data_7NKT
#
_model_server_result.job_id            mNRT5qziCjoa-Pnkkw4nJQ 
_model_server_result.datetime_utc      '2024-11-21 08:33:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nkt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    7NKT 
#
_exptl.entry_id    7NKT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NKT 
_cell.length_a            128.093 
_cell.length_b            128.093 
_cell.length_c            77.676 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NKT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 AAA CYS 336 1_555 A SG CYS 43 AAA CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
disulf ? disulf2 A SG CYS 61 AAA CYS 379 1_555 A SG CYS 114 AAA CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
disulf ? disulf3 A SG CYS 73 AAA CYS 391 1_555 A SG CYS 207 AAA CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 A SG CYS 162 AAA CYS 480 1_555 A SG CYS 170 AAA CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
disulf ? disulf5 B SG CYS 22 BBB CYS 22 1_555 B SG CYS 95 BBB CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
covale ? covale1 A ND2 ASN 25 AAA ASN 343 1_555 C C1 NAG . AAA NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 306 n n 
P O2 PO4 sing 307 n n 
P O3 PO4 sing 308 n n 
P O4 PO4 sing 309 n n 
#
_atom_sites.entry_id                     7NKT 
_atom_sites.fract_transf_matrix[1][1]    0.007807 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012874 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG AAA 1 601 251 NAG NAG . 
D 4 PO4 AAA 1 602 1 PO4 PO4 . 
E 5 PEG BBB 1 201 201 PEG PEG . 
F 5 PEG BBB 1 202 401 PEG PEG . 
G 5 PEG BBB 1 203 501 PEG PEG . 
H 6 HOH AAA 1 701 115 HOH HOH . 
H 6 HOH AAA 2 702 77 HOH HOH . 
H 6 HOH AAA 3 703 41 HOH HOH . 
H 6 HOH AAA 4 704 6 HOH HOH . 
H 6 HOH AAA 5 705 135 HOH HOH . 
H 6 HOH AAA 6 706 65 HOH HOH . 
H 6 HOH AAA 7 707 43 HOH HOH . 
H 6 HOH AAA 8 708 107 HOH HOH . 
H 6 HOH AAA 9 709 106 HOH HOH . 
H 6 HOH AAA 10 710 68 HOH HOH . 
H 6 HOH AAA 11 711 21 HOH HOH . 
H 6 HOH AAA 12 712 56 HOH HOH . 
H 6 HOH AAA 13 713 53 HOH HOH . 
H 6 HOH AAA 14 714 136 HOH HOH . 
H 6 HOH AAA 15 715 78 HOH HOH . 
H 6 HOH AAA 16 716 71 HOH HOH . 
H 6 HOH AAA 17 717 13 HOH HOH . 
H 6 HOH AAA 18 718 15 HOH HOH . 
H 6 HOH AAA 19 719 67 HOH HOH . 
H 6 HOH AAA 20 720 150 HOH HOH . 
H 6 HOH AAA 21 721 1 HOH HOH . 
H 6 HOH AAA 22 722 131 HOH HOH . 
H 6 HOH AAA 23 723 9 HOH HOH . 
H 6 HOH AAA 24 724 117 HOH HOH . 
H 6 HOH AAA 25 725 8 HOH HOH . 
H 6 HOH AAA 26 726 108 HOH HOH . 
H 6 HOH AAA 27 727 10 HOH HOH . 
H 6 HOH AAA 28 728 38 HOH HOH . 
H 6 HOH AAA 29 729 33 HOH HOH . 
H 6 HOH AAA 30 730 2 HOH HOH . 
H 6 HOH AAA 31 731 4 HOH HOH . 
H 6 HOH AAA 32 732 62 HOH HOH . 
H 6 HOH AAA 33 733 148 HOH HOH . 
H 6 HOH AAA 34 734 55 HOH HOH . 
H 6 HOH AAA 35 735 3 HOH HOH . 
H 6 HOH AAA 36 736 79 HOH HOH . 
H 6 HOH AAA 37 737 94 HOH HOH . 
H 6 HOH AAA 38 738 17 HOH HOH . 
H 6 HOH AAA 39 739 39 HOH HOH . 
H 6 HOH AAA 40 740 57 HOH HOH . 
H 6 HOH AAA 41 741 27 HOH HOH . 
H 6 HOH AAA 42 742 105 HOH HOH . 
H 6 HOH AAA 43 743 32 HOH HOH . 
H 6 HOH AAA 44 744 63 HOH HOH . 
H 6 HOH AAA 45 745 80 HOH HOH . 
H 6 HOH AAA 46 746 24 HOH HOH . 
H 6 HOH AAA 47 747 25 HOH HOH . 
H 6 HOH AAA 48 748 66 HOH HOH . 
H 6 HOH AAA 49 749 88 HOH HOH . 
H 6 HOH AAA 50 750 14 HOH HOH . 
H 6 HOH AAA 51 751 34 HOH HOH . 
H 6 HOH AAA 52 752 119 HOH HOH . 
H 6 HOH AAA 53 753 26 HOH HOH . 
H 6 HOH AAA 54 754 37 HOH HOH . 
H 6 HOH AAA 55 755 47 HOH HOH . 
H 6 HOH AAA 56 756 19 HOH HOH . 
H 6 HOH AAA 57 757 44 HOH HOH . 
H 6 HOH AAA 58 758 141 HOH HOH . 
H 6 HOH AAA 59 759 50 HOH HOH . 
H 6 HOH AAA 60 760 28 HOH HOH . 
H 6 HOH AAA 61 761 52 HOH HOH . 
H 6 HOH AAA 62 762 11 HOH HOH . 
H 6 HOH AAA 63 763 116 HOH HOH . 
H 6 HOH AAA 64 764 87 HOH HOH . 
H 6 HOH AAA 65 765 70 HOH HOH . 
H 6 HOH AAA 66 766 140 HOH HOH . 
H 6 HOH AAA 67 767 92 HOH HOH . 
H 6 HOH AAA 68 768 89 HOH HOH . 
H 6 HOH AAA 69 769 64 HOH HOH . 
H 6 HOH AAA 70 770 59 HOH HOH . 
H 6 HOH AAA 71 771 93 HOH HOH . 
H 6 HOH AAA 72 772 152 HOH HOH . 
H 6 HOH AAA 73 773 85 HOH HOH . 
H 6 HOH AAA 74 774 83 HOH HOH . 
H 6 HOH AAA 75 775 61 HOH HOH . 
H 6 HOH AAA 76 776 97 HOH HOH . 
H 6 HOH AAA 77 777 36 HOH HOH . 
H 6 HOH AAA 78 778 128 HOH HOH . 
H 6 HOH AAA 79 779 72 HOH HOH . 
H 6 HOH AAA 80 780 147 HOH HOH . 
H 6 HOH AAA 81 781 151 HOH HOH . 
H 6 HOH AAA 82 782 103 HOH HOH . 
H 6 HOH AAA 83 783 118 HOH HOH . 
H 6 HOH AAA 84 784 49 HOH HOH . 
H 6 HOH AAA 85 785 90 HOH HOH . 
H 6 HOH AAA 86 786 40 HOH HOH . 
H 6 HOH AAA 87 787 126 HOH HOH . 
H 6 HOH AAA 88 788 133 HOH HOH . 
H 6 HOH AAA 89 789 45 HOH HOH . 
H 6 HOH AAA 90 790 130 HOH HOH . 
H 6 HOH AAA 91 791 137 HOH HOH . 
H 6 HOH AAA 92 792 139 HOH HOH . 
H 6 HOH AAA 93 793 120 HOH HOH . 
H 6 HOH AAA 94 794 138 HOH HOH . 
H 6 HOH AAA 95 795 125 HOH HOH . 
H 6 HOH AAA 96 796 112 HOH HOH . 
H 6 HOH AAA 97 797 102 HOH HOH . 
H 6 HOH AAA 98 798 111 HOH HOH . 
H 6 HOH AAA 99 799 132 HOH HOH . 
H 6 HOH AAA 100 800 42 HOH HOH . 
H 6 HOH AAA 101 801 46 HOH HOH . 
H 6 HOH AAA 102 802 76 HOH HOH . 
H 6 HOH AAA 103 803 129 HOH HOH . 
H 6 HOH AAA 104 804 74 HOH HOH . 
H 6 HOH AAA 105 805 127 HOH HOH . 
H 6 HOH AAA 106 806 95 HOH HOH . 
H 6 HOH AAA 107 807 101 HOH HOH . 
I 6 HOH BBB 1 301 142 HOH HOH . 
I 6 HOH BBB 2 302 114 HOH HOH . 
I 6 HOH BBB 3 303 110 HOH HOH . 
I 6 HOH BBB 4 304 29 HOH HOH . 
I 6 HOH BBB 5 305 134 HOH HOH . 
I 6 HOH BBB 6 306 98 HOH HOH . 
I 6 HOH BBB 7 307 7 HOH HOH . 
I 6 HOH BBB 8 308 124 HOH HOH . 
I 6 HOH BBB 9 309 12 HOH HOH . 
I 6 HOH BBB 10 310 48 HOH HOH . 
I 6 HOH BBB 11 311 23 HOH HOH . 
I 6 HOH BBB 12 312 91 HOH HOH . 
I 6 HOH BBB 13 313 30 HOH HOH . 
I 6 HOH BBB 14 314 82 HOH HOH . 
I 6 HOH BBB 15 315 22 HOH HOH . 
I 6 HOH BBB 16 316 51 HOH HOH . 
I 6 HOH BBB 17 317 149 HOH HOH . 
I 6 HOH BBB 18 318 20 HOH HOH . 
I 6 HOH BBB 19 319 18 HOH HOH . 
I 6 HOH BBB 20 320 122 HOH HOH . 
I 6 HOH BBB 21 321 123 HOH HOH . 
I 6 HOH BBB 22 322 146 HOH HOH . 
I 6 HOH BBB 23 323 153 HOH HOH . 
I 6 HOH BBB 24 324 75 HOH HOH . 
I 6 HOH BBB 25 325 145 HOH HOH . 
I 6 HOH BBB 26 326 96 HOH HOH . 
I 6 HOH BBB 27 327 121 HOH HOH . 
I 6 HOH BBB 28 328 143 HOH HOH . 
I 6 HOH BBB 29 329 69 HOH HOH . 
I 6 HOH BBB 30 330 144 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 4 11.83 -26.667 7.807 1 98.07 ? P PO4 602 AAA 1 
HETATM 2 O O1 PO4 . . . D 4 12.586 -26.782 6.479 1 88.99 ? O1 PO4 602 AAA 1 
HETATM 3 O O2 PO4 . . . D 4 12.773 -26.139 8.885 1 77.59 ? O2 PO4 602 AAA 1 
HETATM 4 O O3 PO4 . . . D 4 11.31 -28.061 8.231 1 69.96 ? O3 PO4 602 AAA 1 
HETATM 5 O O4 PO4 . . . D 4 10.655 -25.694 7.641 1 93.16 ? O4 PO4 602 AAA 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#