data_7NT1 # _model_server_result.job_id 4OkHv1dXs55uZBROgX-vHA _model_server_result.datetime_utc '2024-11-16 02:46:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nt1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7NT1 # _exptl.entry_id 7NT1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NT1 _cell.length_a 68.175 _cell.length_b 102.171 _cell.length_c 104.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NT1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id UQW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id UQW _struct_conn.ptnr2_auth_seq_id 504 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.817 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7NT1 _atom_sites.fract_transf_matrix[1][1] 0.014668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00958 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 501 501 DMS DMS . D 2 DMS A 1 502 601 DMS DMS . E 2 DMS A 1 503 601 DMS DMS . F 2 DMS B 1 501 501 DMS DMS . G 2 DMS B 1 502 701 DMS DMS . H 2 DMS B 1 503 901 DMS DMS . I 3 UQW B 1 504 1001 UQW FS7 . J 4 HOH A 1 601 17 HOH HOH . J 4 HOH A 2 602 112 HOH HOH . J 4 HOH A 3 603 111 HOH HOH . J 4 HOH A 4 604 37 HOH HOH . J 4 HOH A 5 605 60 HOH HOH . J 4 HOH A 6 606 125 HOH HOH . J 4 HOH A 7 607 113 HOH HOH . J 4 HOH A 8 608 5 HOH HOH . J 4 HOH A 9 609 28 HOH HOH . J 4 HOH A 10 610 55 HOH HOH . J 4 HOH A 11 611 81 HOH HOH . J 4 HOH A 12 612 7 HOH HOH . J 4 HOH A 13 613 69 HOH HOH . J 4 HOH A 14 614 1 HOH HOH . J 4 HOH A 15 615 74 HOH HOH . J 4 HOH A 16 616 142 HOH HOH . J 4 HOH A 17 617 101 HOH HOH . J 4 HOH A 18 618 137 HOH HOH . K 4 HOH B 1 601 16 HOH HOH . K 4 HOH B 2 602 35 HOH HOH . K 4 HOH B 3 603 39 HOH HOH . K 4 HOH B 4 604 23 HOH HOH . K 4 HOH B 5 605 120 HOH HOH . K 4 HOH B 6 606 83 HOH HOH . K 4 HOH B 7 607 21 HOH HOH . K 4 HOH B 8 608 117 HOH HOH . K 4 HOH B 9 609 22 HOH HOH . K 4 HOH B 10 610 9 HOH HOH . K 4 HOH B 11 611 79 HOH HOH . K 4 HOH B 12 612 18 HOH HOH . K 4 HOH B 13 613 96 HOH HOH . K 4 HOH B 14 614 141 HOH HOH . K 4 HOH B 15 615 49 HOH HOH . K 4 HOH B 16 616 52 HOH HOH . K 4 HOH B 17 617 19 HOH HOH . K 4 HOH B 18 618 121 HOH HOH . K 4 HOH B 19 619 93 HOH HOH . K 4 HOH B 20 620 71 HOH HOH . K 4 HOH B 21 621 91 HOH HOH . K 4 HOH B 22 622 13 HOH HOH . K 4 HOH B 23 623 127 HOH HOH . K 4 HOH B 24 624 140 HOH HOH . K 4 HOH B 25 625 95 HOH HOH . K 4 HOH B 26 626 72 HOH HOH . K 4 HOH B 27 627 62 HOH HOH . K 4 HOH B 28 628 89 HOH HOH . K 4 HOH B 29 629 38 HOH HOH . K 4 HOH B 30 630 4 HOH HOH . K 4 HOH B 31 631 84 HOH HOH . K 4 HOH B 32 632 94 HOH HOH . K 4 HOH B 33 633 12 HOH HOH . K 4 HOH B 34 634 139 HOH HOH . K 4 HOH B 35 635 110 HOH HOH . K 4 HOH B 36 636 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 1.561 -29.492 10.681 1 163.43 ? S DMS 501 A 1 HETATM 2 O O DMS . . . C 2 0.146 -29.19 11.083 1 157.19 ? O DMS 501 A 1 HETATM 3 C C1 DMS . . . C 2 1.585 -29.547 8.905 1 145.68 ? C1 DMS 501 A 1 HETATM 4 C C2 DMS . . . C 2 1.79 -31.221 10.995 1 153.31 ? C2 DMS 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #