data_7NME # _model_server_result.job_id UAAPD8LLrIsap8lV0B4aRQ _model_server_result.datetime_utc '2024-12-22 02:03:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nme # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 7NME # _exptl.entry_id 7NME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NME _cell.length_a 55.163 _cell.length_b 71.347 _cell.length_c 220.185 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NME _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf4 D SG CYS 22 D CYS 23 1_555 D SG CYS 89 D CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf5 D SG CYS 133 D CYS 134 1_555 D SG CYS 183 D CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf6 D SG CYS 158 D CYS 159 1_555 E SG CYS 167 E CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf7 E SG CYS 22 E CYS 24 1_555 E SG CYS 91 E CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 E SG CYS 141 E CYS 143 1_555 E SG CYS 206 E CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 70 n n C1 C2 BTB sing 71 n n C1 H11 BTB sing 72 n n C1 H12 BTB sing 73 n n O1 HO1 BTB sing 74 n n C2 C3 BTB sing 75 n n C2 C4 BTB sing 76 n n C2 N BTB sing 77 n n C3 O3 BTB sing 78 n n C3 H31 BTB sing 79 n n C3 H32 BTB sing 80 n n O3 HO3 BTB sing 81 n n C4 O4 BTB sing 82 n n C4 H41 BTB sing 83 n n C4 H42 BTB sing 84 n n O4 HO4 BTB sing 85 n n N C5 BTB sing 86 n n N C7 BTB sing 87 n n C5 C6 BTB sing 88 n n C5 H51 BTB sing 89 n n C5 H52 BTB sing 90 n n C6 O6 BTB sing 91 n n C6 H61 BTB sing 92 n n C6 H62 BTB sing 93 n n O6 HO6 BTB sing 94 n n C7 C8 BTB sing 95 n n C7 H71 BTB sing 96 n n C7 H72 BTB sing 97 n n C8 O8 BTB sing 98 n n C8 H81 BTB sing 99 n n C8 H82 BTB sing 100 n n O8 HO8 BTB sing 101 n n # _atom_sites.entry_id 7NME _atom_sites.fract_transf_matrix[1][1] 0.018128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 BTB A 1 301 301 BTB BTB . G 7 SO4 A 1 302 1 SO4 SO4 . H 8 EDO A 1 303 1 EDO EDO . I 9 HOH A 1 401 167 HOH HOH . I 9 HOH A 2 402 158 HOH HOH . I 9 HOH A 3 403 46 HOH HOH . I 9 HOH A 4 404 88 HOH HOH . I 9 HOH A 5 405 64 HOH HOH . I 9 HOH A 6 406 65 HOH HOH . I 9 HOH A 7 407 1 HOH HOH . I 9 HOH A 8 408 136 HOH HOH . I 9 HOH A 9 409 34 HOH HOH . I 9 HOH A 10 410 80 HOH HOH . I 9 HOH A 11 411 32 HOH HOH . I 9 HOH A 12 412 17 HOH HOH . I 9 HOH A 13 413 109 HOH HOH . I 9 HOH A 14 414 36 HOH HOH . I 9 HOH A 15 415 197 HOH HOH . I 9 HOH A 16 416 114 HOH HOH . I 9 HOH A 17 417 74 HOH HOH . I 9 HOH A 18 418 71 HOH HOH . I 9 HOH A 19 419 186 HOH HOH . I 9 HOH A 20 420 139 HOH HOH . I 9 HOH A 21 421 82 HOH HOH . I 9 HOH A 22 422 78 HOH HOH . I 9 HOH A 23 423 165 HOH HOH . I 9 HOH A 24 424 95 HOH HOH . I 9 HOH A 25 425 188 HOH HOH . I 9 HOH A 26 426 85 HOH HOH . I 9 HOH A 27 427 117 HOH HOH . I 9 HOH A 28 428 9 HOH HOH . I 9 HOH A 29 429 132 HOH HOH . I 9 HOH A 30 430 169 HOH HOH . I 9 HOH A 31 431 56 HOH HOH . I 9 HOH A 32 432 45 HOH HOH . I 9 HOH A 33 433 148 HOH HOH . I 9 HOH A 34 434 105 HOH HOH . I 9 HOH A 35 435 151 HOH HOH . I 9 HOH A 36 436 26 HOH HOH . I 9 HOH A 37 437 107 HOH HOH . I 9 HOH A 38 438 100 HOH HOH . I 9 HOH A 39 439 171 HOH HOH . I 9 HOH A 40 440 170 HOH HOH . I 9 HOH A 41 441 50 HOH HOH . I 9 HOH A 42 442 179 HOH HOH . I 9 HOH A 43 443 6 HOH HOH . I 9 HOH A 44 444 3 HOH HOH . I 9 HOH A 45 445 81 HOH HOH . I 9 HOH A 46 446 143 HOH HOH . I 9 HOH A 47 447 168 HOH HOH . I 9 HOH A 48 448 79 HOH HOH . I 9 HOH A 49 449 90 HOH HOH . I 9 HOH A 50 450 60 HOH HOH . I 9 HOH A 51 451 200 HOH HOH . I 9 HOH A 52 452 166 HOH HOH . I 9 HOH A 53 453 119 HOH HOH . I 9 HOH A 54 454 108 HOH HOH . I 9 HOH A 55 455 28 HOH HOH . I 9 HOH A 56 456 113 HOH HOH . I 9 HOH A 57 457 157 HOH HOH . I 9 HOH A 58 458 19 HOH HOH . I 9 HOH A 59 459 144 HOH HOH . I 9 HOH A 60 460 87 HOH HOH . I 9 HOH A 61 461 125 HOH HOH . I 9 HOH A 62 462 47 HOH HOH . I 9 HOH A 63 463 118 HOH HOH . I 9 HOH A 64 464 10 HOH HOH . I 9 HOH A 65 465 152 HOH HOH . I 9 HOH A 66 466 83 HOH HOH . I 9 HOH A 67 467 147 HOH HOH . I 9 HOH A 68 468 37 HOH HOH . I 9 HOH A 69 469 16 HOH HOH . I 9 HOH A 70 470 84 HOH HOH . I 9 HOH A 71 471 69 HOH HOH . I 9 HOH A 72 472 35 HOH HOH . I 9 HOH A 73 473 23 HOH HOH . I 9 HOH A 74 474 189 HOH HOH . I 9 HOH A 75 475 199 HOH HOH . I 9 HOH A 76 476 163 HOH HOH . I 9 HOH A 77 477 153 HOH HOH . I 9 HOH A 78 478 192 HOH HOH . J 9 HOH B 1 101 13 HOH HOH . J 9 HOH B 2 102 131 HOH HOH . J 9 HOH B 3 103 54 HOH HOH . J 9 HOH B 4 104 173 HOH HOH . J 9 HOH B 5 105 63 HOH HOH . J 9 HOH B 6 106 156 HOH HOH . J 9 HOH B 7 107 2 HOH HOH . J 9 HOH B 8 108 93 HOH HOH . J 9 HOH B 9 109 187 HOH HOH . J 9 HOH B 10 110 61 HOH HOH . J 9 HOH B 11 111 52 HOH HOH . J 9 HOH B 12 112 99 HOH HOH . J 9 HOH B 13 113 123 HOH HOH . J 9 HOH B 14 114 182 HOH HOH . J 9 HOH B 15 115 25 HOH HOH . J 9 HOH B 16 116 59 HOH HOH . J 9 HOH B 17 117 178 HOH HOH . J 9 HOH B 18 118 12 HOH HOH . J 9 HOH B 19 119 103 HOH HOH . J 9 HOH B 20 120 172 HOH HOH . J 9 HOH B 21 121 24 HOH HOH . J 9 HOH B 22 122 89 HOH HOH . J 9 HOH B 23 123 120 HOH HOH . J 9 HOH B 24 124 94 HOH HOH . J 9 HOH B 25 125 159 HOH HOH . J 9 HOH B 26 126 96 HOH HOH . J 9 HOH B 27 127 91 HOH HOH . J 9 HOH B 28 128 127 HOH HOH . J 9 HOH B 29 129 48 HOH HOH . J 9 HOH B 30 130 106 HOH HOH . J 9 HOH B 31 131 177 HOH HOH . J 9 HOH B 32 132 53 HOH HOH . J 9 HOH B 33 133 110 HOH HOH . J 9 HOH B 34 134 129 HOH HOH . J 9 HOH B 35 135 29 HOH HOH . J 9 HOH B 36 136 42 HOH HOH . J 9 HOH B 37 137 184 HOH HOH . J 9 HOH B 38 138 194 HOH HOH . J 9 HOH B 39 139 31 HOH HOH . J 9 HOH B 40 140 191 HOH HOH . K 9 HOH C 1 101 4 HOH HOH . K 9 HOH C 2 102 67 HOH HOH . K 9 HOH C 3 103 5 HOH HOH . K 9 HOH C 4 104 124 HOH HOH . L 9 HOH D 1 201 198 HOH HOH . L 9 HOH D 2 202 155 HOH HOH . L 9 HOH D 3 203 196 HOH HOH . L 9 HOH D 4 204 70 HOH HOH . L 9 HOH D 5 205 76 HOH HOH . L 9 HOH D 6 206 68 HOH HOH . L 9 HOH D 7 207 62 HOH HOH . L 9 HOH D 8 208 75 HOH HOH . L 9 HOH D 9 209 73 HOH HOH . L 9 HOH D 10 210 112 HOH HOH . L 9 HOH D 11 211 195 HOH HOH . L 9 HOH D 12 212 111 HOH HOH . L 9 HOH D 13 213 30 HOH HOH . L 9 HOH D 14 214 97 HOH HOH . L 9 HOH D 15 215 57 HOH HOH . L 9 HOH D 16 216 18 HOH HOH . L 9 HOH D 17 217 92 HOH HOH . L 9 HOH D 18 218 115 HOH HOH . L 9 HOH D 19 219 39 HOH HOH . L 9 HOH D 20 220 134 HOH HOH . L 9 HOH D 21 221 58 HOH HOH . L 9 HOH D 22 222 102 HOH HOH . L 9 HOH D 23 223 21 HOH HOH . L 9 HOH D 24 224 66 HOH HOH . L 9 HOH D 25 225 77 HOH HOH . L 9 HOH D 26 226 145 HOH HOH . L 9 HOH D 27 227 126 HOH HOH . L 9 HOH D 28 228 154 HOH HOH . L 9 HOH D 29 229 128 HOH HOH . L 9 HOH D 30 230 121 HOH HOH . L 9 HOH D 31 231 146 HOH HOH . L 9 HOH D 32 232 55 HOH HOH . L 9 HOH D 33 233 41 HOH HOH . L 9 HOH D 34 234 133 HOH HOH . L 9 HOH D 35 235 193 HOH HOH . L 9 HOH D 36 236 185 HOH HOH . M 9 HOH E 1 301 141 HOH HOH . M 9 HOH E 2 302 33 HOH HOH . M 9 HOH E 3 303 164 HOH HOH . M 9 HOH E 4 304 101 HOH HOH . M 9 HOH E 5 305 72 HOH HOH . M 9 HOH E 6 306 180 HOH HOH . M 9 HOH E 7 307 175 HOH HOH . M 9 HOH E 8 308 150 HOH HOH . M 9 HOH E 9 309 38 HOH HOH . M 9 HOH E 10 310 22 HOH HOH . M 9 HOH E 11 311 138 HOH HOH . M 9 HOH E 12 312 51 HOH HOH . M 9 HOH E 13 313 140 HOH HOH . M 9 HOH E 14 314 174 HOH HOH . M 9 HOH E 15 315 160 HOH HOH . M 9 HOH E 16 316 130 HOH HOH . M 9 HOH E 17 317 8 HOH HOH . M 9 HOH E 18 318 14 HOH HOH . M 9 HOH E 19 319 49 HOH HOH . M 9 HOH E 20 320 122 HOH HOH . M 9 HOH E 21 321 7 HOH HOH . M 9 HOH E 22 322 86 HOH HOH . M 9 HOH E 23 323 43 HOH HOH . M 9 HOH E 24 324 27 HOH HOH . M 9 HOH E 25 325 40 HOH HOH . M 9 HOH E 26 326 161 HOH HOH . M 9 HOH E 27 327 116 HOH HOH . M 9 HOH E 28 328 181 HOH HOH . M 9 HOH E 29 329 104 HOH HOH . M 9 HOH E 30 330 44 HOH HOH . M 9 HOH E 31 331 11 HOH HOH . M 9 HOH E 32 332 15 HOH HOH . M 9 HOH E 33 333 142 HOH HOH . M 9 HOH E 34 334 176 HOH HOH . M 9 HOH E 35 335 183 HOH HOH . M 9 HOH E 36 336 20 HOH HOH . M 9 HOH E 37 337 149 HOH HOH . M 9 HOH E 38 338 98 HOH HOH . M 9 HOH E 39 339 190 HOH HOH . M 9 HOH E 40 340 137 HOH HOH . M 9 HOH E 41 341 135 HOH HOH . M 9 HOH E 42 342 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . F 6 16.776 53.581 18.465 1 44.07 ? C1 BTB 301 A 1 HETATM 2 O O1 BTB . . . F 6 15.95 52.928 19.426 1 37.71 ? O1 BTB 301 A 1 HETATM 3 C C2 BTB . . . F 6 16.256 53.371 17.029 1 44.16 ? C2 BTB 301 A 1 HETATM 4 C C3 BTB . . . F 6 16.506 51.915 16.598 1 44.04 ? C3 BTB 301 A 1 HETATM 5 O O3 BTB . . . F 6 15.305 51.164 16.587 1 47.59 ? O3 BTB 301 A 1 HETATM 6 C C4 BTB . . . F 6 14.752 53.69 17.009 1 43.84 ? C4 BTB 301 A 1 HETATM 7 O O4 BTB . . . F 6 14.495 54.988 17.541 1 41.21 ? O4 BTB 301 A 1 HETATM 8 N N BTB . . . F 6 16.994 54.294 16.056 1 48.57 ? N BTB 301 A 1 HETATM 9 C C5 BTB . . . F 6 16.585 54.104 14.62 1 44.92 ? C5 BTB 301 A 1 HETATM 10 C C6 BTB . . . F 6 17.558 54.699 13.625 1 45.96 ? C6 BTB 301 A 1 HETATM 11 O O6 BTB . . . F 6 16.98 54.756 12.315 1 42.16 ? O6 BTB 301 A 1 HETATM 12 C C7 BTB . . . F 6 16.93 55.744 16.467 1 54.58 ? C7 BTB 301 A 1 HETATM 13 C C8 BTB . . . F 6 18.238 56.276 16.997 1 52.28 ? C8 BTB 301 A 1 HETATM 14 O O8 BTB . . . F 6 18.298 57.683 16.858 1 49.61 ? O8 BTB 301 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 14 #