data_7NPC # _model_server_result.job_id UuvqZWrYJ2ZKYXwt2WXtDw _model_server_result.datetime_utc '2024-10-10 16:24:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7npc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 7NPC # _exptl.entry_id 7NPC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NPC _cell.length_a 107.603 _cell.length_b 107.603 _cell.length_c 100.205 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NPC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7NPC _atom_sites.fract_transf_matrix[1][1] 0.009293 _atom_sites.fract_transf_matrix[1][2] 0.005366 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00998 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ULT A 1 601 601 ULT AS7 . C 3 GOL A 1 602 602 GOL GOL . D 4 HOH A 1 701 167 HOH HOH . D 4 HOH A 2 702 51 HOH HOH . D 4 HOH A 3 703 141 HOH HOH . D 4 HOH A 4 704 57 HOH HOH . D 4 HOH A 5 705 7 HOH HOH . D 4 HOH A 6 706 114 HOH HOH . D 4 HOH A 7 707 74 HOH HOH . D 4 HOH A 8 708 138 HOH HOH . D 4 HOH A 9 709 110 HOH HOH . D 4 HOH A 10 710 36 HOH HOH . D 4 HOH A 11 711 127 HOH HOH . D 4 HOH A 12 712 158 HOH HOH . D 4 HOH A 13 713 64 HOH HOH . D 4 HOH A 14 714 81 HOH HOH . D 4 HOH A 15 715 76 HOH HOH . D 4 HOH A 16 716 17 HOH HOH . D 4 HOH A 17 717 53 HOH HOH . D 4 HOH A 18 718 80 HOH HOH . D 4 HOH A 19 719 71 HOH HOH . D 4 HOH A 20 720 40 HOH HOH . D 4 HOH A 21 721 89 HOH HOH . D 4 HOH A 22 722 90 HOH HOH . D 4 HOH A 23 723 139 HOH HOH . D 4 HOH A 24 724 41 HOH HOH . D 4 HOH A 25 725 47 HOH HOH . D 4 HOH A 26 726 50 HOH HOH . D 4 HOH A 27 727 8 HOH HOH . D 4 HOH A 28 728 60 HOH HOH . D 4 HOH A 29 729 58 HOH HOH . D 4 HOH A 30 730 24 HOH HOH . D 4 HOH A 31 731 152 HOH HOH . D 4 HOH A 32 732 98 HOH HOH . D 4 HOH A 33 733 4 HOH HOH . D 4 HOH A 34 734 84 HOH HOH . D 4 HOH A 35 735 82 HOH HOH . D 4 HOH A 36 736 15 HOH HOH . D 4 HOH A 37 737 27 HOH HOH . D 4 HOH A 38 738 9 HOH HOH . D 4 HOH A 39 739 37 HOH HOH . D 4 HOH A 40 740 63 HOH HOH . D 4 HOH A 41 741 21 HOH HOH . D 4 HOH A 42 742 86 HOH HOH . D 4 HOH A 43 743 121 HOH HOH . D 4 HOH A 44 744 12 HOH HOH . D 4 HOH A 45 745 23 HOH HOH . D 4 HOH A 46 746 46 HOH HOH . D 4 HOH A 47 747 6 HOH HOH . D 4 HOH A 48 748 10 HOH HOH . D 4 HOH A 49 749 55 HOH HOH . D 4 HOH A 50 750 31 HOH HOH . D 4 HOH A 51 751 34 HOH HOH . D 4 HOH A 52 752 65 HOH HOH . D 4 HOH A 53 753 69 HOH HOH . D 4 HOH A 54 754 35 HOH HOH . D 4 HOH A 55 755 29 HOH HOH . D 4 HOH A 56 756 88 HOH HOH . D 4 HOH A 57 757 132 HOH HOH . D 4 HOH A 58 758 54 HOH HOH . D 4 HOH A 59 759 122 HOH HOH . D 4 HOH A 60 760 30 HOH HOH . D 4 HOH A 61 761 67 HOH HOH . D 4 HOH A 62 762 11 HOH HOH . D 4 HOH A 63 763 131 HOH HOH . D 4 HOH A 64 764 129 HOH HOH . D 4 HOH A 65 765 18 HOH HOH . D 4 HOH A 66 766 101 HOH HOH . D 4 HOH A 67 767 38 HOH HOH . D 4 HOH A 68 768 97 HOH HOH . D 4 HOH A 69 769 118 HOH HOH . D 4 HOH A 70 770 39 HOH HOH . D 4 HOH A 71 771 16 HOH HOH . D 4 HOH A 72 772 75 HOH HOH . D 4 HOH A 73 773 113 HOH HOH . D 4 HOH A 74 774 68 HOH HOH . D 4 HOH A 75 775 45 HOH HOH . D 4 HOH A 76 776 14 HOH HOH . D 4 HOH A 77 777 20 HOH HOH . D 4 HOH A 78 778 103 HOH HOH . D 4 HOH A 79 779 73 HOH HOH . D 4 HOH A 80 780 130 HOH HOH . D 4 HOH A 81 781 52 HOH HOH . D 4 HOH A 82 782 32 HOH HOH . D 4 HOH A 83 783 62 HOH HOH . D 4 HOH A 84 784 117 HOH HOH . D 4 HOH A 85 785 5 HOH HOH . D 4 HOH A 86 786 56 HOH HOH . D 4 HOH A 87 787 19 HOH HOH . D 4 HOH A 88 788 79 HOH HOH . D 4 HOH A 89 789 33 HOH HOH . D 4 HOH A 90 790 102 HOH HOH . D 4 HOH A 91 791 28 HOH HOH . D 4 HOH A 92 792 83 HOH HOH . D 4 HOH A 93 793 59 HOH HOH . D 4 HOH A 94 794 85 HOH HOH . D 4 HOH A 95 795 116 HOH HOH . D 4 HOH A 96 796 2 HOH HOH . D 4 HOH A 97 797 66 HOH HOH . D 4 HOH A 98 798 72 HOH HOH . D 4 HOH A 99 799 91 HOH HOH . D 4 HOH A 100 800 106 HOH HOH . D 4 HOH A 101 801 70 HOH HOH . D 4 HOH A 102 802 169 HOH HOH . D 4 HOH A 103 803 25 HOH HOH . D 4 HOH A 104 804 160 HOH HOH . D 4 HOH A 105 805 13 HOH HOH . D 4 HOH A 106 806 105 HOH HOH . D 4 HOH A 107 807 3 HOH HOH . D 4 HOH A 108 808 123 HOH HOH . D 4 HOH A 109 809 1 HOH HOH . D 4 HOH A 110 810 100 HOH HOH . D 4 HOH A 111 811 120 HOH HOH . D 4 HOH A 112 812 93 HOH HOH . D 4 HOH A 113 813 42 HOH HOH . D 4 HOH A 114 814 95 HOH HOH . D 4 HOH A 115 815 22 HOH HOH . D 4 HOH A 116 816 49 HOH HOH . D 4 HOH A 117 817 166 HOH HOH . D 4 HOH A 118 818 172 HOH HOH . D 4 HOH A 119 819 164 HOH HOH . D 4 HOH A 120 820 111 HOH HOH . D 4 HOH A 121 821 147 HOH HOH . D 4 HOH A 122 822 26 HOH HOH . D 4 HOH A 123 823 96 HOH HOH . D 4 HOH A 124 824 87 HOH HOH . D 4 HOH A 125 825 48 HOH HOH . D 4 HOH A 126 826 112 HOH HOH . D 4 HOH A 127 827 170 HOH HOH . D 4 HOH A 128 828 156 HOH HOH . D 4 HOH A 129 829 44 HOH HOH . D 4 HOH A 130 830 144 HOH HOH . D 4 HOH A 131 831 94 HOH HOH . D 4 HOH A 132 832 159 HOH HOH . D 4 HOH A 133 833 171 HOH HOH . D 4 HOH A 134 834 78 HOH HOH . D 4 HOH A 135 835 134 HOH HOH . D 4 HOH A 136 836 161 HOH HOH . D 4 HOH A 137 837 92 HOH HOH . D 4 HOH A 138 838 165 HOH HOH . D 4 HOH A 139 839 168 HOH HOH . D 4 HOH A 140 840 109 HOH HOH . D 4 HOH A 141 841 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 10.741 -46.187 -18.462 1 59.25 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . C 3 12.048 -46.596 -18.856 1 59.27 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . C 3 10.025 -47.307 -17.75 1 59.07 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . C 3 8.738 -46.906 -17.297 1 44.41 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . C 3 9.861 -48.534 -18.613 1 63.05 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . C 3 9.663 -49.675 -17.791 1 65.43 ? O3 GOL 602 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #