data_7NMR # _model_server_result.job_id AnSCcqPCzgo2K0duzdXcZg _model_server_result.datetime_utc '2024-10-19 15:53:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 7NMR # _exptl.entry_id 7NMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.93 _cell.angle_gamma 90 _cell.entry_id 7NMR _cell.length_a 53.339 _cell.length_b 28.795 _cell.length_c 63.004 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 26 _struct_conn.ptnr1_auth_asym_id AAA _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 81 _struct_conn.ptnr2_auth_asym_id AAA _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 80 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.992 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7NMR _atom_sites.fract_transf_matrix[1][1] 0.018748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002279 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015989 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL AAA 1 101 98 GOL GOL . C 2 GOL AAA 1 102 99 GOL GOL . D 2 GOL AAA 1 103 100 GOL GOL . E 3 HOH AAA 1 201 218 HOH HOH . E 3 HOH AAA 2 202 185 HOH HOH . E 3 HOH AAA 3 203 152 HOH HOH . E 3 HOH AAA 4 204 205 HOH HOH . E 3 HOH AAA 5 205 182 HOH HOH . E 3 HOH AAA 6 206 191 HOH HOH . E 3 HOH AAA 7 207 194 HOH HOH . E 3 HOH AAA 8 208 160 HOH HOH . E 3 HOH AAA 9 209 157 HOH HOH . E 3 HOH AAA 10 210 143 HOH HOH . E 3 HOH AAA 11 211 101 HOH HOH . E 3 HOH AAA 12 212 119 HOH HOH . E 3 HOH AAA 13 213 141 HOH HOH . E 3 HOH AAA 14 214 123 HOH HOH . E 3 HOH AAA 15 215 111 HOH HOH . E 3 HOH AAA 16 216 103 HOH HOH . E 3 HOH AAA 17 217 153 HOH HOH . E 3 HOH AAA 18 218 161 HOH HOH . E 3 HOH AAA 19 219 165 HOH HOH . E 3 HOH AAA 20 220 151 HOH HOH . E 3 HOH AAA 21 221 121 HOH HOH . E 3 HOH AAA 22 222 163 HOH HOH . E 3 HOH AAA 23 223 116 HOH HOH . E 3 HOH AAA 24 224 166 HOH HOH . E 3 HOH AAA 25 225 193 HOH HOH . E 3 HOH AAA 26 226 102 HOH HOH . E 3 HOH AAA 27 227 126 HOH HOH . E 3 HOH AAA 28 228 148 HOH HOH . E 3 HOH AAA 29 229 137 HOH HOH . E 3 HOH AAA 30 230 144 HOH HOH . E 3 HOH AAA 31 231 129 HOH HOH . E 3 HOH AAA 32 232 146 HOH HOH . E 3 HOH AAA 33 233 145 HOH HOH . E 3 HOH AAA 34 234 138 HOH HOH . E 3 HOH AAA 35 235 105 HOH HOH . E 3 HOH AAA 36 236 124 HOH HOH . E 3 HOH AAA 37 237 118 HOH HOH . E 3 HOH AAA 38 238 164 HOH HOH . E 3 HOH AAA 39 239 109 HOH HOH . E 3 HOH AAA 40 240 135 HOH HOH . E 3 HOH AAA 41 241 206 HOH HOH . E 3 HOH AAA 42 242 115 HOH HOH . E 3 HOH AAA 43 243 158 HOH HOH . E 3 HOH AAA 44 244 107 HOH HOH . E 3 HOH AAA 45 245 188 HOH HOH . E 3 HOH AAA 46 246 120 HOH HOH . E 3 HOH AAA 47 247 139 HOH HOH . E 3 HOH AAA 48 248 128 HOH HOH . E 3 HOH AAA 49 249 199 HOH HOH . E 3 HOH AAA 50 250 149 HOH HOH . E 3 HOH AAA 51 251 108 HOH HOH . E 3 HOH AAA 52 252 229 HOH HOH . E 3 HOH AAA 53 253 133 HOH HOH . E 3 HOH AAA 54 254 177 HOH HOH . E 3 HOH AAA 55 255 209 HOH HOH . E 3 HOH AAA 56 256 125 HOH HOH . E 3 HOH AAA 57 257 216 HOH HOH . E 3 HOH AAA 58 258 104 HOH HOH . E 3 HOH AAA 59 259 202 HOH HOH . E 3 HOH AAA 60 260 122 HOH HOH . E 3 HOH AAA 61 261 127 HOH HOH . E 3 HOH AAA 62 262 226 HOH HOH . E 3 HOH AAA 63 263 183 HOH HOH . E 3 HOH AAA 64 264 231 HOH HOH . E 3 HOH AAA 65 265 117 HOH HOH . E 3 HOH AAA 66 266 136 HOH HOH . E 3 HOH AAA 67 267 179 HOH HOH . E 3 HOH AAA 68 268 114 HOH HOH . E 3 HOH AAA 69 269 131 HOH HOH . E 3 HOH AAA 70 270 113 HOH HOH . E 3 HOH AAA 71 271 180 HOH HOH . E 3 HOH AAA 72 272 190 HOH HOH . E 3 HOH AAA 73 273 106 HOH HOH . E 3 HOH AAA 74 274 110 HOH HOH . E 3 HOH AAA 75 275 195 HOH HOH . E 3 HOH AAA 76 276 178 HOH HOH . E 3 HOH AAA 77 277 200 HOH HOH . E 3 HOH AAA 78 278 211 HOH HOH . E 3 HOH AAA 79 279 112 HOH HOH . E 3 HOH AAA 80 280 140 HOH HOH . E 3 HOH AAA 81 281 207 HOH HOH . E 3 HOH AAA 82 282 147 HOH HOH . E 3 HOH AAA 83 283 142 HOH HOH . E 3 HOH AAA 84 284 189 HOH HOH . E 3 HOH AAA 85 285 134 HOH HOH . E 3 HOH AAA 86 286 170 HOH HOH . E 3 HOH AAA 87 287 171 HOH HOH . E 3 HOH AAA 88 288 208 HOH HOH . E 3 HOH AAA 89 289 150 HOH HOH . E 3 HOH AAA 90 290 213 HOH HOH . E 3 HOH AAA 91 291 197 HOH HOH . E 3 HOH AAA 92 292 186 HOH HOH . E 3 HOH AAA 93 293 217 HOH HOH . E 3 HOH AAA 94 294 196 HOH HOH . E 3 HOH AAA 95 295 214 HOH HOH . E 3 HOH AAA 96 296 227 HOH HOH . E 3 HOH AAA 97 297 222 HOH HOH . E 3 HOH AAA 98 298 201 HOH HOH . E 3 HOH AAA 99 299 210 HOH HOH . E 3 HOH AAA 100 300 130 HOH HOH . E 3 HOH AAA 101 301 192 HOH HOH . E 3 HOH AAA 102 302 228 HOH HOH . E 3 HOH AAA 103 303 223 HOH HOH . E 3 HOH AAA 104 304 156 HOH HOH . E 3 HOH AAA 105 305 181 HOH HOH . E 3 HOH AAA 106 306 155 HOH HOH . E 3 HOH AAA 107 307 220 HOH HOH . E 3 HOH AAA 108 308 187 HOH HOH . E 3 HOH AAA 109 309 224 HOH HOH . E 3 HOH AAA 110 310 154 HOH HOH . E 3 HOH AAA 111 311 225 HOH HOH . E 3 HOH AAA 112 312 167 HOH HOH . E 3 HOH AAA 113 313 215 HOH HOH . E 3 HOH AAA 114 314 204 HOH HOH . E 3 HOH AAA 115 315 203 HOH HOH . E 3 HOH AAA 116 316 212 HOH HOH . E 3 HOH AAA 117 317 169 HOH HOH . E 3 HOH AAA 118 318 219 HOH HOH . E 3 HOH AAA 119 319 221 HOH HOH . E 3 HOH AAA 120 320 132 HOH HOH . E 3 HOH AAA 121 321 159 HOH HOH . E 3 HOH AAA 122 322 174 HOH HOH . E 3 HOH AAA 123 323 162 HOH HOH . E 3 HOH AAA 124 324 168 HOH HOH . E 3 HOH AAA 125 325 198 HOH HOH . E 3 HOH AAA 126 326 184 HOH HOH . E 3 HOH AAA 127 327 230 HOH HOH . E 3 HOH AAA 128 328 173 HOH HOH . E 3 HOH AAA 129 329 172 HOH HOH . E 3 HOH AAA 130 330 176 HOH HOH . E 3 HOH AAA 131 331 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -5.329 -28.48 -18.23 1 25.72 ? C1 GOL 101 AAA 1 HETATM 2 O O1 GOL . . . B 2 -4.378 -27.445 -17.972 1 26.97 ? O1 GOL 101 AAA 1 HETATM 3 C C2 GOL . . . B 2 -4.892 -29.756 -17.55 1 24.19 ? C2 GOL 101 AAA 1 HETATM 4 O O2 GOL . . . B 2 -3.642 -30.145 -18.105 1 25.12 ? O2 GOL 101 AAA 1 HETATM 5 C C3 GOL . . . B 2 -4.751 -29.573 -16.058 1 24.43 ? C3 GOL 101 AAA 1 HETATM 6 O O3 GOL . . . B 2 -5.996 -29.236 -15.461 1 23.74 ? O3 GOL 101 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #