data_7NQJ # _model_server_result.job_id NF8x90IwFjpmT9X10n4i9Q _model_server_result.datetime_utc '2024-11-08 20:52:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nqj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7NQJ # _exptl.entry_id 7NQJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NQJ _cell.length_a 71.725 _cell.length_b 52.153 _cell.length_c 32.013 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NQJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7NQJ _atom_sites.fract_transf_matrix[1][1] 0.013942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UME A 1 501 4000 UME LIG . C 3 EDO A 1 502 1 EDO EDO . D 3 EDO A 1 503 2 EDO EDO . E 3 EDO A 1 504 3 EDO EDO . F 4 PEG A 1 505 1 PEG PEG . G 5 HOH A 1 601 71 HOH HOH . G 5 HOH A 2 602 52 HOH HOH . G 5 HOH A 3 603 90 HOH HOH . G 5 HOH A 4 604 94 HOH HOH . G 5 HOH A 5 605 108 HOH HOH . G 5 HOH A 6 606 91 HOH HOH . G 5 HOH A 7 607 10 HOH HOH . G 5 HOH A 8 608 83 HOH HOH . G 5 HOH A 9 609 103 HOH HOH . G 5 HOH A 10 610 1 HOH HOH . G 5 HOH A 11 611 107 HOH HOH . G 5 HOH A 12 612 121 HOH HOH . G 5 HOH A 13 613 25 HOH HOH . G 5 HOH A 14 614 45 HOH HOH . G 5 HOH A 15 615 88 HOH HOH . G 5 HOH A 16 616 38 HOH HOH . G 5 HOH A 17 617 12 HOH HOH . G 5 HOH A 18 618 39 HOH HOH . G 5 HOH A 19 619 7 HOH HOH . G 5 HOH A 20 620 19 HOH HOH . G 5 HOH A 21 621 24 HOH HOH . G 5 HOH A 22 622 95 HOH HOH . G 5 HOH A 23 623 64 HOH HOH . G 5 HOH A 24 624 61 HOH HOH . G 5 HOH A 25 625 98 HOH HOH . G 5 HOH A 26 626 5 HOH HOH . G 5 HOH A 27 627 17 HOH HOH . G 5 HOH A 28 628 92 HOH HOH . G 5 HOH A 29 629 43 HOH HOH . G 5 HOH A 30 630 22 HOH HOH . G 5 HOH A 31 631 40 HOH HOH . G 5 HOH A 32 632 26 HOH HOH . G 5 HOH A 33 633 50 HOH HOH . G 5 HOH A 34 634 36 HOH HOH . G 5 HOH A 35 635 33 HOH HOH . G 5 HOH A 36 636 16 HOH HOH . G 5 HOH A 37 637 89 HOH HOH . G 5 HOH A 38 638 93 HOH HOH . G 5 HOH A 39 639 27 HOH HOH . G 5 HOH A 40 640 23 HOH HOH . G 5 HOH A 41 641 62 HOH HOH . G 5 HOH A 42 642 9 HOH HOH . G 5 HOH A 43 643 49 HOH HOH . G 5 HOH A 44 644 15 HOH HOH . G 5 HOH A 45 645 8 HOH HOH . G 5 HOH A 46 646 56 HOH HOH . G 5 HOH A 47 647 86 HOH HOH . G 5 HOH A 48 648 2 HOH HOH . G 5 HOH A 49 649 51 HOH HOH . G 5 HOH A 50 650 72 HOH HOH . G 5 HOH A 51 651 6 HOH HOH . G 5 HOH A 52 652 3 HOH HOH . G 5 HOH A 53 653 20 HOH HOH . G 5 HOH A 54 654 80 HOH HOH . G 5 HOH A 55 655 74 HOH HOH . G 5 HOH A 56 656 13 HOH HOH . G 5 HOH A 57 657 32 HOH HOH . G 5 HOH A 58 658 14 HOH HOH . G 5 HOH A 59 659 41 HOH HOH . G 5 HOH A 60 660 60 HOH HOH . G 5 HOH A 61 661 59 HOH HOH . G 5 HOH A 62 662 67 HOH HOH . G 5 HOH A 63 663 11 HOH HOH . G 5 HOH A 64 664 73 HOH HOH . G 5 HOH A 65 665 104 HOH HOH . G 5 HOH A 66 666 31 HOH HOH . G 5 HOH A 67 667 77 HOH HOH . G 5 HOH A 68 668 114 HOH HOH . G 5 HOH A 69 669 119 HOH HOH . G 5 HOH A 70 670 4 HOH HOH . G 5 HOH A 71 671 101 HOH HOH . G 5 HOH A 72 672 46 HOH HOH . G 5 HOH A 73 673 30 HOH HOH . G 5 HOH A 74 674 102 HOH HOH . G 5 HOH A 75 675 54 HOH HOH . G 5 HOH A 76 676 63 HOH HOH . G 5 HOH A 77 677 35 HOH HOH . G 5 HOH A 78 678 111 HOH HOH . G 5 HOH A 79 679 18 HOH HOH . G 5 HOH A 80 680 21 HOH HOH . G 5 HOH A 81 681 47 HOH HOH . G 5 HOH A 82 682 34 HOH HOH . G 5 HOH A 83 683 70 HOH HOH . G 5 HOH A 84 684 100 HOH HOH . G 5 HOH A 85 685 28 HOH HOH . G 5 HOH A 86 686 81 HOH HOH . G 5 HOH A 87 687 110 HOH HOH . G 5 HOH A 88 688 37 HOH HOH . G 5 HOH A 89 689 78 HOH HOH . G 5 HOH A 90 690 48 HOH HOH . G 5 HOH A 91 691 96 HOH HOH . G 5 HOH A 92 692 68 HOH HOH . G 5 HOH A 93 693 105 HOH HOH . G 5 HOH A 94 694 66 HOH HOH . G 5 HOH A 95 695 120 HOH HOH . G 5 HOH A 96 696 97 HOH HOH . G 5 HOH A 97 697 116 HOH HOH . G 5 HOH A 98 698 99 HOH HOH . G 5 HOH A 99 699 87 HOH HOH . G 5 HOH A 100 700 115 HOH HOH . G 5 HOH A 101 701 82 HOH HOH . G 5 HOH A 102 702 106 HOH HOH . G 5 HOH A 103 703 75 HOH HOH . G 5 HOH A 104 704 55 HOH HOH . G 5 HOH A 105 705 84 HOH HOH . G 5 HOH A 106 706 42 HOH HOH . G 5 HOH A 107 707 44 HOH HOH . G 5 HOH A 108 708 29 HOH HOH . G 5 HOH A 109 709 109 HOH HOH . G 5 HOH A 110 710 58 HOH HOH . G 5 HOH A 111 711 112 HOH HOH . G 5 HOH A 112 712 118 HOH HOH . G 5 HOH A 113 713 113 HOH HOH . G 5 HOH A 114 714 117 HOH HOH . G 5 HOH A 115 715 65 HOH HOH . G 5 HOH A 116 716 85 HOH HOH . G 5 HOH A 117 717 53 HOH HOH . G 5 HOH A 118 718 76 HOH HOH . G 5 HOH A 119 719 57 HOH HOH . G 5 HOH A 120 720 69 HOH HOH . G 5 HOH A 121 721 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 35.271 10.463 -14.249 1 30.75 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 3 34.4 11.25 -13.446 1 32.01 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 3 35.055 10.708 -15.708 1 28 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 3 33.694 10.967 -16.011 1 25.95 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #