data_7NQ2 # _model_server_result.job_id wdtKv6KK0IbELN1hfCR_Cw _model_server_result.datetime_utc '2024-11-05 14:02:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7NQ2 # _exptl.entry_id 7NQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NQ2 _cell.length_a 71.889 _cell.length_b 52.382 _cell.length_c 32.114 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7NQ2 _atom_sites.fract_transf_matrix[1][1] 0.01391 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ULE AAA 1 501 4000 ULE LIG . C 3 EDO AAA 1 502 1 EDO EDO . D 3 EDO AAA 1 503 2 EDO EDO . E 4 HOH AAA 1 601 140 HOH HOH . E 4 HOH AAA 2 602 117 HOH HOH . E 4 HOH AAA 3 603 118 HOH HOH . E 4 HOH AAA 4 604 84 HOH HOH . E 4 HOH AAA 5 605 145 HOH HOH . E 4 HOH AAA 6 606 126 HOH HOH . E 4 HOH AAA 7 607 142 HOH HOH . E 4 HOH AAA 8 608 65 HOH HOH . E 4 HOH AAA 9 609 136 HOH HOH . E 4 HOH AAA 10 610 74 HOH HOH . E 4 HOH AAA 11 611 122 HOH HOH . E 4 HOH AAA 12 612 50 HOH HOH . E 4 HOH AAA 13 613 76 HOH HOH . E 4 HOH AAA 14 614 21 HOH HOH . E 4 HOH AAA 15 615 2 HOH HOH . E 4 HOH AAA 16 616 123 HOH HOH . E 4 HOH AAA 17 617 124 HOH HOH . E 4 HOH AAA 18 618 37 HOH HOH . E 4 HOH AAA 19 619 80 HOH HOH . E 4 HOH AAA 20 620 54 HOH HOH . E 4 HOH AAA 21 621 18 HOH HOH . E 4 HOH AAA 22 622 12 HOH HOH . E 4 HOH AAA 23 623 57 HOH HOH . E 4 HOH AAA 24 624 93 HOH HOH . E 4 HOH AAA 25 625 78 HOH HOH . E 4 HOH AAA 26 626 20 HOH HOH . E 4 HOH AAA 27 627 59 HOH HOH . E 4 HOH AAA 28 628 30 HOH HOH . E 4 HOH AAA 29 629 139 HOH HOH . E 4 HOH AAA 30 630 106 HOH HOH . E 4 HOH AAA 31 631 40 HOH HOH . E 4 HOH AAA 32 632 135 HOH HOH . E 4 HOH AAA 33 633 4 HOH HOH . E 4 HOH AAA 34 634 44 HOH HOH . E 4 HOH AAA 35 635 121 HOH HOH . E 4 HOH AAA 36 636 22 HOH HOH . E 4 HOH AAA 37 637 38 HOH HOH . E 4 HOH AAA 38 638 1 HOH HOH . E 4 HOH AAA 39 639 60 HOH HOH . E 4 HOH AAA 40 640 66 HOH HOH . E 4 HOH AAA 41 641 61 HOH HOH . E 4 HOH AAA 42 642 120 HOH HOH . E 4 HOH AAA 43 643 72 HOH HOH . E 4 HOH AAA 44 644 82 HOH HOH . E 4 HOH AAA 45 645 116 HOH HOH . E 4 HOH AAA 46 646 8 HOH HOH . E 4 HOH AAA 47 647 25 HOH HOH . E 4 HOH AAA 48 648 19 HOH HOH . E 4 HOH AAA 49 649 31 HOH HOH . E 4 HOH AAA 50 650 92 HOH HOH . E 4 HOH AAA 51 651 9 HOH HOH . E 4 HOH AAA 52 652 7 HOH HOH . E 4 HOH AAA 53 653 46 HOH HOH . E 4 HOH AAA 54 654 109 HOH HOH . E 4 HOH AAA 55 655 15 HOH HOH . E 4 HOH AAA 56 656 107 HOH HOH . E 4 HOH AAA 57 657 86 HOH HOH . E 4 HOH AAA 58 658 53 HOH HOH . E 4 HOH AAA 59 659 16 HOH HOH . E 4 HOH AAA 60 660 55 HOH HOH . E 4 HOH AAA 61 661 11 HOH HOH . E 4 HOH AAA 62 662 24 HOH HOH . E 4 HOH AAA 63 663 13 HOH HOH . E 4 HOH AAA 64 664 26 HOH HOH . E 4 HOH AAA 65 665 29 HOH HOH . E 4 HOH AAA 66 666 3 HOH HOH . E 4 HOH AAA 67 667 28 HOH HOH . E 4 HOH AAA 68 668 81 HOH HOH . E 4 HOH AAA 69 669 47 HOH HOH . E 4 HOH AAA 70 670 114 HOH HOH . E 4 HOH AAA 71 671 52 HOH HOH . E 4 HOH AAA 72 672 32 HOH HOH . E 4 HOH AAA 73 673 119 HOH HOH . E 4 HOH AAA 74 674 14 HOH HOH . E 4 HOH AAA 75 675 113 HOH HOH . E 4 HOH AAA 76 676 111 HOH HOH . E 4 HOH AAA 77 677 6 HOH HOH . E 4 HOH AAA 78 678 75 HOH HOH . E 4 HOH AAA 79 679 143 HOH HOH . E 4 HOH AAA 80 680 10 HOH HOH . E 4 HOH AAA 81 681 87 HOH HOH . E 4 HOH AAA 82 682 45 HOH HOH . E 4 HOH AAA 83 683 79 HOH HOH . E 4 HOH AAA 84 684 67 HOH HOH . E 4 HOH AAA 85 685 41 HOH HOH . E 4 HOH AAA 86 686 132 HOH HOH . E 4 HOH AAA 87 687 17 HOH HOH . E 4 HOH AAA 88 688 5 HOH HOH . E 4 HOH AAA 89 689 39 HOH HOH . E 4 HOH AAA 90 690 23 HOH HOH . E 4 HOH AAA 91 691 73 HOH HOH . E 4 HOH AAA 92 692 130 HOH HOH . E 4 HOH AAA 93 693 36 HOH HOH . E 4 HOH AAA 94 694 147 HOH HOH . E 4 HOH AAA 95 695 125 HOH HOH . E 4 HOH AAA 96 696 68 HOH HOH . E 4 HOH AAA 97 697 146 HOH HOH . E 4 HOH AAA 98 698 91 HOH HOH . E 4 HOH AAA 99 699 34 HOH HOH . E 4 HOH AAA 100 700 131 HOH HOH . E 4 HOH AAA 101 701 64 HOH HOH . E 4 HOH AAA 102 702 137 HOH HOH . E 4 HOH AAA 103 703 51 HOH HOH . E 4 HOH AAA 104 704 48 HOH HOH . E 4 HOH AAA 105 705 69 HOH HOH . E 4 HOH AAA 106 706 27 HOH HOH . E 4 HOH AAA 107 707 42 HOH HOH . E 4 HOH AAA 108 708 134 HOH HOH . E 4 HOH AAA 109 709 148 HOH HOH . E 4 HOH AAA 110 710 35 HOH HOH . E 4 HOH AAA 111 711 98 HOH HOH . E 4 HOH AAA 112 712 101 HOH HOH . E 4 HOH AAA 113 713 127 HOH HOH . E 4 HOH AAA 114 714 43 HOH HOH . E 4 HOH AAA 115 715 133 HOH HOH . E 4 HOH AAA 116 716 138 HOH HOH . E 4 HOH AAA 117 717 108 HOH HOH . E 4 HOH AAA 118 718 128 HOH HOH . E 4 HOH AAA 119 719 62 HOH HOH . E 4 HOH AAA 120 720 129 HOH HOH . E 4 HOH AAA 121 721 97 HOH HOH . E 4 HOH AAA 122 722 100 HOH HOH . E 4 HOH AAA 123 723 96 HOH HOH . E 4 HOH AAA 124 724 58 HOH HOH . E 4 HOH AAA 125 725 83 HOH HOH . E 4 HOH AAA 126 726 110 HOH HOH . E 4 HOH AAA 127 727 103 HOH HOH . E 4 HOH AAA 128 728 105 HOH HOH . E 4 HOH AAA 129 729 88 HOH HOH . E 4 HOH AAA 130 730 141 HOH HOH . E 4 HOH AAA 131 731 63 HOH HOH . E 4 HOH AAA 132 732 85 HOH HOH . E 4 HOH AAA 133 733 102 HOH HOH . E 4 HOH AAA 134 734 104 HOH HOH . E 4 HOH AAA 135 735 71 HOH HOH . E 4 HOH AAA 136 736 70 HOH HOH . E 4 HOH AAA 137 737 90 HOH HOH . E 4 HOH AAA 138 738 49 HOH HOH . E 4 HOH AAA 139 739 33 HOH HOH . E 4 HOH AAA 140 740 99 HOH HOH . E 4 HOH AAA 141 741 95 HOH HOH . E 4 HOH AAA 142 742 89 HOH HOH . E 4 HOH AAA 143 743 115 HOH HOH . E 4 HOH AAA 144 744 77 HOH HOH . E 4 HOH AAA 145 745 144 HOH HOH . E 4 HOH AAA 146 746 112 HOH HOH . E 4 HOH AAA 147 747 56 HOH HOH . E 4 HOH AAA 148 748 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 35.275 10.471 -14.145 1 28.67 ? C1 EDO 503 AAA 1 HETATM 2 O O1 EDO . . . D 3 34.368 11.27 -13.401 1 29.94 ? O1 EDO 503 AAA 1 HETATM 3 C C2 EDO . . . D 3 35.256 10.75 -15.601 1 25.64 ? C2 EDO 503 AAA 1 HETATM 4 O O2 EDO . . . D 3 33.956 10.956 -16.11 1 23.81 ? O2 EDO 503 AAA 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #