data_7NT1 # _model_server_result.job_id eOYgbyPvjFTd8yNrnfN16w _model_server_result.datetime_utc '2024-11-16 02:46:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nt1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":504}' # _entry.id 7NT1 # _exptl.entry_id 7NT1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.352 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2R)-1-[2-(1H-indol-3-yl)ethylamino]-1-oxidanylidene-butan-2-yl] prop-2-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NT1 _cell.length_a 68.175 _cell.length_b 102.171 _cell.length_c 104.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NT1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id UQW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id UQW _struct_conn.ptnr2_auth_seq_id 504 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.817 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C17 H20 N2 O3' _chem_comp.formula_weight 300.352 _chem_comp.id UQW _chem_comp.mon_nstd_flag . _chem_comp.name '[(2R)-1-[2-(1H-indol-3-yl)ethylamino]-1-oxidanylidene-butan-2-yl] prop-2-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[(2~{R})-1-[2-(1~{H}-indol-3-yl)ethylamino]-1-oxidanylidene-butan-2-yl] prop-2-enoate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C12 UQW sing 367 n y N2 C11 UQW sing 368 n y C17 C12 UQW doub 369 n y C17 C16 UQW sing 370 n y C12 C13 UQW sing 371 n y C11 C10 UQW doub 372 n y C16 C15 UQW doub 373 n y C13 C10 UQW sing 374 n y C13 C14 UQW doub 375 n y C10 C9 UQW sing 376 n n C15 C14 UQW sing 377 n y C8 C9 UQW sing 378 n n C8 N1 UQW sing 379 n n O2 C7 UQW doub 380 n n N1 C7 UQW sing 381 n n C7 C4 UQW sing 382 n n C6 C5 UQW sing 383 n n C4 C5 UQW sing 384 n n C4 O1 UQW sing 385 n n O1 C3 UQW sing 386 n n O3 C3 UQW doub 387 n n C3 C2 UQW sing 388 n n C2 C1 UQW doub 389 n n C14 H1 UQW sing 390 n n C17 H2 UQW sing 391 n n C1 H3 UQW sing 392 n n C1 H4 UQW sing 393 n n C2 H6 UQW sing 394 n n C4 H8 UQW sing 395 n n C5 H9 UQW sing 396 n n C5 H10 UQW sing 397 n n C6 H11 UQW sing 398 n n C6 H12 UQW sing 399 n n C6 H13 UQW sing 400 n n N1 H14 UQW sing 401 n n C8 H15 UQW sing 402 n n C8 H16 UQW sing 403 n n C9 H17 UQW sing 404 n n C9 H18 UQW sing 405 n n C11 H19 UQW sing 406 n n N2 H20 UQW sing 407 n n C15 H21 UQW sing 408 n n C16 H22 UQW sing 409 n n # _atom_sites.entry_id 7NT1 _atom_sites.fract_transf_matrix[1][1] 0.014668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00958 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS A 1 501 501 DMS DMS . D 2 DMS A 1 502 601 DMS DMS . E 2 DMS A 1 503 601 DMS DMS . F 2 DMS B 1 501 501 DMS DMS . G 2 DMS B 1 502 701 DMS DMS . H 2 DMS B 1 503 901 DMS DMS . I 3 UQW B 1 504 1001 UQW FS7 . J 4 HOH A 1 601 17 HOH HOH . J 4 HOH A 2 602 112 HOH HOH . J 4 HOH A 3 603 111 HOH HOH . J 4 HOH A 4 604 37 HOH HOH . J 4 HOH A 5 605 60 HOH HOH . J 4 HOH A 6 606 125 HOH HOH . J 4 HOH A 7 607 113 HOH HOH . J 4 HOH A 8 608 5 HOH HOH . J 4 HOH A 9 609 28 HOH HOH . J 4 HOH A 10 610 55 HOH HOH . J 4 HOH A 11 611 81 HOH HOH . J 4 HOH A 12 612 7 HOH HOH . J 4 HOH A 13 613 69 HOH HOH . J 4 HOH A 14 614 1 HOH HOH . J 4 HOH A 15 615 74 HOH HOH . J 4 HOH A 16 616 142 HOH HOH . J 4 HOH A 17 617 101 HOH HOH . J 4 HOH A 18 618 137 HOH HOH . K 4 HOH B 1 601 16 HOH HOH . K 4 HOH B 2 602 35 HOH HOH . K 4 HOH B 3 603 39 HOH HOH . K 4 HOH B 4 604 23 HOH HOH . K 4 HOH B 5 605 120 HOH HOH . K 4 HOH B 6 606 83 HOH HOH . K 4 HOH B 7 607 21 HOH HOH . K 4 HOH B 8 608 117 HOH HOH . K 4 HOH B 9 609 22 HOH HOH . K 4 HOH B 10 610 9 HOH HOH . K 4 HOH B 11 611 79 HOH HOH . K 4 HOH B 12 612 18 HOH HOH . K 4 HOH B 13 613 96 HOH HOH . K 4 HOH B 14 614 141 HOH HOH . K 4 HOH B 15 615 49 HOH HOH . K 4 HOH B 16 616 52 HOH HOH . K 4 HOH B 17 617 19 HOH HOH . K 4 HOH B 18 618 121 HOH HOH . K 4 HOH B 19 619 93 HOH HOH . K 4 HOH B 20 620 71 HOH HOH . K 4 HOH B 21 621 91 HOH HOH . K 4 HOH B 22 622 13 HOH HOH . K 4 HOH B 23 623 127 HOH HOH . K 4 HOH B 24 624 140 HOH HOH . K 4 HOH B 25 625 95 HOH HOH . K 4 HOH B 26 626 72 HOH HOH . K 4 HOH B 27 627 62 HOH HOH . K 4 HOH B 28 628 89 HOH HOH . K 4 HOH B 29 629 38 HOH HOH . K 4 HOH B 30 630 4 HOH HOH . K 4 HOH B 31 631 84 HOH HOH . K 4 HOH B 32 632 94 HOH HOH . K 4 HOH B 33 633 12 HOH HOH . K 4 HOH B 34 634 139 HOH HOH . K 4 HOH B 35 635 110 HOH HOH . K 4 HOH B 36 636 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 UQW . . . I 3 24.543 2.565 -30.875 1 116.07 ? C12 UQW 504 B 1 HETATM 2 C C13 UQW . . . I 3 24.229 3.044 -29.582 1 112.64 ? C13 UQW 504 B 1 HETATM 3 C C14 UQW . . . I 3 25.269 3.282 -28.672 1 115.65 ? C14 UQW 504 B 1 HETATM 4 C C17 UQW . . . I 3 25.855 2.322 -31.28 1 115.71 ? C17 UQW 504 B 1 HETATM 5 C C1 UQW . . . I 3 20.618 2.626 -23.955 1 76.25 ? C1 UQW 504 B 1 HETATM 6 C C2 UQW . . . I 3 20.039 3.846 -24.661 1 84.69 ? C2 UQW 504 B 1 HETATM 7 C C3 UQW . . . I 3 18.613 3.698 -25.166 1 98.73 ? C3 UQW 504 B 1 HETATM 8 O O1 UQW . . . I 3 17.994 4.848 -25.511 1 113.53 ? O1 UQW 504 B 1 HETATM 9 C C4 UQW . . . I 3 18.759 5.996 -25.973 1 117.13 ? C4 UQW 504 B 1 HETATM 10 C C5 UQW . . . I 3 17.822 7.189 -25.776 1 112.06 ? C5 UQW 504 B 1 HETATM 11 C C6 UQW . . . I 3 16.36 6.895 -26.035 1 105.75 ? C6 UQW 504 B 1 HETATM 12 C C7 UQW . . . I 3 19.261 5.827 -27.409 1 116.21 ? C7 UQW 504 B 1 HETATM 13 N N1 UQW . . . I 3 19.842 4.681 -27.732 1 116.18 ? N1 UQW 504 B 1 HETATM 14 C C8 UQW . . . I 3 20.857 4.576 -28.765 1 116.45 ? C8 UQW 504 B 1 HETATM 15 C C9 UQW . . . I 3 21.997 3.657 -28.356 1 115.29 ? C9 UQW 504 B 1 HETATM 16 C C10 UQW . . . I 3 22.799 3.174 -29.525 1 112.46 ? C10 UQW 504 B 1 HETATM 17 C C11 UQW . . . I 3 22.332 2.78 -30.746 1 114.52 ? C11 UQW 504 B 1 HETATM 18 N N2 UQW . . . I 3 23.368 2.414 -31.56 1 113.16 ? N2 UQW 504 B 1 HETATM 19 C C15 UQW . . . I 3 26.566 3.044 -29.073 1 123.8 ? C15 UQW 504 B 1 HETATM 20 C C16 UQW . . . I 3 26.85 2.573 -30.361 1 126.48 ? C16 UQW 504 B 1 HETATM 21 O O2 UQW . . . I 3 19.133 6.741 -28.221 1 115.91 ? O2 UQW 504 B 1 HETATM 22 O O3 UQW . . . I 3 18 2.67 -25.285 1 96.76 ? O3 UQW 504 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 422 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #