data_7NLT # _model_server_result.job_id J15ksHd8H6qN8XNG2KDgSw _model_server_result.datetime_utc '2024-12-01 18:22:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nlt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7NLT # _exptl.entry_id 7NLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.268 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(4-methylpiperazin-1-yl)benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NLT _cell.length_a 173.627 _cell.length_b 173.627 _cell.length_c 71.992 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 71.992 5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 71.992 6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 71.992 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H16 N2 O2' _chem_comp.formula_weight 220.268 _chem_comp.id 14N _chem_comp.mon_nstd_flag . _chem_comp.name '4-(4-methylpiperazin-1-yl)benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 14N sing 1 n n C2 N1 14N sing 2 n n C3 N2 14N sing 3 n n C5 C4 14N sing 4 n n C5 N1 14N sing 5 n n C4 N2 14N sing 6 n n N1 C1 14N sing 7 n n N2 C6 14N sing 8 n n C6 C11 14N doub 9 n y C6 C7 14N sing 10 n y C11 C10 14N sing 11 n y C7 C8 14N doub 12 n y C10 C9 14N doub 13 n y C8 C9 14N sing 14 n y C9 C12 14N sing 15 n n C12 O2 14N doub 16 n n C12 O1 14N sing 17 n n C3 H1 14N sing 18 n n C3 H2 14N sing 19 n n C2 H3 14N sing 20 n n C2 H4 14N sing 21 n n C1 H6 14N sing 22 n n C1 H7 14N sing 23 n n C1 H8 14N sing 24 n n C5 H9 14N sing 25 n n C5 H10 14N sing 26 n n C4 H11 14N sing 27 n n C4 H12 14N sing 28 n n C7 H13 14N sing 29 n n C8 H14 14N sing 30 n n O1 H15 14N sing 31 n n C10 H16 14N sing 32 n n C11 H17 14N sing 33 n n # _atom_sites.entry_id 7NLT _atom_sites.fract_transf_matrix[1][1] 0.005759 _atom_sites.fract_transf_matrix[1][2] 0.003325 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 14N A 1 301 1 14N LIG . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 HOH A 1 401 16 HOH HOH . E 4 HOH A 2 402 2 HOH HOH . E 4 HOH A 3 403 11 HOH HOH . E 4 HOH A 4 404 10 HOH HOH . E 4 HOH A 5 405 12 HOH HOH . E 4 HOH A 6 406 7 HOH HOH . E 4 HOH A 7 407 8 HOH HOH . E 4 HOH A 8 408 3 HOH HOH . E 4 HOH A 9 409 1 HOH HOH . E 4 HOH A 10 410 4 HOH HOH . E 4 HOH A 11 411 13 HOH HOH . E 4 HOH A 12 412 9 HOH HOH . E 4 HOH A 13 413 6 HOH HOH . E 4 HOH A 14 414 15 HOH HOH . E 4 HOH A 15 415 14 HOH HOH . E 4 HOH A 16 416 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 14N . . . B 2 8.635 -17.627 33.856 0.5 77.02 ? C3 14N 301 A 1 HETATM 2 C C2 14N . . . B 2 7.951 -18.023 32.553 0.5 78.46 ? C2 14N 301 A 1 HETATM 3 N N1 14N . . . B 2 8.893 -18.509 31.556 0.5 80.05 ? N1 14N 301 A 1 HETATM 4 C C1 14N . . . B 2 9.589 -17.356 31.013 0.5 83.89 ? C1 14N 301 A 1 HETATM 5 C C5 14N . . . B 2 9.878 -19.477 32.033 0.5 77.16 ? C5 14N 301 A 1 HETATM 6 C C4 14N . . . B 2 10.486 -19.162 33.397 0.5 75.26 ? C4 14N 301 A 1 HETATM 7 N N2 14N . . . B 2 9.487 -18.696 34.339 0.5 76.92 ? N2 14N 301 A 1 HETATM 8 C C6 14N . . . B 2 10.065 -18.38 35.628 0.5 75.27 ? C6 14N 301 A 1 HETATM 9 C C7 14N . . . B 2 10.877 -19.324 36.241 0.5 75.08 ? C7 14N 301 A 1 HETATM 10 C C8 14N . . . B 2 11.425 -19.056 37.477 0.5 75.29 ? C8 14N 301 A 1 HETATM 11 C C9 14N . . . B 2 11.165 -17.836 38.079 0.5 76.58 ? C9 14N 301 A 1 HETATM 12 C C12 14N . . . B 2 11.783 -17.551 39.437 0.5 78.2 ? C12 14N 301 A 1 HETATM 13 O O2 14N . . . B 2 11.849 -16.367 39.87 0.5 79.42 ? O2 14N 301 A 1 HETATM 14 O O1 14N . . . B 2 12.223 -18.515 40.112 0.5 76.07 -1 O1 14N 301 A 1 HETATM 15 C C10 14N . . . B 2 10.356 -16.888 37.469 0.5 75.58 ? C10 14N 301 A 1 HETATM 16 C C11 14N . . . B 2 9.801 -17.158 36.232 0.5 73.73 ? C11 14N 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #