data_7NL8 # _model_server_result.job_id zdnTKDctpKwWOCRPeAW-jg _model_server_result.datetime_utc '2025-01-10 18:44:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nl8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":205}' # _entry.id 7NL8 # _exptl.entry_id 7NL8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NL8 _cell.length_a 57.53 _cell.length_b 57.53 _cell.length_c 159.52 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NL8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,H,I,J,K,L,N 1 1 A,C,D,E,F,G,M 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_565 x-y,-y+1,-z+1/3 1 0 0 0 -1 0 0 0 -1 -28.765 49.822441 53.173333 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 M O HOH . A HOH 375 4_455 J MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc2 J MG MG . B MG 203 1_555 N O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc3 J MG MG . B MG 203 1_555 N O HOH . B HOH 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc4 J MG MG . B MG 203 1_555 N O HOH . B HOH 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc5 J MG MG . B MG 203 1_555 N O HOH . B HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc6 J MG MG . B MG 203 1_555 N O HOH . B HOH 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 283 n n C1 C2 PGE sing 284 n n C1 H1 PGE sing 285 n n C1 H12 PGE sing 286 n n O1 HO1 PGE sing 287 n n C2 O2 PGE sing 288 n n C2 H2 PGE sing 289 n n C2 H22 PGE sing 290 n n O2 C3 PGE sing 291 n n C3 C4 PGE sing 292 n n C3 H3 PGE sing 293 n n C3 H32 PGE sing 294 n n C4 O3 PGE sing 295 n n C4 H4 PGE sing 296 n n C4 H42 PGE sing 297 n n O4 C6 PGE sing 298 n n O4 HO4 PGE sing 299 n n C6 C5 PGE sing 300 n n C6 H6 PGE sing 301 n n C6 H62 PGE sing 302 n n C5 O3 PGE sing 303 n n C5 H5 PGE sing 304 n n C5 H52 PGE sing 305 n n # _atom_sites.entry_id 7NL8 _atom_sites.fract_transf_matrix[1][1] 0.017382 _atom_sites.fract_transf_matrix[1][2] 0.010036 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006269 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 3 CL CL . D 2 CL A 1 202 4 CL CL . E 3 DMS A 1 203 1 DMS DMS . F 3 DMS A 1 204 2 DMS DMS . G 4 PEG A 1 205 1 PEG PEG . H 2 CL B 1 201 2 CL CL . I 2 CL B 1 202 5 CL CL . J 5 MG B 1 203 1 MG MG . K 6 45L B 1 204 1 45L XXX . L 7 PGE B 1 205 1 PGE PG3 . M 8 HOH A 1 301 112 HOH HOH . M 8 HOH A 2 302 11 HOH HOH . M 8 HOH A 3 303 192 HOH HOH . M 8 HOH A 4 304 100 HOH HOH . M 8 HOH A 5 305 97 HOH HOH . M 8 HOH A 6 306 106 HOH HOH . M 8 HOH A 7 307 196 HOH HOH . M 8 HOH A 8 308 105 HOH HOH . M 8 HOH A 9 309 188 HOH HOH . M 8 HOH A 10 310 113 HOH HOH . M 8 HOH A 11 311 48 HOH HOH . M 8 HOH A 12 312 12 HOH HOH . M 8 HOH A 13 313 33 HOH HOH . M 8 HOH A 14 314 68 HOH HOH . M 8 HOH A 15 315 132 HOH HOH . M 8 HOH A 16 316 22 HOH HOH . M 8 HOH A 17 317 213 HOH HOH . M 8 HOH A 18 318 162 HOH HOH . M 8 HOH A 19 319 65 HOH HOH . M 8 HOH A 20 320 44 HOH HOH . M 8 HOH A 21 321 14 HOH HOH . M 8 HOH A 22 322 71 HOH HOH . M 8 HOH A 23 323 6 HOH HOH . M 8 HOH A 24 324 20 HOH HOH . M 8 HOH A 25 325 109 HOH HOH . M 8 HOH A 26 326 79 HOH HOH . M 8 HOH A 27 327 115 HOH HOH . M 8 HOH A 28 328 184 HOH HOH . M 8 HOH A 29 329 118 HOH HOH . M 8 HOH A 30 330 166 HOH HOH . M 8 HOH A 31 331 217 HOH HOH . M 8 HOH A 32 332 133 HOH HOH . M 8 HOH A 33 333 107 HOH HOH . M 8 HOH A 34 334 23 HOH HOH . M 8 HOH A 35 335 101 HOH HOH . M 8 HOH A 36 336 123 HOH HOH . M 8 HOH A 37 337 93 HOH HOH . M 8 HOH A 38 338 128 HOH HOH . M 8 HOH A 39 339 35 HOH HOH . M 8 HOH A 40 340 142 HOH HOH . M 8 HOH A 41 341 99 HOH HOH . M 8 HOH A 42 342 66 HOH HOH . M 8 HOH A 43 343 28 HOH HOH . M 8 HOH A 44 344 124 HOH HOH . M 8 HOH A 45 345 34 HOH HOH . M 8 HOH A 46 346 186 HOH HOH . M 8 HOH A 47 347 114 HOH HOH . M 8 HOH A 48 348 110 HOH HOH . M 8 HOH A 49 349 54 HOH HOH . M 8 HOH A 50 350 126 HOH HOH . M 8 HOH A 51 351 56 HOH HOH . M 8 HOH A 52 352 135 HOH HOH . M 8 HOH A 53 353 4 HOH HOH . M 8 HOH A 54 354 103 HOH HOH . M 8 HOH A 55 355 218 HOH HOH . M 8 HOH A 56 356 179 HOH HOH . M 8 HOH A 57 357 36 HOH HOH . M 8 HOH A 58 358 57 HOH HOH . M 8 HOH A 59 359 78 HOH HOH . M 8 HOH A 60 360 84 HOH HOH . M 8 HOH A 61 361 83 HOH HOH . M 8 HOH A 62 362 55 HOH HOH . M 8 HOH A 63 363 206 HOH HOH . M 8 HOH A 64 364 207 HOH HOH . M 8 HOH A 65 365 49 HOH HOH . M 8 HOH A 66 366 187 HOH HOH . M 8 HOH A 67 367 58 HOH HOH . M 8 HOH A 68 368 177 HOH HOH . M 8 HOH A 69 369 38 HOH HOH . M 8 HOH A 70 370 26 HOH HOH . M 8 HOH A 71 371 117 HOH HOH . M 8 HOH A 72 372 51 HOH HOH . M 8 HOH A 73 373 67 HOH HOH . M 8 HOH A 74 374 127 HOH HOH . M 8 HOH A 75 375 87 HOH HOH . M 8 HOH A 76 376 168 HOH HOH . M 8 HOH A 77 377 85 HOH HOH . M 8 HOH A 78 378 108 HOH HOH . M 8 HOH A 79 379 203 HOH HOH . M 8 HOH A 80 380 91 HOH HOH . M 8 HOH A 81 381 167 HOH HOH . M 8 HOH A 82 382 80 HOH HOH . M 8 HOH A 83 383 116 HOH HOH . M 8 HOH A 84 384 185 HOH HOH . M 8 HOH A 85 385 157 HOH HOH . M 8 HOH A 86 386 73 HOH HOH . M 8 HOH A 87 387 159 HOH HOH . M 8 HOH A 88 388 156 HOH HOH . N 8 HOH B 1 301 94 HOH HOH . N 8 HOH B 2 302 19 HOH HOH . N 8 HOH B 3 303 144 HOH HOH . N 8 HOH B 4 304 76 HOH HOH . N 8 HOH B 5 305 216 HOH HOH . N 8 HOH B 6 306 70 HOH HOH . N 8 HOH B 7 307 89 HOH HOH . N 8 HOH B 8 308 30 HOH HOH . N 8 HOH B 9 309 81 HOH HOH . N 8 HOH B 10 310 39 HOH HOH . N 8 HOH B 11 311 52 HOH HOH . N 8 HOH B 12 312 40 HOH HOH . N 8 HOH B 13 313 53 HOH HOH . N 8 HOH B 14 314 69 HOH HOH . N 8 HOH B 15 315 198 HOH HOH . N 8 HOH B 16 316 59 HOH HOH . N 8 HOH B 17 317 211 HOH HOH . N 8 HOH B 18 318 31 HOH HOH . N 8 HOH B 19 319 15 HOH HOH . N 8 HOH B 20 320 170 HOH HOH . N 8 HOH B 21 321 199 HOH HOH . N 8 HOH B 22 322 111 HOH HOH . N 8 HOH B 23 323 82 HOH HOH . N 8 HOH B 24 324 140 HOH HOH . N 8 HOH B 25 325 195 HOH HOH . N 8 HOH B 26 326 16 HOH HOH . N 8 HOH B 27 327 121 HOH HOH . N 8 HOH B 28 328 104 HOH HOH . N 8 HOH B 29 329 18 HOH HOH . N 8 HOH B 30 330 98 HOH HOH . N 8 HOH B 31 331 27 HOH HOH . N 8 HOH B 32 332 183 HOH HOH . N 8 HOH B 33 333 62 HOH HOH . N 8 HOH B 34 334 152 HOH HOH . N 8 HOH B 35 335 155 HOH HOH . N 8 HOH B 36 336 7 HOH HOH . N 8 HOH B 37 337 43 HOH HOH . N 8 HOH B 38 338 215 HOH HOH . N 8 HOH B 39 339 24 HOH HOH . N 8 HOH B 40 340 42 HOH HOH . N 8 HOH B 41 341 50 HOH HOH . N 8 HOH B 42 342 158 HOH HOH . N 8 HOH B 43 343 102 HOH HOH . N 8 HOH B 44 344 205 HOH HOH . N 8 HOH B 45 345 25 HOH HOH . N 8 HOH B 46 346 182 HOH HOH . N 8 HOH B 47 347 21 HOH HOH . N 8 HOH B 48 348 212 HOH HOH . N 8 HOH B 49 349 143 HOH HOH . N 8 HOH B 50 350 63 HOH HOH . N 8 HOH B 51 351 175 HOH HOH . N 8 HOH B 52 352 136 HOH HOH . N 8 HOH B 53 353 75 HOH HOH . N 8 HOH B 54 354 120 HOH HOH . N 8 HOH B 55 355 61 HOH HOH . N 8 HOH B 56 356 129 HOH HOH . N 8 HOH B 57 357 29 HOH HOH . N 8 HOH B 58 358 74 HOH HOH . N 8 HOH B 59 359 208 HOH HOH . N 8 HOH B 60 360 90 HOH HOH . N 8 HOH B 61 361 41 HOH HOH . N 8 HOH B 62 362 17 HOH HOH . N 8 HOH B 63 363 163 HOH HOH . N 8 HOH B 64 364 47 HOH HOH . N 8 HOH B 65 365 151 HOH HOH . N 8 HOH B 66 366 72 HOH HOH . N 8 HOH B 67 367 88 HOH HOH . N 8 HOH B 68 368 60 HOH HOH . N 8 HOH B 69 369 10 HOH HOH . N 8 HOH B 70 370 197 HOH HOH . N 8 HOH B 71 371 214 HOH HOH . N 8 HOH B 72 372 13 HOH HOH . N 8 HOH B 73 373 219 HOH HOH . N 8 HOH B 74 374 147 HOH HOH . N 8 HOH B 75 375 9 HOH HOH . N 8 HOH B 76 376 45 HOH HOH . N 8 HOH B 77 377 165 HOH HOH . N 8 HOH B 78 378 92 HOH HOH . N 8 HOH B 79 379 86 HOH HOH . N 8 HOH B 80 380 176 HOH HOH . N 8 HOH B 81 381 153 HOH HOH . N 8 HOH B 82 382 210 HOH HOH . N 8 HOH B 83 383 149 HOH HOH . N 8 HOH B 84 384 150 HOH HOH . N 8 HOH B 85 385 220 HOH HOH . N 8 HOH B 86 386 169 HOH HOH . N 8 HOH B 87 387 130 HOH HOH . N 8 HOH B 88 388 146 HOH HOH . N 8 HOH B 89 389 148 HOH HOH . N 8 HOH B 90 390 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . L 7 -30.041 23.321 -0.761 1 48.79 ? C1 PGE 205 B 1 HETATM 2 O O1 PGE . . . L 7 -30.163 24.612 -1.338 1 54.66 ? O1 PGE 205 B 1 HETATM 3 C C2 PGE . . . L 7 -28.97 22.52 -1.436 1 43.27 ? C2 PGE 205 B 1 HETATM 4 O O2 PGE . . . L 7 -29.271 22.392 -2.822 1 49.62 ? O2 PGE 205 B 1 HETATM 5 C C3 PGE . . . L 7 -28.894 21.124 -3.34 1 51.31 ? C3 PGE 205 B 1 HETATM 6 C C4 PGE . . . L 7 -29.383 20.972 -4.739 1 49.66 ? C4 PGE 205 B 1 HETATM 7 O O4 PGE . . . L 7 -33.453 20.786 -3.838 1 63.39 ? O4 PGE 205 B 1 HETATM 8 C C6 PGE . . . L 7 -32.949 20.131 -4.99 1 58.33 ? C6 PGE 205 B 1 HETATM 9 C C5 PGE . . . L 7 -31.478 19.878 -4.873 1 60.01 ? C5 PGE 205 B 1 HETATM 10 O O3 PGE . . . L 7 -30.795 21.118 -4.769 1 59.6 ? O3 PGE 205 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #