data_7NQ1 # _model_server_result.job_id VDYgGJtDHL-_3Z9Ka4UU5w _model_server_result.datetime_utc '2024-11-05 13:44:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nq1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 7NQ1 # _exptl.entry_id 7NQ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.388 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-[(~{S})-oxidanyl(phenyl)methyl]pyridine-2,4-dicarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NQ1 _cell.length_a 72.042 _cell.length_b 52.421 _cell.length_c 32.005 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NQ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N3 O3' _chem_comp.formula_weight 339.388 _chem_comp.id ULK _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}2-methyl-~{N}4-[(1~{S},2~{S})-2-methylcyclopropyl]-6-[(~{S})-oxidanyl(phenyl)methyl]pyridine-2,4-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 ULK sing 367 n n O04 C03 ULK doub 368 n n N02 C03 ULK sing 369 n n C03 C05 ULK sing 370 n n C05 C06 ULK doub 371 n y C05 N10 ULK sing 372 n y C06 C07 ULK sing 373 n y N10 C09 ULK doub 374 n y O12 C11 ULK sing 375 n n C07 C19 ULK sing 376 n n C07 C08 ULK doub 377 n y C09 C08 ULK sing 378 n y C09 C11 ULK sing 379 n n C25 C24 ULK sing 380 n n N21 C19 ULK sing 381 n n N21 C22 ULK sing 382 n n C24 C22 ULK sing 383 n n C24 C23 ULK sing 384 n n C19 O20 ULK doub 385 n n C11 C13 ULK sing 386 n n C22 C23 ULK sing 387 n n C18 C13 ULK doub 388 n y C18 C17 ULK sing 389 n y C13 C14 ULK sing 390 n y C17 C16 ULK doub 391 n y C14 C15 ULK doub 392 n y C16 C15 ULK sing 393 n y C15 H1 ULK sing 394 n n C17 H2 ULK sing 395 n n C22 H3 ULK sing 396 n n C24 H4 ULK sing 397 n n C01 H5 ULK sing 398 n n C01 H6 ULK sing 399 n n C01 H7 ULK sing 400 n n N02 H8 ULK sing 401 n n C06 H9 ULK sing 402 n n C08 H10 ULK sing 403 n n C11 H11 ULK sing 404 n n O12 H12 ULK sing 405 n n C14 H13 ULK sing 406 n n C16 H14 ULK sing 407 n n C18 H15 ULK sing 408 n n N21 H16 ULK sing 409 n n C23 H17 ULK sing 410 n n C23 H18 ULK sing 411 n n C25 H19 ULK sing 412 n n C25 H20 ULK sing 413 n n C25 H21 ULK sing 414 n n # _atom_sites.entry_id 7NQ1 _atom_sites.fract_transf_matrix[1][1] 0.013881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO AAA 1 501 1 EDO EDO . C 2 EDO AAA 1 502 2 EDO EDO . D 2 EDO AAA 1 503 3 EDO EDO . E 3 ULK AAA 1 504 1 ULK LIG . F 4 HOH AAA 1 601 43 HOH HOH . F 4 HOH AAA 2 602 80 HOH HOH . F 4 HOH AAA 3 603 28 HOH HOH . F 4 HOH AAA 4 604 132 HOH HOH . F 4 HOH AAA 5 605 84 HOH HOH . F 4 HOH AAA 6 606 90 HOH HOH . F 4 HOH AAA 7 607 108 HOH HOH . F 4 HOH AAA 8 608 32 HOH HOH . F 4 HOH AAA 9 609 104 HOH HOH . F 4 HOH AAA 10 610 4 HOH HOH . F 4 HOH AAA 11 611 150 HOH HOH . F 4 HOH AAA 12 612 65 HOH HOH . F 4 HOH AAA 13 613 177 HOH HOH . F 4 HOH AAA 14 614 8 HOH HOH . F 4 HOH AAA 15 615 112 HOH HOH . F 4 HOH AAA 16 616 18 HOH HOH . F 4 HOH AAA 17 617 20 HOH HOH . F 4 HOH AAA 18 618 34 HOH HOH . F 4 HOH AAA 19 619 189 HOH HOH . F 4 HOH AAA 20 620 131 HOH HOH . F 4 HOH AAA 21 621 66 HOH HOH . F 4 HOH AAA 22 622 114 HOH HOH . F 4 HOH AAA 23 623 71 HOH HOH . F 4 HOH AAA 24 624 151 HOH HOH . F 4 HOH AAA 25 625 50 HOH HOH . F 4 HOH AAA 26 626 58 HOH HOH . F 4 HOH AAA 27 627 133 HOH HOH . F 4 HOH AAA 28 628 62 HOH HOH . F 4 HOH AAA 29 629 60 HOH HOH . F 4 HOH AAA 30 630 164 HOH HOH . F 4 HOH AAA 31 631 6 HOH HOH . F 4 HOH AAA 32 632 37 HOH HOH . F 4 HOH AAA 33 633 171 HOH HOH . F 4 HOH AAA 34 634 109 HOH HOH . F 4 HOH AAA 35 635 64 HOH HOH . F 4 HOH AAA 36 636 138 HOH HOH . F 4 HOH AAA 37 637 7 HOH HOH . F 4 HOH AAA 38 638 111 HOH HOH . F 4 HOH AAA 39 639 10 HOH HOH . F 4 HOH AAA 40 640 42 HOH HOH . F 4 HOH AAA 41 641 93 HOH HOH . F 4 HOH AAA 42 642 61 HOH HOH . F 4 HOH AAA 43 643 13 HOH HOH . F 4 HOH AAA 44 644 56 HOH HOH . F 4 HOH AAA 45 645 5 HOH HOH . F 4 HOH AAA 46 646 83 HOH HOH . F 4 HOH AAA 47 647 26 HOH HOH . F 4 HOH AAA 48 648 95 HOH HOH . F 4 HOH AAA 49 649 94 HOH HOH . F 4 HOH AAA 50 650 12 HOH HOH . F 4 HOH AAA 51 651 184 HOH HOH . F 4 HOH AAA 52 652 23 HOH HOH . F 4 HOH AAA 53 653 9 HOH HOH . F 4 HOH AAA 54 654 74 HOH HOH . F 4 HOH AAA 55 655 78 HOH HOH . F 4 HOH AAA 56 656 142 HOH HOH . F 4 HOH AAA 57 657 47 HOH HOH . F 4 HOH AAA 58 658 193 HOH HOH . F 4 HOH AAA 59 659 52 HOH HOH . F 4 HOH AAA 60 660 126 HOH HOH . F 4 HOH AAA 61 661 98 HOH HOH . F 4 HOH AAA 62 662 148 HOH HOH . F 4 HOH AAA 63 663 24 HOH HOH . F 4 HOH AAA 64 664 48 HOH HOH . F 4 HOH AAA 65 665 59 HOH HOH . F 4 HOH AAA 66 666 160 HOH HOH . F 4 HOH AAA 67 667 2 HOH HOH . F 4 HOH AAA 68 668 69 HOH HOH . F 4 HOH AAA 69 669 156 HOH HOH . F 4 HOH AAA 70 670 185 HOH HOH . F 4 HOH AAA 71 671 39 HOH HOH . F 4 HOH AAA 72 672 17 HOH HOH . F 4 HOH AAA 73 673 154 HOH HOH . F 4 HOH AAA 74 674 16 HOH HOH . F 4 HOH AAA 75 675 21 HOH HOH . F 4 HOH AAA 76 676 92 HOH HOH . F 4 HOH AAA 77 677 15 HOH HOH . F 4 HOH AAA 78 678 35 HOH HOH . F 4 HOH AAA 79 679 27 HOH HOH . F 4 HOH AAA 80 680 70 HOH HOH . F 4 HOH AAA 81 681 25 HOH HOH . F 4 HOH AAA 82 682 14 HOH HOH . F 4 HOH AAA 83 683 182 HOH HOH . F 4 HOH AAA 84 684 85 HOH HOH . F 4 HOH AAA 85 685 3 HOH HOH . F 4 HOH AAA 86 686 38 HOH HOH . F 4 HOH AAA 87 687 67 HOH HOH . F 4 HOH AAA 88 688 22 HOH HOH . F 4 HOH AAA 89 689 44 HOH HOH . F 4 HOH AAA 90 690 124 HOH HOH . F 4 HOH AAA 91 691 81 HOH HOH . F 4 HOH AAA 92 692 51 HOH HOH . F 4 HOH AAA 93 693 161 HOH HOH . F 4 HOH AAA 94 694 11 HOH HOH . F 4 HOH AAA 95 695 29 HOH HOH . F 4 HOH AAA 96 696 1 HOH HOH . F 4 HOH AAA 97 697 123 HOH HOH . F 4 HOH AAA 98 698 30 HOH HOH . F 4 HOH AAA 99 699 190 HOH HOH . F 4 HOH AAA 100 700 87 HOH HOH . F 4 HOH AAA 101 701 103 HOH HOH . F 4 HOH AAA 102 702 41 HOH HOH . F 4 HOH AAA 103 703 115 HOH HOH . F 4 HOH AAA 104 704 134 HOH HOH . F 4 HOH AAA 105 705 31 HOH HOH . F 4 HOH AAA 106 706 40 HOH HOH . F 4 HOH AAA 107 707 72 HOH HOH . F 4 HOH AAA 108 708 49 HOH HOH . F 4 HOH AAA 109 709 75 HOH HOH . F 4 HOH AAA 110 710 186 HOH HOH . F 4 HOH AAA 111 711 36 HOH HOH . F 4 HOH AAA 112 712 129 HOH HOH . F 4 HOH AAA 113 713 168 HOH HOH . F 4 HOH AAA 114 714 99 HOH HOH . F 4 HOH AAA 115 715 179 HOH HOH . F 4 HOH AAA 116 716 173 HOH HOH . F 4 HOH AAA 117 717 196 HOH HOH . F 4 HOH AAA 118 718 55 HOH HOH . F 4 HOH AAA 119 719 128 HOH HOH . F 4 HOH AAA 120 720 91 HOH HOH . F 4 HOH AAA 121 721 183 HOH HOH . F 4 HOH AAA 122 722 102 HOH HOH . F 4 HOH AAA 123 723 187 HOH HOH . F 4 HOH AAA 124 724 130 HOH HOH . F 4 HOH AAA 125 725 145 HOH HOH . F 4 HOH AAA 126 726 118 HOH HOH . F 4 HOH AAA 127 727 192 HOH HOH . F 4 HOH AAA 128 728 163 HOH HOH . F 4 HOH AAA 129 729 135 HOH HOH . F 4 HOH AAA 130 730 19 HOH HOH . F 4 HOH AAA 131 731 172 HOH HOH . F 4 HOH AAA 132 732 125 HOH HOH . F 4 HOH AAA 133 733 117 HOH HOH . F 4 HOH AAA 134 734 152 HOH HOH . F 4 HOH AAA 135 735 166 HOH HOH . F 4 HOH AAA 136 736 127 HOH HOH . F 4 HOH AAA 137 737 174 HOH HOH . F 4 HOH AAA 138 738 121 HOH HOH . F 4 HOH AAA 139 739 162 HOH HOH . F 4 HOH AAA 140 740 181 HOH HOH . F 4 HOH AAA 141 741 178 HOH HOH . F 4 HOH AAA 142 742 169 HOH HOH . F 4 HOH AAA 143 743 54 HOH HOH . F 4 HOH AAA 144 744 158 HOH HOH . F 4 HOH AAA 145 745 46 HOH HOH . F 4 HOH AAA 146 746 57 HOH HOH . F 4 HOH AAA 147 747 77 HOH HOH . F 4 HOH AAA 148 748 110 HOH HOH . F 4 HOH AAA 149 749 180 HOH HOH . F 4 HOH AAA 150 750 53 HOH HOH . F 4 HOH AAA 151 751 176 HOH HOH . F 4 HOH AAA 152 752 82 HOH HOH . F 4 HOH AAA 153 753 45 HOH HOH . F 4 HOH AAA 154 754 136 HOH HOH . F 4 HOH AAA 155 755 175 HOH HOH . F 4 HOH AAA 156 756 86 HOH HOH . F 4 HOH AAA 157 757 143 HOH HOH . F 4 HOH AAA 158 758 191 HOH HOH . F 4 HOH AAA 159 759 33 HOH HOH . F 4 HOH AAA 160 760 146 HOH HOH . F 4 HOH AAA 161 761 101 HOH HOH . F 4 HOH AAA 162 762 119 HOH HOH . F 4 HOH AAA 163 763 153 HOH HOH . F 4 HOH AAA 164 764 188 HOH HOH . F 4 HOH AAA 165 765 105 HOH HOH . F 4 HOH AAA 166 766 167 HOH HOH . F 4 HOH AAA 167 767 120 HOH HOH . F 4 HOH AAA 168 768 141 HOH HOH . F 4 HOH AAA 169 769 76 HOH HOH . F 4 HOH AAA 170 770 63 HOH HOH . F 4 HOH AAA 171 771 96 HOH HOH . F 4 HOH AAA 172 772 144 HOH HOH . F 4 HOH AAA 173 773 155 HOH HOH . F 4 HOH AAA 174 774 157 HOH HOH . F 4 HOH AAA 175 775 106 HOH HOH . F 4 HOH AAA 176 776 140 HOH HOH . F 4 HOH AAA 177 777 107 HOH HOH . F 4 HOH AAA 178 778 79 HOH HOH . F 4 HOH AAA 179 779 100 HOH HOH . F 4 HOH AAA 180 780 122 HOH HOH . F 4 HOH AAA 181 781 147 HOH HOH . F 4 HOH AAA 182 782 73 HOH HOH . F 4 HOH AAA 183 783 159 HOH HOH . F 4 HOH AAA 184 784 113 HOH HOH . F 4 HOH AAA 185 785 149 HOH HOH . F 4 HOH AAA 186 786 139 HOH HOH . F 4 HOH AAA 187 787 165 HOH HOH . F 4 HOH AAA 188 788 137 HOH HOH . F 4 HOH AAA 189 789 97 HOH HOH . F 4 HOH AAA 190 790 195 HOH HOH . F 4 HOH AAA 191 791 116 HOH HOH . F 4 HOH AAA 192 792 170 HOH HOH . F 4 HOH AAA 193 793 194 HOH HOH . F 4 HOH AAA 194 794 68 HOH HOH . F 4 HOH AAA 195 795 89 HOH HOH . F 4 HOH AAA 196 796 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 ULK . . . E 3 40.234 18.578 11.337 1 18.18 ? C13 ULK 504 AAA 1 HETATM 2 C C15 ULK . . . E 3 40.125 18.497 13.743 1 20.25 ? C15 ULK 504 AAA 1 HETATM 3 C C17 ULK . . . E 3 39.091 16.78 12.454 1 18.79 ? C17 ULK 504 AAA 1 HETATM 4 C C22 ULK . . . E 3 47.608 16.459 10.114 1 17.77 ? C22 ULK 504 AAA 1 HETATM 5 C C24 ULK . . . E 3 48.507 15.313 9.733 1 18.18 ? C24 ULK 504 AAA 1 HETATM 6 C C01 ULK . . . E 3 39.95 15.091 5.434 1 16.32 ? C01 ULK 504 AAA 1 HETATM 7 N N02 ULK . . . E 3 40.573 15.946 6.43 1 16.04 ? N02 ULK 504 AAA 1 HETATM 8 C C03 ULK . . . E 3 41.834 15.769 6.83 1 16.4 ? C03 ULK 504 AAA 1 HETATM 9 O O04 ULK . . . E 3 42.552 14.86 6.411 1 16.05 ? O04 ULK 504 AAA 1 HETATM 10 C C05 ULK . . . E 3 42.313 16.708 7.908 1 16.29 ? C05 ULK 504 AAA 1 HETATM 11 C C06 ULK . . . E 3 43.647 16.675 8.299 1 16.3 ? C06 ULK 504 AAA 1 HETATM 12 C C07 ULK . . . E 3 44.054 17.532 9.32 1 16.77 ? C07 ULK 504 AAA 1 HETATM 13 C C08 ULK . . . E 3 43.121 18.379 9.904 1 16.7 ? C08 ULK 504 AAA 1 HETATM 14 C C09 ULK . . . E 3 41.809 18.36 9.446 1 16.93 ? C09 ULK 504 AAA 1 HETATM 15 N N10 ULK . . . E 3 41.404 17.516 8.479 1 16.39 ? N10 ULK 504 AAA 1 HETATM 16 C C11 ULK . . . E 3 40.727 19.219 10.06 1 17.91 ? C11 ULK 504 AAA 1 HETATM 17 O O12 ULK . . . E 3 39.672 19.428 9.121 1 18.15 ? O12 ULK 504 AAA 1 HETATM 18 C C14 ULK . . . E 3 40.557 19.11 12.579 1 19.9 ? C14 ULK 504 AAA 1 HETATM 19 C C16 ULK . . . E 3 39.399 17.326 13.682 1 18.9 ? C16 ULK 504 AAA 1 HETATM 20 C C18 ULK . . . E 3 39.515 17.394 11.29 1 18.2 ? C18 ULK 504 AAA 1 HETATM 21 C C19 ULK . . . E 3 45.455 17.607 9.842 1 17.97 ? C19 ULK 504 AAA 1 HETATM 22 O O20 ULK . . . E 3 45.85 18.599 10.453 1 19.4 ? O20 ULK 504 AAA 1 HETATM 23 N N21 ULK . . . E 3 46.232 16.534 9.646 1 17.69 ? N21 ULK 504 AAA 1 HETATM 24 C C23 ULK . . . E 3 47.956 15.43 11.126 1 18.29 ? C23 ULK 504 AAA 1 HETATM 25 C C25 ULK . . . E 3 49.988 15.577 9.475 1 17.91 ? C25 ULK 504 AAA 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #