data_7NMF
#
_model_server_result.job_id            Wfggq59KZas3JXhtwVwpDw 
_model_server_result.datetime_utc      '2025-03-05 20:23:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nmf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    7NMF 
#
_exptl.entry_id    7NMF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              195.237 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.98 
_cell.angle_gamma         90 
_cell.entry_id            7NMF 
_cell.length_a            63.38 
_cell.length_b            72.25 
_cell.length_c            114.84 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NMF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 D SG CYS 22 D CYS 23 1_555 D SG CYS 89 D CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
disulf ? disulf5 D SG CYS 133 D CYS 134 1_555 D SG CYS 183 D CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
disulf ? disulf6 D SG CYS 158 D CYS 159 1_555 E SG CYS 167 E CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
disulf ? disulf7 E SG CYS 22 E CYS 24 1_555 E SG CYS 91 E CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf8 E SG CYS 141 E CYS 143 1_555 E SG CYS 206 E CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
#
_chem_comp.formula           'C6 H13 N O4 S' 
_chem_comp.formula_weight    195.237 
_chem_comp.id                MES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 MES sing 227 n n 
O1 C6 MES sing 228 n n 
C2 C3 MES sing 229 n n 
C2 H21 MES sing 230 n n 
C2 H22 MES sing 231 n n 
C3 N4 MES sing 232 n n 
C3 H31 MES sing 233 n n 
C3 H32 MES sing 234 n n 
N4 C5 MES sing 235 n n 
N4 C7 MES sing 236 n n 
N4 HN4 MES sing 237 n n 
C5 C6 MES sing 238 n n 
C5 H51 MES sing 239 n n 
C5 H52 MES sing 240 n n 
C6 H61 MES sing 241 n n 
C6 H62 MES sing 242 n n 
C7 C8 MES sing 243 n n 
C7 H71 MES sing 244 n n 
C7 H72 MES sing 245 n n 
C8 S MES sing 246 n n 
C8 H81 MES sing 247 n n 
C8 H82 MES sing 248 n n 
S O1S MES doub 249 n n 
S O2S MES doub 250 n n 
S O3S MES sing 251 n n 
#
_atom_sites.entry_id                     7NMF 
_atom_sites.fract_transf_matrix[1][1]    0.015778 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003637 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013841 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008936 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 MES A 1 301 1 MES MES . 
G 7 EDO D 1 201 11 EDO EDO . 
H 8 SO4 E 1 301 1 SO4 SO4 . 
I 8 SO4 E 1 302 2 SO4 SO4 . 
J 9 HOH A 1 401 44 HOH HOH . 
J 9 HOH A 2 402 9 HOH HOH . 
J 9 HOH A 3 403 18 HOH HOH . 
J 9 HOH A 4 404 35 HOH HOH . 
J 9 HOH A 5 405 4 HOH HOH . 
J 9 HOH A 6 406 45 HOH HOH . 
J 9 HOH A 7 407 42 HOH HOH . 
J 9 HOH A 8 408 2 HOH HOH . 
J 9 HOH A 9 409 14 HOH HOH . 
J 9 HOH A 10 410 20 HOH HOH . 
J 9 HOH A 11 411 24 HOH HOH . 
J 9 HOH A 12 412 19 HOH HOH . 
K 9 HOH B 1 101 17 HOH HOH . 
K 9 HOH B 2 102 25 HOH HOH . 
K 9 HOH B 3 103 34 HOH HOH . 
K 9 HOH B 4 104 32 HOH HOH . 
L 9 HOH D 1 301 16 HOH HOH . 
L 9 HOH D 2 302 37 HOH HOH . 
L 9 HOH D 3 303 27 HOH HOH . 
L 9 HOH D 4 304 41 HOH HOH . 
L 9 HOH D 5 305 11 HOH HOH . 
L 9 HOH D 6 306 10 HOH HOH . 
L 9 HOH D 7 307 6 HOH HOH . 
L 9 HOH D 8 308 12 HOH HOH . 
L 9 HOH D 9 309 38 HOH HOH . 
L 9 HOH D 10 310 26 HOH HOH . 
L 9 HOH D 11 311 43 HOH HOH . 
L 9 HOH D 12 312 8 HOH HOH . 
L 9 HOH D 13 313 1 HOH HOH . 
L 9 HOH D 14 314 40 HOH HOH . 
L 9 HOH D 15 315 15 HOH HOH . 
L 9 HOH D 16 316 36 HOH HOH . 
L 9 HOH D 17 317 30 HOH HOH . 
M 9 HOH E 1 401 39 HOH HOH . 
M 9 HOH E 2 402 33 HOH HOH . 
M 9 HOH E 3 403 3 HOH HOH . 
M 9 HOH E 4 404 28 HOH HOH . 
M 9 HOH E 5 405 22 HOH HOH . 
M 9 HOH E 6 406 21 HOH HOH . 
M 9 HOH E 7 407 5 HOH HOH . 
M 9 HOH E 8 408 7 HOH HOH . 
M 9 HOH E 9 409 23 HOH HOH . 
M 9 HOH E 10 410 31 HOH HOH . 
M 9 HOH E 11 411 29 HOH HOH . 
M 9 HOH E 12 412 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 MES . . . F 6 4.488 -15.846 -25.177 1 67.53 ? O1 MES 301 A 1 
HETATM 2 C C2 MES . . . F 6 5.434 -14.896 -24.701 1 68.75 ? C2 MES 301 A 1 
HETATM 3 C C3 MES . . . F 6 6.847 -15.42 -24.793 1 71.1 ? C3 MES 301 A 1 
HETATM 4 N N4 MES . . . F 6 6.974 -16.687 -24.001 1 74.83 ? N4 MES 301 A 1 
HETATM 5 C C5 MES . . . F 6 5.958 -17.662 -24.509 1 70.84 ? C5 MES 301 A 1 
HETATM 6 C C6 MES . . . F 6 4.578 -17.05 -24.426 1 69.51 ? C6 MES 301 A 1 
HETATM 7 C C7 MES . . . F 6 8.375 -17.243 -24.015 1 82.88 ? C7 MES 301 A 1 
HETATM 8 C C8 MES . . . F 6 9.021 -17.318 -22.634 1 95.63 ? C8 MES 301 A 1 
HETATM 9 S S MES . . . F 6 10.767 -17.746 -22.675 1 117.81 ? S MES 301 A 1 
HETATM 10 O O1S MES . . . F 6 11.081 -18.047 -24.046 1 118.45 ? O1S MES 301 A 1 
HETATM 11 O O2S MES . . . F 6 11.479 -16.593 -22.195 1 115.06 ? O2S MES 301 A 1 
HETATM 12 O O3S MES . . . F 6 10.93 -18.885 -21.807 1 106.58 ? O3S MES 301 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#