data_7NPY
#
_model_server_result.job_id            tIwGZWIwmjhhP8hEuQgLZg 
_model_server_result.datetime_utc      '2024-11-05 00:06:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7npy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    7NPY 
#
_exptl.entry_id    7NPY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              323.389 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-(phenylmethyl)pyridine-2,4-dicarboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NPY 
_cell.length_a            72.047 
_cell.length_b            52.31 
_cell.length_c            32.087 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NPY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H21 N3 O2' 
_chem_comp.formula_weight    323.389 
_chem_comp.id                UL5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-(phenylmethyl)pyridine-2,4-dicarboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C N UL5 sing 367 n n 
O C1 UL5 doub 368 n n 
N C1 UL5 sing 369 n n 
C1 C2 UL5 sing 370 n n 
C2 C3 UL5 doub 371 n y 
C2 N1 UL5 sing 372 n y 
C3 C4 UL5 sing 373 n y 
N1 C6 UL5 doub 374 n y 
C4 C14 UL5 sing 375 n n 
C4 C5 UL5 doub 376 n y 
C18 C17 UL5 sing 377 n n 
C6 C5 UL5 sing 378 n y 
C6 C7 UL5 sing 379 n n 
N2 C14 UL5 sing 380 n n 
N2 C15 UL5 sing 381 n n 
C17 C15 UL5 sing 382 n n 
C17 C16 UL5 sing 383 n n 
C14 O1 UL5 doub 384 n n 
C15 C16 UL5 sing 385 n n 
C7 C8 UL5 sing 386 n n 
C9 C8 UL5 doub 387 n y 
C9 C10 UL5 sing 388 n y 
C8 C13 UL5 sing 389 n y 
C10 C11 UL5 doub 390 n y 
C13 C12 UL5 doub 391 n y 
C11 C12 UL5 sing 392 n y 
C5 H1 UL5 sing 393 n n 
C7 H2 UL5 sing 394 n n 
C7 H3 UL5 sing 395 n n 
C10 H4 UL5 sing 396 n n 
C13 H5 UL5 sing 397 n n 
C15 H6 UL5 sing 398 n n 
C17 H7 UL5 sing 399 n n 
N2 H8 UL5 sing 400 n n 
C18 H9 UL5 sing 401 n n 
C18 H10 UL5 sing 402 n n 
C18 H11 UL5 sing 403 n n 
C16 H12 UL5 sing 404 n n 
C16 H13 UL5 sing 405 n n 
C3 H14 UL5 sing 406 n n 
N H15 UL5 sing 407 n n 
C H16 UL5 sing 408 n n 
C H17 UL5 sing 409 n n 
C H18 UL5 sing 410 n n 
C12 H19 UL5 sing 411 n n 
C11 H20 UL5 sing 412 n n 
C9 H21 UL5 sing 413 n n 
#
_atom_sites.entry_id                     7NPY 
_atom_sites.fract_transf_matrix[1][1]    0.01388 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031165 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UL5 AAA 1 501 4000 UL5 LIG . 
C 3 EDO AAA 1 502 1 EDO EDO . 
D 3 EDO AAA 1 503 2 EDO EDO . 
E 3 EDO AAA 1 504 3 EDO EDO . 
F 4 HOH AAA 1 601 111 HOH HOH . 
F 4 HOH AAA 2 602 132 HOH HOH . 
F 4 HOH AAA 3 603 29 HOH HOH . 
F 4 HOH AAA 4 604 69 HOH HOH . 
F 4 HOH AAA 5 605 85 HOH HOH . 
F 4 HOH AAA 6 606 35 HOH HOH . 
F 4 HOH AAA 7 607 144 HOH HOH . 
F 4 HOH AAA 8 608 152 HOH HOH . 
F 4 HOH AAA 9 609 9 HOH HOH . 
F 4 HOH AAA 10 610 133 HOH HOH . 
F 4 HOH AAA 11 611 5 HOH HOH . 
F 4 HOH AAA 12 612 21 HOH HOH . 
F 4 HOH AAA 13 613 61 HOH HOH . 
F 4 HOH AAA 14 614 59 HOH HOH . 
F 4 HOH AAA 15 615 18 HOH HOH . 
F 4 HOH AAA 16 616 1 HOH HOH . 
F 4 HOH AAA 17 617 115 HOH HOH . 
F 4 HOH AAA 18 618 103 HOH HOH . 
F 4 HOH AAA 19 619 42 HOH HOH . 
F 4 HOH AAA 20 620 8 HOH HOH . 
F 4 HOH AAA 21 621 153 HOH HOH . 
F 4 HOH AAA 22 622 74 HOH HOH . 
F 4 HOH AAA 23 623 137 HOH HOH . 
F 4 HOH AAA 24 624 75 HOH HOH . 
F 4 HOH AAA 25 625 63 HOH HOH . 
F 4 HOH AAA 26 626 51 HOH HOH . 
F 4 HOH AAA 27 627 114 HOH HOH . 
F 4 HOH AAA 28 628 78 HOH HOH . 
F 4 HOH AAA 29 629 84 HOH HOH . 
F 4 HOH AAA 30 630 36 HOH HOH . 
F 4 HOH AAA 31 631 56 HOH HOH . 
F 4 HOH AAA 32 632 32 HOH HOH . 
F 4 HOH AAA 33 633 31 HOH HOH . 
F 4 HOH AAA 34 634 12 HOH HOH . 
F 4 HOH AAA 35 635 47 HOH HOH . 
F 4 HOH AAA 36 636 28 HOH HOH . 
F 4 HOH AAA 37 637 24 HOH HOH . 
F 4 HOH AAA 38 638 64 HOH HOH . 
F 4 HOH AAA 39 639 112 HOH HOH . 
F 4 HOH AAA 40 640 13 HOH HOH . 
F 4 HOH AAA 41 641 15 HOH HOH . 
F 4 HOH AAA 42 642 76 HOH HOH . 
F 4 HOH AAA 43 643 96 HOH HOH . 
F 4 HOH AAA 44 644 6 HOH HOH . 
F 4 HOH AAA 45 645 113 HOH HOH . 
F 4 HOH AAA 46 646 87 HOH HOH . 
F 4 HOH AAA 47 647 11 HOH HOH . 
F 4 HOH AAA 48 648 46 HOH HOH . 
F 4 HOH AAA 49 649 27 HOH HOH . 
F 4 HOH AAA 50 650 7 HOH HOH . 
F 4 HOH AAA 51 651 125 HOH HOH . 
F 4 HOH AAA 52 652 22 HOH HOH . 
F 4 HOH AAA 53 653 82 HOH HOH . 
F 4 HOH AAA 54 654 48 HOH HOH . 
F 4 HOH AAA 55 655 55 HOH HOH . 
F 4 HOH AAA 56 656 83 HOH HOH . 
F 4 HOH AAA 57 657 79 HOH HOH . 
F 4 HOH AAA 58 658 104 HOH HOH . 
F 4 HOH AAA 59 659 108 HOH HOH . 
F 4 HOH AAA 60 660 20 HOH HOH . 
F 4 HOH AAA 61 661 2 HOH HOH . 
F 4 HOH AAA 62 662 136 HOH HOH . 
F 4 HOH AAA 63 663 135 HOH HOH . 
F 4 HOH AAA 64 664 110 HOH HOH . 
F 4 HOH AAA 65 665 16 HOH HOH . 
F 4 HOH AAA 66 666 91 HOH HOH . 
F 4 HOH AAA 67 667 93 HOH HOH . 
F 4 HOH AAA 68 668 77 HOH HOH . 
F 4 HOH AAA 69 669 154 HOH HOH . 
F 4 HOH AAA 70 670 4 HOH HOH . 
F 4 HOH AAA 71 671 68 HOH HOH . 
F 4 HOH AAA 72 672 37 HOH HOH . 
F 4 HOH AAA 73 673 41 HOH HOH . 
F 4 HOH AAA 74 674 10 HOH HOH . 
F 4 HOH AAA 75 675 161 HOH HOH . 
F 4 HOH AAA 76 676 14 HOH HOH . 
F 4 HOH AAA 77 677 17 HOH HOH . 
F 4 HOH AAA 78 678 148 HOH HOH . 
F 4 HOH AAA 79 679 45 HOH HOH . 
F 4 HOH AAA 80 680 105 HOH HOH . 
F 4 HOH AAA 81 681 43 HOH HOH . 
F 4 HOH AAA 82 682 23 HOH HOH . 
F 4 HOH AAA 83 683 140 HOH HOH . 
F 4 HOH AAA 84 684 147 HOH HOH . 
F 4 HOH AAA 85 685 50 HOH HOH . 
F 4 HOH AAA 86 686 131 HOH HOH . 
F 4 HOH AAA 87 687 3 HOH HOH . 
F 4 HOH AAA 88 688 53 HOH HOH . 
F 4 HOH AAA 89 689 90 HOH HOH . 
F 4 HOH AAA 90 690 19 HOH HOH . 
F 4 HOH AAA 91 691 26 HOH HOH . 
F 4 HOH AAA 92 692 30 HOH HOH . 
F 4 HOH AAA 93 693 39 HOH HOH . 
F 4 HOH AAA 94 694 25 HOH HOH . 
F 4 HOH AAA 95 695 52 HOH HOH . 
F 4 HOH AAA 96 696 33 HOH HOH . 
F 4 HOH AAA 97 697 73 HOH HOH . 
F 4 HOH AAA 98 698 109 HOH HOH . 
F 4 HOH AAA 99 699 138 HOH HOH . 
F 4 HOH AAA 100 700 159 HOH HOH . 
F 4 HOH AAA 101 701 38 HOH HOH . 
F 4 HOH AAA 102 702 44 HOH HOH . 
F 4 HOH AAA 103 703 121 HOH HOH . 
F 4 HOH AAA 104 704 120 HOH HOH . 
F 4 HOH AAA 105 705 160 HOH HOH . 
F 4 HOH AAA 106 706 130 HOH HOH . 
F 4 HOH AAA 107 707 156 HOH HOH . 
F 4 HOH AAA 108 708 143 HOH HOH . 
F 4 HOH AAA 109 709 34 HOH HOH . 
F 4 HOH AAA 110 710 62 HOH HOH . 
F 4 HOH AAA 111 711 151 HOH HOH . 
F 4 HOH AAA 112 712 70 HOH HOH . 
F 4 HOH AAA 113 713 134 HOH HOH . 
F 4 HOH AAA 114 714 57 HOH HOH . 
F 4 HOH AAA 115 715 155 HOH HOH . 
F 4 HOH AAA 116 716 119 HOH HOH . 
F 4 HOH AAA 117 717 107 HOH HOH . 
F 4 HOH AAA 118 718 95 HOH HOH . 
F 4 HOH AAA 119 719 71 HOH HOH . 
F 4 HOH AAA 120 720 67 HOH HOH . 
F 4 HOH AAA 121 721 102 HOH HOH . 
F 4 HOH AAA 122 722 118 HOH HOH . 
F 4 HOH AAA 123 723 40 HOH HOH . 
F 4 HOH AAA 124 724 128 HOH HOH . 
F 4 HOH AAA 125 725 139 HOH HOH . 
F 4 HOH AAA 126 726 86 HOH HOH . 
F 4 HOH AAA 127 727 94 HOH HOH . 
F 4 HOH AAA 128 728 81 HOH HOH . 
F 4 HOH AAA 129 729 98 HOH HOH . 
F 4 HOH AAA 130 730 106 HOH HOH . 
F 4 HOH AAA 131 731 124 HOH HOH . 
F 4 HOH AAA 132 732 162 HOH HOH . 
F 4 HOH AAA 133 733 58 HOH HOH . 
F 4 HOH AAA 134 734 145 HOH HOH . 
F 4 HOH AAA 135 735 141 HOH HOH . 
F 4 HOH AAA 136 736 126 HOH HOH . 
F 4 HOH AAA 137 737 89 HOH HOH . 
F 4 HOH AAA 138 738 142 HOH HOH . 
F 4 HOH AAA 139 739 99 HOH HOH . 
F 4 HOH AAA 140 740 49 HOH HOH . 
F 4 HOH AAA 141 741 92 HOH HOH . 
F 4 HOH AAA 142 742 146 HOH HOH . 
F 4 HOH AAA 143 743 97 HOH HOH . 
F 4 HOH AAA 144 744 150 HOH HOH . 
F 4 HOH AAA 145 745 65 HOH HOH . 
F 4 HOH AAA 146 746 88 HOH HOH . 
F 4 HOH AAA 147 747 122 HOH HOH . 
F 4 HOH AAA 148 748 66 HOH HOH . 
F 4 HOH AAA 149 749 100 HOH HOH . 
F 4 HOH AAA 150 750 158 HOH HOH . 
F 4 HOH AAA 151 751 80 HOH HOH . 
F 4 HOH AAA 152 752 117 HOH HOH . 
F 4 HOH AAA 153 753 116 HOH HOH . 
F 4 HOH AAA 154 754 54 HOH HOH . 
F 4 HOH AAA 155 755 149 HOH HOH . 
F 4 HOH AAA 156 756 60 HOH HOH . 
F 4 HOH AAA 157 757 157 HOH HOH . 
F 4 HOH AAA 158 758 129 HOH HOH . 
F 4 HOH AAA 159 759 101 HOH HOH . 
F 4 HOH AAA 160 760 127 HOH HOH . 
F 4 HOH AAA 161 761 72 HOH HOH . 
F 4 HOH AAA 162 762 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 UL5 . . . B 2 41.363 17.445 8.555 1 20.05 ? N1 UL5 501 AAA 1 
HETATM 2 C C4 UL5 . . . B 2 44.054 17.505 9.318 1 20.29 ? C4 UL5 501 AAA 1 
HETATM 3 C C5 UL5 . . . B 2 43.112 18.308 9.948 1 20.61 ? C5 UL5 501 AAA 1 
HETATM 4 C C6 UL5 . . . B 2 41.789 18.256 9.546 1 20.85 ? C6 UL5 501 AAA 1 
HETATM 5 C C7 UL5 . . . B 2 40.732 19.092 10.225 1 21.83 ? C7 UL5 501 AAA 1 
HETATM 6 C C8 UL5 . . . B 2 40.233 18.383 11.463 1 22.87 ? C8 UL5 501 AAA 1 
HETATM 7 C C10 UL5 . . . B 2 38.965 16.609 12.475 1 23.26 ? C10 UL5 501 AAA 1 
HETATM 8 C C13 UL5 . . . B 2 40.644 18.776 12.728 1 24.46 ? C13 UL5 501 AAA 1 
HETATM 9 C C15 UL5 . . . B 2 47.614 16.42 10.083 1 21.82 ? C15 UL5 501 AAA 1 
HETATM 10 C C17 UL5 . . . B 2 48.422 15.211 9.729 1 21.7 ? C17 UL5 501 AAA 1 
HETATM 11 O O1 UL5 . . . B 2 45.86 18.59 10.425 1 20.94 ? O1 UL5 501 AAA 1 
HETATM 12 C C14 UL5 . . . B 2 45.464 17.593 9.813 1 20.79 ? C14 UL5 501 AAA 1 
HETATM 13 N N2 UL5 . . . B 2 46.259 16.541 9.562 1 20.68 ? N2 UL5 501 AAA 1 
HETATM 14 C C18 UL5 . . . B 2 49.916 15.373 9.457 1 22.14 ? C18 UL5 501 AAA 1 
HETATM 15 C C16 UL5 . . . B 2 47.873 15.393 11.133 1 21.74 ? C16 UL5 501 AAA 1 
HETATM 16 C C3 UL5 . . . B 2 43.633 16.672 8.283 1 19.59 ? C3 UL5 501 AAA 1 
HETATM 17 C C2 UL5 . . . B 2 42.275 16.671 7.943 1 19.28 ? C2 UL5 501 AAA 1 
HETATM 18 C C1 UL5 . . . B 2 41.779 15.752 6.859 1 18.4 ? C1 UL5 501 AAA 1 
HETATM 19 O O UL5 . . . B 2 42.502 14.877 6.372 1 18.01 ? O UL5 501 AAA 1 
HETATM 20 N N UL5 . . . B 2 40.512 15.937 6.494 1 17.89 ? N UL5 501 AAA 1 
HETATM 21 C C UL5 . . . B 2 39.82 15.023 5.605 1 18.1 ? C UL5 501 AAA 1 
HETATM 22 C C12 UL5 . . . B 2 40.219 18.089 13.854 1 25.32 ? C12 UL5 501 AAA 1 
HETATM 23 C C11 UL5 . . . B 2 39.383 17 13.726 1 23.3 ? C11 UL5 501 AAA 1 
HETATM 24 C C9 UL5 . . . B 2 39.385 17.295 11.353 1 22.94 ? C9 UL5 501 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           24 
#