data_7NQ8 # _model_server_result.job_id GHW0pM7Kl43VPoi4O3rGWQ _model_server_result.datetime_utc '2024-11-22 06:18:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7NQ8 # _exptl.entry_id 7NQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NQ8 _cell.length_a 71.706 _cell.length_b 52.549 _cell.length_c 32.032 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7NQ8 _atom_sites.fract_transf_matrix[1][1] 0.013946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 501 1 EDO EDO . C 2 EDO A 1 502 2 EDO EDO . D 2 EDO A 1 503 3 EDO EDO . E 3 UM5 A 1 504 1 UM5 LIG . F 4 HOH A 1 601 145 HOH HOH . F 4 HOH A 2 602 44 HOH HOH . F 4 HOH A 3 603 8 HOH HOH . F 4 HOH A 4 604 175 HOH HOH . F 4 HOH A 5 605 95 HOH HOH . F 4 HOH A 6 606 100 HOH HOH . F 4 HOH A 7 607 4 HOH HOH . F 4 HOH A 8 608 109 HOH HOH . F 4 HOH A 9 609 163 HOH HOH . F 4 HOH A 10 610 88 HOH HOH . F 4 HOH A 11 611 28 HOH HOH . F 4 HOH A 12 612 70 HOH HOH . F 4 HOH A 13 613 51 HOH HOH . F 4 HOH A 14 614 33 HOH HOH . F 4 HOH A 15 615 65 HOH HOH . F 4 HOH A 16 616 20 HOH HOH . F 4 HOH A 17 617 66 HOH HOH . F 4 HOH A 18 618 67 HOH HOH . F 4 HOH A 19 619 164 HOH HOH . F 4 HOH A 20 620 12 HOH HOH . F 4 HOH A 21 621 144 HOH HOH . F 4 HOH A 22 622 138 HOH HOH . F 4 HOH A 23 623 84 HOH HOH . F 4 HOH A 24 624 43 HOH HOH . F 4 HOH A 25 625 25 HOH HOH . F 4 HOH A 26 626 5 HOH HOH . F 4 HOH A 27 627 211 HOH HOH . F 4 HOH A 28 628 62 HOH HOH . F 4 HOH A 29 629 57 HOH HOH . F 4 HOH A 30 630 23 HOH HOH . F 4 HOH A 31 631 68 HOH HOH . F 4 HOH A 32 632 35 HOH HOH . F 4 HOH A 33 633 200 HOH HOH . F 4 HOH A 34 634 49 HOH HOH . F 4 HOH A 35 635 18 HOH HOH . F 4 HOH A 36 636 146 HOH HOH . F 4 HOH A 37 637 48 HOH HOH . F 4 HOH A 38 638 38 HOH HOH . F 4 HOH A 39 639 82 HOH HOH . F 4 HOH A 40 640 71 HOH HOH . F 4 HOH A 41 641 205 HOH HOH . F 4 HOH A 42 642 87 HOH HOH . F 4 HOH A 43 643 13 HOH HOH . F 4 HOH A 44 644 61 HOH HOH . F 4 HOH A 45 645 6 HOH HOH . F 4 HOH A 46 646 98 HOH HOH . F 4 HOH A 47 647 189 HOH HOH . F 4 HOH A 48 648 123 HOH HOH . F 4 HOH A 49 649 131 HOH HOH . F 4 HOH A 50 650 103 HOH HOH . F 4 HOH A 51 651 2 HOH HOH . F 4 HOH A 52 652 9 HOH HOH . F 4 HOH A 53 653 45 HOH HOH . F 4 HOH A 54 654 119 HOH HOH . F 4 HOH A 55 655 14 HOH HOH . F 4 HOH A 56 656 73 HOH HOH . F 4 HOH A 57 657 91 HOH HOH . F 4 HOH A 58 658 97 HOH HOH . F 4 HOH A 59 659 47 HOH HOH . F 4 HOH A 60 660 198 HOH HOH . F 4 HOH A 61 661 26 HOH HOH . F 4 HOH A 62 662 167 HOH HOH . F 4 HOH A 63 663 21 HOH HOH . F 4 HOH A 64 664 63 HOH HOH . F 4 HOH A 65 665 39 HOH HOH . F 4 HOH A 66 666 7 HOH HOH . F 4 HOH A 67 667 3 HOH HOH . F 4 HOH A 68 668 60 HOH HOH . F 4 HOH A 69 669 154 HOH HOH . F 4 HOH A 70 670 36 HOH HOH . F 4 HOH A 71 671 114 HOH HOH . F 4 HOH A 72 672 10 HOH HOH . F 4 HOH A 73 673 76 HOH HOH . F 4 HOH A 74 674 24 HOH HOH . F 4 HOH A 75 675 16 HOH HOH . F 4 HOH A 76 676 59 HOH HOH . F 4 HOH A 77 677 40 HOH HOH . F 4 HOH A 78 678 99 HOH HOH . F 4 HOH A 79 679 124 HOH HOH . F 4 HOH A 80 680 52 HOH HOH . F 4 HOH A 81 681 29 HOH HOH . F 4 HOH A 82 682 74 HOH HOH . F 4 HOH A 83 683 30 HOH HOH . F 4 HOH A 84 684 206 HOH HOH . F 4 HOH A 85 685 15 HOH HOH . F 4 HOH A 86 686 27 HOH HOH . F 4 HOH A 87 687 17 HOH HOH . F 4 HOH A 88 688 158 HOH HOH . F 4 HOH A 89 689 165 HOH HOH . F 4 HOH A 90 690 22 HOH HOH . F 4 HOH A 91 691 32 HOH HOH . F 4 HOH A 92 692 187 HOH HOH . F 4 HOH A 93 693 203 HOH HOH . F 4 HOH A 94 694 56 HOH HOH . F 4 HOH A 95 695 217 HOH HOH . F 4 HOH A 96 696 180 HOH HOH . F 4 HOH A 97 697 41 HOH HOH . F 4 HOH A 98 698 85 HOH HOH . F 4 HOH A 99 699 11 HOH HOH . F 4 HOH A 100 700 115 HOH HOH . F 4 HOH A 101 701 1 HOH HOH . F 4 HOH A 102 702 149 HOH HOH . F 4 HOH A 103 703 213 HOH HOH . F 4 HOH A 104 704 153 HOH HOH . F 4 HOH A 105 705 214 HOH HOH . F 4 HOH A 106 706 141 HOH HOH . F 4 HOH A 107 707 142 HOH HOH . F 4 HOH A 108 708 179 HOH HOH . F 4 HOH A 109 709 53 HOH HOH . F 4 HOH A 110 710 197 HOH HOH . F 4 HOH A 111 711 42 HOH HOH . F 4 HOH A 112 712 77 HOH HOH . F 4 HOH A 113 713 166 HOH HOH . F 4 HOH A 114 714 50 HOH HOH . F 4 HOH A 115 715 31 HOH HOH . F 4 HOH A 116 716 80 HOH HOH . F 4 HOH A 117 717 215 HOH HOH . F 4 HOH A 118 718 128 HOH HOH . F 4 HOH A 119 719 19 HOH HOH . F 4 HOH A 120 720 192 HOH HOH . F 4 HOH A 121 721 186 HOH HOH . F 4 HOH A 122 722 108 HOH HOH . F 4 HOH A 123 723 116 HOH HOH . F 4 HOH A 124 724 37 HOH HOH . F 4 HOH A 125 725 129 HOH HOH . F 4 HOH A 126 726 104 HOH HOH . F 4 HOH A 127 727 176 HOH HOH . F 4 HOH A 128 728 178 HOH HOH . F 4 HOH A 129 729 89 HOH HOH . F 4 HOH A 130 730 96 HOH HOH . F 4 HOH A 131 731 143 HOH HOH . F 4 HOH A 132 732 190 HOH HOH . F 4 HOH A 133 733 78 HOH HOH . F 4 HOH A 134 734 191 HOH HOH . F 4 HOH A 135 735 118 HOH HOH . F 4 HOH A 136 736 107 HOH HOH . F 4 HOH A 137 737 195 HOH HOH . F 4 HOH A 138 738 55 HOH HOH . F 4 HOH A 139 739 201 HOH HOH . F 4 HOH A 140 740 193 HOH HOH . F 4 HOH A 141 741 210 HOH HOH . F 4 HOH A 142 742 136 HOH HOH . F 4 HOH A 143 743 81 HOH HOH . F 4 HOH A 144 744 159 HOH HOH . F 4 HOH A 145 745 139 HOH HOH . F 4 HOH A 146 746 140 HOH HOH . F 4 HOH A 147 747 86 HOH HOH . F 4 HOH A 148 748 54 HOH HOH . F 4 HOH A 149 749 157 HOH HOH . F 4 HOH A 150 750 202 HOH HOH . F 4 HOH A 151 751 58 HOH HOH . F 4 HOH A 152 752 122 HOH HOH . F 4 HOH A 153 753 34 HOH HOH . F 4 HOH A 154 754 199 HOH HOH . F 4 HOH A 155 755 155 HOH HOH . F 4 HOH A 156 756 151 HOH HOH . F 4 HOH A 157 757 46 HOH HOH . F 4 HOH A 158 758 130 HOH HOH . F 4 HOH A 159 759 174 HOH HOH . F 4 HOH A 160 760 106 HOH HOH . F 4 HOH A 161 761 79 HOH HOH . F 4 HOH A 162 762 212 HOH HOH . F 4 HOH A 163 763 160 HOH HOH . F 4 HOH A 164 764 171 HOH HOH . F 4 HOH A 165 765 90 HOH HOH . F 4 HOH A 166 766 72 HOH HOH . F 4 HOH A 167 767 110 HOH HOH . F 4 HOH A 168 768 209 HOH HOH . F 4 HOH A 169 769 64 HOH HOH . F 4 HOH A 170 770 207 HOH HOH . F 4 HOH A 171 771 94 HOH HOH . F 4 HOH A 172 772 169 HOH HOH . F 4 HOH A 173 773 112 HOH HOH . F 4 HOH A 174 774 152 HOH HOH . F 4 HOH A 175 775 111 HOH HOH . F 4 HOH A 176 776 156 HOH HOH . F 4 HOH A 177 777 196 HOH HOH . F 4 HOH A 178 778 101 HOH HOH . F 4 HOH A 179 779 173 HOH HOH . F 4 HOH A 180 780 177 HOH HOH . F 4 HOH A 181 781 83 HOH HOH . F 4 HOH A 182 782 127 HOH HOH . F 4 HOH A 183 783 182 HOH HOH . F 4 HOH A 184 784 133 HOH HOH . F 4 HOH A 185 785 121 HOH HOH . F 4 HOH A 186 786 105 HOH HOH . F 4 HOH A 187 787 120 HOH HOH . F 4 HOH A 188 788 161 HOH HOH . F 4 HOH A 189 789 170 HOH HOH . F 4 HOH A 190 790 113 HOH HOH . F 4 HOH A 191 791 185 HOH HOH . F 4 HOH A 192 792 208 HOH HOH . F 4 HOH A 193 793 184 HOH HOH . F 4 HOH A 194 794 117 HOH HOH . F 4 HOH A 195 795 126 HOH HOH . F 4 HOH A 196 796 183 HOH HOH . F 4 HOH A 197 797 102 HOH HOH . F 4 HOH A 198 798 147 HOH HOH . F 4 HOH A 199 799 194 HOH HOH . F 4 HOH A 200 800 135 HOH HOH . F 4 HOH A 201 801 132 HOH HOH . F 4 HOH A 202 802 188 HOH HOH . F 4 HOH A 203 803 125 HOH HOH . F 4 HOH A 204 804 148 HOH HOH . F 4 HOH A 205 805 137 HOH HOH . F 4 HOH A 206 806 75 HOH HOH . F 4 HOH A 207 807 150 HOH HOH . F 4 HOH A 208 808 162 HOH HOH . F 4 HOH A 209 809 69 HOH HOH . F 4 HOH A 210 810 134 HOH HOH . F 4 HOH A 211 811 93 HOH HOH . F 4 HOH A 212 812 204 HOH HOH . F 4 HOH A 213 813 172 HOH HOH . F 4 HOH A 214 814 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 50.386 8.692 7.94 1 41.42 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 2 51.664 9.287 7.878 1 41.38 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 2 50.399 7.25 7.552 1 41.52 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 2 50.599 6.384 8.652 1 41.67 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #