data_7NPZ # _model_server_result.job_id 4sAYXQQTQsv0CG4AUuDRFQ _model_server_result.datetime_utc '2024-11-08 21:07:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7npz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 7NPZ # _exptl.entry_id 7NPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.388 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-[(1~{R})-1-phenylethyl]pyridine-3,5-dicarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NPZ _cell.length_a 71.86 _cell.length_b 52.31 _cell.length_c 31.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N3 O3' _chem_comp.formula_weight 339.388 _chem_comp.id ULH _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-[(1~{R})-1-phenylethyl]pyridine-3,5-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N05 ULH sing 367 n n O08 C07 ULH doub 368 n n N05 C07 ULH sing 369 n n C07 C09 ULH sing 370 n n C09 C10 ULH doub 371 n n C09 C33 ULH sing 372 n n O34 C33 ULH doub 373 n n C10 C12 ULH sing 374 n n C33 N15 ULH sing 375 n n C12 C35 ULH sing 376 n n C12 C13 ULH doub 377 n n N15 C13 ULH sing 378 n n N15 C16 ULH sing 379 n n N37 C35 ULH sing 380 n n N37 C39 ULH sing 381 n n C41 C39 ULH sing 382 n n C41 C44 ULH sing 383 n n C35 O36 ULH doub 384 n n C39 C44 ULH sing 385 n n C18 C16 ULH sing 386 n n C16 C22 ULH sing 387 n n C22 C23 ULH doub 388 n y C22 C31 ULH sing 389 n y C23 C25 ULH sing 390 n y C31 C29 ULH doub 391 n y C25 C27 ULH doub 392 n y C29 C27 ULH sing 393 n y C10 H1 ULH sing 394 n n C13 H2 ULH sing 395 n n C01 H3 ULH sing 396 n n C01 H4 ULH sing 397 n n C01 H5 ULH sing 398 n n N05 H6 ULH sing 399 n n C16 H7 ULH sing 400 n n C18 H8 ULH sing 401 n n C18 H9 ULH sing 402 n n C18 H10 ULH sing 403 n n C23 H11 ULH sing 404 n n C25 H12 ULH sing 405 n n C27 H13 ULH sing 406 n n C29 H14 ULH sing 407 n n C31 H15 ULH sing 408 n n N37 H16 ULH sing 409 n n C39 H17 ULH sing 410 n n C41 H18 ULH sing 411 n n C41 H19 ULH sing 412 n n C44 H20 ULH sing 413 n n C44 H21 ULH sing 414 n n # _atom_sites.entry_id 7NPZ _atom_sites.fract_transf_matrix[1][1] 0.013916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031279 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO AAA 1 501 1 EDO EDO . C 2 EDO AAA 1 502 2 EDO EDO . D 2 EDO AAA 1 503 3 EDO EDO . E 3 ULH AAA 1 504 1 ULH LIG . F 4 HOH AAA 1 601 44 HOH HOH . F 4 HOH AAA 2 602 195 HOH HOH . F 4 HOH AAA 3 603 28 HOH HOH . F 4 HOH AAA 4 604 143 HOH HOH . F 4 HOH AAA 5 605 8 HOH HOH . F 4 HOH AAA 6 606 4 HOH HOH . F 4 HOH AAA 7 607 91 HOH HOH . F 4 HOH AAA 8 608 43 HOH HOH . F 4 HOH AAA 9 609 170 HOH HOH . F 4 HOH AAA 10 610 69 HOH HOH . F 4 HOH AAA 11 611 106 HOH HOH . F 4 HOH AAA 12 612 67 HOH HOH . F 4 HOH AAA 13 613 142 HOH HOH . F 4 HOH AAA 14 614 38 HOH HOH . F 4 HOH AAA 15 615 83 HOH HOH . F 4 HOH AAA 16 616 66 HOH HOH . F 4 HOH AAA 17 617 20 HOH HOH . F 4 HOH AAA 18 618 33 HOH HOH . F 4 HOH AAA 19 619 62 HOH HOH . F 4 HOH AAA 20 620 214 HOH HOH . F 4 HOH AAA 21 621 151 HOH HOH . F 4 HOH AAA 22 622 14 HOH HOH . F 4 HOH AAA 23 623 57 HOH HOH . F 4 HOH AAA 24 624 72 HOH HOH . F 4 HOH AAA 25 625 172 HOH HOH . F 4 HOH AAA 26 626 51 HOH HOH . F 4 HOH AAA 27 627 47 HOH HOH . F 4 HOH AAA 28 628 189 HOH HOH . F 4 HOH AAA 29 629 206 HOH HOH . F 4 HOH AAA 30 630 65 HOH HOH . F 4 HOH AAA 31 631 6 HOH HOH . F 4 HOH AAA 32 632 61 HOH HOH . F 4 HOH AAA 33 633 5 HOH HOH . F 4 HOH AAA 34 634 13 HOH HOH . F 4 HOH AAA 35 635 121 HOH HOH . F 4 HOH AAA 36 636 86 HOH HOH . F 4 HOH AAA 37 637 36 HOH HOH . F 4 HOH AAA 38 638 35 HOH HOH . F 4 HOH AAA 39 639 100 HOH HOH . F 4 HOH AAA 40 640 87 HOH HOH . F 4 HOH AAA 41 641 7 HOH HOH . F 4 HOH AAA 42 642 80 HOH HOH . F 4 HOH AAA 43 643 137 HOH HOH . F 4 HOH AAA 44 644 18 HOH HOH . F 4 HOH AAA 45 645 10 HOH HOH . F 4 HOH AAA 46 646 161 HOH HOH . F 4 HOH AAA 47 647 9 HOH HOH . F 4 HOH AAA 48 648 39 HOH HOH . F 4 HOH AAA 49 649 96 HOH HOH . F 4 HOH AAA 50 650 70 HOH HOH . F 4 HOH AAA 51 651 26 HOH HOH . F 4 HOH AAA 52 652 97 HOH HOH . F 4 HOH AAA 53 653 59 HOH HOH . F 4 HOH AAA 54 654 29 HOH HOH . F 4 HOH AAA 55 655 147 HOH HOH . F 4 HOH AAA 56 656 174 HOH HOH . F 4 HOH AAA 57 657 25 HOH HOH . F 4 HOH AAA 58 658 162 HOH HOH . F 4 HOH AAA 59 659 21 HOH HOH . F 4 HOH AAA 60 660 2 HOH HOH . F 4 HOH AAA 61 661 48 HOH HOH . F 4 HOH AAA 62 662 27 HOH HOH . F 4 HOH AAA 63 663 12 HOH HOH . F 4 HOH AAA 64 664 68 HOH HOH . F 4 HOH AAA 65 665 63 HOH HOH . F 4 HOH AAA 66 666 190 HOH HOH . F 4 HOH AAA 67 667 23 HOH HOH . F 4 HOH AAA 68 668 217 HOH HOH . F 4 HOH AAA 69 669 167 HOH HOH . F 4 HOH AAA 70 670 130 HOH HOH . F 4 HOH AAA 71 671 187 HOH HOH . F 4 HOH AAA 72 672 16 HOH HOH . F 4 HOH AAA 73 673 60 HOH HOH . F 4 HOH AAA 74 674 113 HOH HOH . F 4 HOH AAA 75 675 179 HOH HOH . F 4 HOH AAA 76 676 40 HOH HOH . F 4 HOH AAA 77 677 93 HOH HOH . F 4 HOH AAA 78 678 45 HOH HOH . F 4 HOH AAA 79 679 49 HOH HOH . F 4 HOH AAA 80 680 216 HOH HOH . F 4 HOH AAA 81 681 191 HOH HOH . F 4 HOH AAA 82 682 176 HOH HOH . F 4 HOH AAA 83 683 17 HOH HOH . F 4 HOH AAA 84 684 144 HOH HOH . F 4 HOH AAA 85 685 41 HOH HOH . F 4 HOH AAA 86 686 3 HOH HOH . F 4 HOH AAA 87 687 15 HOH HOH . F 4 HOH AAA 88 688 52 HOH HOH . F 4 HOH AAA 89 689 95 HOH HOH . F 4 HOH AAA 90 690 105 HOH HOH . F 4 HOH AAA 91 691 135 HOH HOH . F 4 HOH AAA 92 692 152 HOH HOH . F 4 HOH AAA 93 693 53 HOH HOH . F 4 HOH AAA 94 694 197 HOH HOH . F 4 HOH AAA 95 695 22 HOH HOH . F 4 HOH AAA 96 696 24 HOH HOH . F 4 HOH AAA 97 697 75 HOH HOH . F 4 HOH AAA 98 698 94 HOH HOH . F 4 HOH AAA 99 699 111 HOH HOH . F 4 HOH AAA 100 700 182 HOH HOH . F 4 HOH AAA 101 701 213 HOH HOH . F 4 HOH AAA 102 702 181 HOH HOH . F 4 HOH AAA 103 703 30 HOH HOH . F 4 HOH AAA 104 704 163 HOH HOH . F 4 HOH AAA 105 705 31 HOH HOH . F 4 HOH AAA 106 706 211 HOH HOH . F 4 HOH AAA 107 707 50 HOH HOH . F 4 HOH AAA 108 708 19 HOH HOH . F 4 HOH AAA 109 709 42 HOH HOH . F 4 HOH AAA 110 710 11 HOH HOH . F 4 HOH AAA 111 711 205 HOH HOH . F 4 HOH AAA 112 712 188 HOH HOH . F 4 HOH AAA 113 713 1 HOH HOH . F 4 HOH AAA 114 714 212 HOH HOH . F 4 HOH AAA 115 715 116 HOH HOH . F 4 HOH AAA 116 716 73 HOH HOH . F 4 HOH AAA 117 717 37 HOH HOH . F 4 HOH AAA 118 718 78 HOH HOH . F 4 HOH AAA 119 719 56 HOH HOH . F 4 HOH AAA 120 720 84 HOH HOH . F 4 HOH AAA 121 721 104 HOH HOH . F 4 HOH AAA 122 722 92 HOH HOH . F 4 HOH AAA 123 723 117 HOH HOH . F 4 HOH AAA 124 724 145 HOH HOH . F 4 HOH AAA 125 725 204 HOH HOH . F 4 HOH AAA 126 726 112 HOH HOH . F 4 HOH AAA 127 727 134 HOH HOH . F 4 HOH AAA 128 728 173 HOH HOH . F 4 HOH AAA 129 729 210 HOH HOH . F 4 HOH AAA 130 730 32 HOH HOH . F 4 HOH AAA 131 731 140 HOH HOH . F 4 HOH AAA 132 732 198 HOH HOH . F 4 HOH AAA 133 733 141 HOH HOH . F 4 HOH AAA 134 734 109 HOH HOH . F 4 HOH AAA 135 735 133 HOH HOH . F 4 HOH AAA 136 736 55 HOH HOH . F 4 HOH AAA 137 737 200 HOH HOH . F 4 HOH AAA 138 738 124 HOH HOH . F 4 HOH AAA 139 739 58 HOH HOH . F 4 HOH AAA 140 740 155 HOH HOH . F 4 HOH AAA 141 741 193 HOH HOH . F 4 HOH AAA 142 742 184 HOH HOH . F 4 HOH AAA 143 743 139 HOH HOH . F 4 HOH AAA 144 744 209 HOH HOH . F 4 HOH AAA 145 745 156 HOH HOH . F 4 HOH AAA 146 746 79 HOH HOH . F 4 HOH AAA 147 747 85 HOH HOH . F 4 HOH AAA 148 748 115 HOH HOH . F 4 HOH AAA 149 749 71 HOH HOH . F 4 HOH AAA 150 750 196 HOH HOH . F 4 HOH AAA 151 751 166 HOH HOH . F 4 HOH AAA 152 752 54 HOH HOH . F 4 HOH AAA 153 753 157 HOH HOH . F 4 HOH AAA 154 754 154 HOH HOH . F 4 HOH AAA 155 755 103 HOH HOH . F 4 HOH AAA 156 756 101 HOH HOH . F 4 HOH AAA 157 757 208 HOH HOH . F 4 HOH AAA 158 758 183 HOH HOH . F 4 HOH AAA 159 759 46 HOH HOH . F 4 HOH AAA 160 760 34 HOH HOH . F 4 HOH AAA 161 761 77 HOH HOH . F 4 HOH AAA 162 762 119 HOH HOH . F 4 HOH AAA 163 763 125 HOH HOH . F 4 HOH AAA 164 764 127 HOH HOH . F 4 HOH AAA 165 765 177 HOH HOH . F 4 HOH AAA 166 766 126 HOH HOH . F 4 HOH AAA 167 767 107 HOH HOH . F 4 HOH AAA 168 768 128 HOH HOH . F 4 HOH AAA 169 769 64 HOH HOH . F 4 HOH AAA 170 770 215 HOH HOH . F 4 HOH AAA 171 771 153 HOH HOH . F 4 HOH AAA 172 772 88 HOH HOH . F 4 HOH AAA 173 773 164 HOH HOH . F 4 HOH AAA 174 774 120 HOH HOH . F 4 HOH AAA 175 775 74 HOH HOH . F 4 HOH AAA 176 776 76 HOH HOH . F 4 HOH AAA 177 777 201 HOH HOH . F 4 HOH AAA 178 778 178 HOH HOH . F 4 HOH AAA 179 779 185 HOH HOH . F 4 HOH AAA 180 780 202 HOH HOH . F 4 HOH AAA 181 781 102 HOH HOH . F 4 HOH AAA 182 782 122 HOH HOH . F 4 HOH AAA 183 783 90 HOH HOH . F 4 HOH AAA 184 784 114 HOH HOH . F 4 HOH AAA 185 785 98 HOH HOH . F 4 HOH AAA 186 786 159 HOH HOH . F 4 HOH AAA 187 787 199 HOH HOH . F 4 HOH AAA 188 788 168 HOH HOH . F 4 HOH AAA 189 789 81 HOH HOH . F 4 HOH AAA 190 790 108 HOH HOH . F 4 HOH AAA 191 791 131 HOH HOH . F 4 HOH AAA 192 792 207 HOH HOH . F 4 HOH AAA 193 793 165 HOH HOH . F 4 HOH AAA 194 794 123 HOH HOH . F 4 HOH AAA 195 795 132 HOH HOH . F 4 HOH AAA 196 796 150 HOH HOH . F 4 HOH AAA 197 797 99 HOH HOH . F 4 HOH AAA 198 798 146 HOH HOH . F 4 HOH AAA 199 799 149 HOH HOH . F 4 HOH AAA 200 800 118 HOH HOH . F 4 HOH AAA 201 801 158 HOH HOH . F 4 HOH AAA 202 802 169 HOH HOH . F 4 HOH AAA 203 803 110 HOH HOH . F 4 HOH AAA 204 804 180 HOH HOH . F 4 HOH AAA 205 805 82 HOH HOH . F 4 HOH AAA 206 806 186 HOH HOH . F 4 HOH AAA 207 807 148 HOH HOH . F 4 HOH AAA 208 808 129 HOH HOH . F 4 HOH AAA 209 809 192 HOH HOH . F 4 HOH AAA 210 810 138 HOH HOH . F 4 HOH AAA 211 811 136 HOH HOH . F 4 HOH AAA 212 812 89 HOH HOH . F 4 HOH AAA 213 813 160 HOH HOH . F 4 HOH AAA 214 814 171 HOH HOH . F 4 HOH AAA 215 815 194 HOH HOH . F 4 HOH AAA 216 816 203 HOH HOH . F 4 HOH AAA 217 817 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ULH . . . E 3 43.086 16.725 8.211 1 16.89 ? C10 ULH 504 AAA 1 HETATM 2 C C13 ULH . . . E 3 42.525 18.314 9.911 1 18.07 ? C13 ULH 504 AAA 1 HETATM 3 C C22 ULH . . . E 3 40.093 18.514 11.669 1 21.35 ? C22 ULH 504 AAA 1 HETATM 4 C C01 ULH . . . E 3 39.67 14.802 5.257 1 15.58 ? C01 ULH 504 AAA 1 HETATM 5 N N05 ULH . . . E 3 40.14 15.7 6.299 1 15.53 ? N05 ULH 504 AAA 1 HETATM 6 C C07 ULH . . . E 3 41.414 15.733 6.677 1 15.83 ? C07 ULH 504 AAA 1 HETATM 7 O O08 ULH . . . E 3 42.25 14.962 6.207 1 15.85 ? O08 ULH 504 AAA 1 HETATM 8 C C09 ULH . . . E 3 41.788 16.661 7.788 1 16.42 ? C09 ULH 504 AAA 1 HETATM 9 C C12 ULH . . . E 3 43.482 17.572 9.303 1 17.51 ? C12 ULH 504 AAA 1 HETATM 10 N N15 ULH . . . E 3 41.211 18.285 9.498 1 18.4 ? N15 ULH 504 AAA 1 HETATM 11 C C16 ULH . . . E 3 40.222 19.081 10.261 1 19.43 ? C16 ULH 504 AAA 1 HETATM 12 C C18 ULH . . . E 3 40.522 20.575 10.163 1 19.86 ? C18 ULH 504 AAA 1 HETATM 13 C C23 ULH . . . E 3 39.339 17.366 11.876 1 22.16 ? C23 ULH 504 AAA 1 HETATM 14 C C25 ULH . . . E 3 39.22 16.814 13.14 1 22.81 ? C25 ULH 504 AAA 1 HETATM 15 C C27 ULH . . . E 3 39.867 17.389 14.212 1 23.67 ? C27 ULH 504 AAA 1 HETATM 16 C C29 ULH . . . E 3 40.636 18.517 14.019 1 23.85 ? C29 ULH 504 AAA 1 HETATM 17 C C31 ULH . . . E 3 40.757 19.071 12.754 1 22.79 ? C31 ULH 504 AAA 1 HETATM 18 C C33 ULH . . . E 3 40.759 17.468 8.47 1 17.2 ? C33 ULH 504 AAA 1 HETATM 19 O O34 ULH . . . E 3 39.577 17.492 8.164 1 17.57 ? O34 ULH 504 AAA 1 HETATM 20 C C35 ULH . . . E 3 44.873 17.697 9.795 1 18.01 ? C35 ULH 504 AAA 1 HETATM 21 O O36 ULH . . . E 3 45.213 18.677 10.46 1 19.49 ? O36 ULH 504 AAA 1 HETATM 22 N N37 ULH . . . E 3 45.737 16.712 9.506 1 18.1 ? N37 ULH 504 AAA 1 HETATM 23 C C39 ULH . . . E 3 47.128 16.754 9.952 1 18.62 ? C39 ULH 504 AAA 1 HETATM 24 C C41 ULH . . . E 3 48.012 15.628 9.612 1 18.64 ? C41 ULH 504 AAA 1 HETATM 25 C C44 ULH . . . E 3 47.552 15.815 11.005 1 19.32 ? C44 ULH 504 AAA 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #