data_7NPJ # _model_server_result.job_id qx2JLcRCnKc8NZRXWkYPqA _model_server_result.datetime_utc '2025-08-05 20:06:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7npj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 7NPJ # _exptl.entry_id 7NPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.21 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-phenoxy-3-pyridinamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.12 _cell.angle_gamma 90 _cell.entry_id 7NPJ _cell.length_a 84.34 _cell.length_b 132.813 _cell.length_c 122.819 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I 1 1 E,F,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H10 N2 O' _chem_comp.formula_weight 186.21 _chem_comp.id UKK _chem_comp.mon_nstd_flag . _chem_comp.name 6-phenoxy-3-pyridinamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-phenoxypyridin-3-amine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 UKK doub 356 n y C13 C12 UKK sing 357 n y C14 C09 UKK sing 358 n y O08 C09 UKK sing 359 n n O08 C05 UKK sing 360 n n C12 C11 UKK doub 361 n y C09 C10 UKK doub 362 n y N04 C05 UKK doub 363 n y N04 C03 UKK sing 364 n y C05 C06 UKK sing 365 n y C10 C11 UKK sing 366 n y C03 C02 UKK doub 367 n y C06 C07 UKK doub 368 n y C02 C07 UKK sing 369 n y C02 N01 UKK sing 370 n n C10 H1 UKK sing 371 n n C13 H2 UKK sing 372 n n C03 H3 UKK sing 373 n n C06 H4 UKK sing 374 n n C07 H5 UKK sing 375 n n C11 H6 UKK sing 376 n n C12 H7 UKK sing 377 n n C14 H8 UKK sing 378 n n N01 H9 UKK sing 379 n n N01 H10 UKK sing 380 n n # _atom_sites.entry_id 7NPJ _atom_sites.fract_transf_matrix[1][1] 0.011857 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000024 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id I _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id UKK _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id UKK _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 UKK . . . I 2 23.868 -13.052 -4.766 1 69.82 ? C10 UKK 401 B 1 HETATM 2 C C13 UKK . . . I 2 24.568 -11.443 -6.893 1 81.01 ? C13 UKK 401 B 1 HETATM 3 C C02 UKK . . . I 2 19.129 -14.212 -2.64 1 70.68 ? C02 UKK 401 B 1 HETATM 4 C C03 UKK . . . I 2 18.751 -14.51 -3.97 1 69.97 ? C03 UKK 401 B 1 HETATM 5 C C05 UKK . . . I 2 20.83 -13.795 -4.797 1 78.42 ? C05 UKK 401 B 1 HETATM 6 C C06 UKK . . . I 2 21.238 -13.481 -3.489 1 72.25 ? C06 UKK 401 B 1 HETATM 7 C C07 UKK . . . I 2 20.396 -13.684 -2.392 1 69.83 ? C07 UKK 401 B 1 HETATM 8 C C09 UKK . . . I 2 22.954 -12.934 -5.819 1 78.27 ? C09 UKK 401 B 1 HETATM 9 C C11 UKK . . . I 2 25.082 -12.356 -4.753 1 63.71 ? C11 UKK 401 B 1 HETATM 10 C C12 UKK . . . I 2 25.447 -11.564 -5.825 1 66.03 ? C12 UKK 401 B 1 HETATM 11 C C14 UKK . . . I 2 23.347 -12.125 -6.892 1 89.2 ? C14 UKK 401 B 1 HETATM 12 N N01 UKK . . . I 2 18.261 -14.412 -1.479 1 64.78 ? N01 UKK 401 B 1 HETATM 13 N N04 UKK . . . I 2 19.589 -14.302 -4.994 1 75.04 ? N04 UKK 401 B 1 HETATM 14 O O08 UKK . . . I 2 21.7 -13.61 -5.918 1 74.23 ? O08 UKK 401 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #