data_7NP4
#
_model_server_result.job_id            U-HBDvk56SZgroC6L53UYQ 
_model_server_result.datetime_utc      '2024-12-18 12:57:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7np4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1001}' 
#
_entry.id    7NP4 
#
_exptl.entry_id    7NP4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              329.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NP4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NP4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C10 H12 N5 O6 P' 
_chem_comp.formula_weight    329.206 
_chem_comp.id                CMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'CYCLIC AMP;CAMP' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P CMP doub 70 n n 
P O2P CMP sing 71 n n 
P O5' CMP sing 72 n n 
P O3' CMP sing 73 n n 
O2P HOP2 CMP sing 74 n n 
O5' C5' CMP sing 75 n n 
C5' C4' CMP sing 76 n n 
C5' "H5'1" CMP sing 77 n n 
C5' "H5'2" CMP sing 78 n n 
C4' O4' CMP sing 79 n n 
C4' C3' CMP sing 80 n n 
C4' H4' CMP sing 81 n n 
O4' C1' CMP sing 82 n n 
C3' O3' CMP sing 83 n n 
C3' C2' CMP sing 84 n n 
C3' H3' CMP sing 85 n n 
C2' O2' CMP sing 86 n n 
C2' C1' CMP sing 87 n n 
C2' H2' CMP sing 88 n n 
O2' HO2' CMP sing 89 n n 
C1' N9 CMP sing 90 n n 
C1' H1' CMP sing 91 n n 
N9 C8 CMP sing 92 n y 
N9 C4 CMP sing 93 n y 
C8 N7 CMP doub 94 n y 
C8 H8 CMP sing 95 n n 
N7 C5 CMP sing 96 n y 
C5 C6 CMP sing 97 n y 
C5 C4 CMP doub 98 n y 
C6 N6 CMP sing 99 n n 
C6 N1 CMP doub 100 n y 
N6 HN61 CMP sing 101 n n 
N6 HN62 CMP sing 102 n n 
N1 C2 CMP sing 103 n y 
C2 N3 CMP doub 104 n y 
C2 H2 CMP sing 105 n n 
N3 C4 CMP sing 106 n y 
#
_atom_sites.entry_id                     7NP4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CMP A 1 1001 1001 CMP CMP . 
F 2 CMP B 1 1001 1001 CMP CMP . 
G 2 CMP C 1 1001 1001 CMP CMP . 
H 2 CMP D 1 1001 1001 CMP CMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P CMP . . . F 2 123.263 88.367 161.38 1 158.05 ? P CMP 1001 B 1 
HETATM 2 O O1P CMP . . . F 2 122.297 89.464 161.522 1 158.05 ? O1P CMP 1001 B 1 
HETATM 3 O O2P CMP . . . F 2 124.214 88.088 162.468 1 158.05 ? O2P CMP 1001 B 1 
HETATM 4 O O5' CMP . . . F 2 124.09 88.603 160.05 1 158.05 ? O5' CMP 1001 B 1 
HETATM 5 C C5' CMP . . . F 2 124.93 87.518 159.565 1 158.05 ? C5' CMP 1001 B 1 
HETATM 6 C C4' CMP . . . F 2 124.042 86.317 159.403 1 158.05 ? C4' CMP 1001 B 1 
HETATM 7 O O4' CMP . . . F 2 124.75 85.115 159.121 1 158.05 ? O4' CMP 1001 B 1 
HETATM 8 C C3' CMP . . . F 2 123.357 85.976 160.691 1 158.05 ? C3' CMP 1001 B 1 
HETATM 9 O O3' CMP . . . F 2 122.455 87.032 161.064 1 158.05 ? O3' CMP 1001 B 1 
HETATM 10 C C2' CMP . . . F 2 122.755 84.648 160.289 1 158.05 ? C2' CMP 1001 B 1 
HETATM 11 O O2' CMP . . . F 2 121.655 84.809 159.408 1 158.05 ? O2' CMP 1001 B 1 
HETATM 12 C C1' CMP . . . F 2 123.915 84.032 159.51 1 158.05 ? C1' CMP 1001 B 1 
HETATM 13 N N9 CMP . . . F 2 124.721 83.172 160.356 1 158.05 ? N9 CMP 1001 B 1 
HETATM 14 C C8 CMP . . . F 2 125.638 83.568 161.294 1 158.05 ? C8 CMP 1001 B 1 
HETATM 15 N N7 CMP . . . F 2 126.208 82.566 161.91 1 158.05 ? N7 CMP 1001 B 1 
HETATM 16 C C5 CMP . . . F 2 125.669 81.438 161.376 1 158.05 ? C5 CMP 1001 B 1 
HETATM 17 C C6 CMP . . . F 2 125.828 80.045 161.584 1 158.05 ? C6 CMP 1001 B 1 
HETATM 18 N N6 CMP . . . F 2 126.664 79.576 162.463 1 158.05 ? N6 CMP 1001 B 1 
HETATM 19 N N1 CMP . . . F 2 125.071 79.213 160.826 1 158.05 ? N1 CMP 1001 B 1 
HETATM 20 C C2 CMP . . . F 2 124.215 79.713 159.928 1 158.05 ? C2 CMP 1001 B 1 
HETATM 21 N N3 CMP . . . F 2 123.958 80.981 159.631 1 158.05 ? N3 CMP 1001 B 1 
HETATM 22 C C4 CMP . . . F 2 124.683 81.808 160.362 1 158.05 ? C4 CMP 1001 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           22 
#