 1 601 601 MG MG . 
FA 12 HOH A 1 701 701 HOH HOH . 
FA 12 HOH A 2 702 703 HOH HOH . 
FA 12 HOH A 3 703 702 HOH HOH . 
GA 12 HOH B 1 701 702 HOH HOH . 
GA 12 HOH B 2 702 703 HOH HOH . 
GA 12 HOH B 3 703 701 HOH HOH . 
HA 12 HOH C 1 701 701 HOH HOH . 
HA 12 HOH C 2 702 703 HOH HOH . 
HA 12 HOH C 3 703 702 HOH HOH . 
IA 12 HOH D 1 701 702 HOH HOH . 
IA 12 HOH D 2 702 701 HOH HOH . 
IA 12 HOH D 3 703 703 HOH HOH . 
IA 12 HOH D 4 704 704 HOH HOH . 
JA 12 HOH F 1 701 702 HOH HOH . 
JA 12 HOH F 2 702 701 HOH HOH . 
JA 12 HOH F 3 703 703 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         EA 
_atom_site.label_entity_id       10 
_atom_site.Cartn_x               197.545 
_atom_site.Cartn_y               221.92 
_atom_site.Cartn_z               252.265 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        41.41 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           601 
_atom_site.auth_asym_id          F 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    101 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#