data_7NT2
#
_model_server_result.job_id            BL9I-Y0nwgrNgzFdo8k9eA 
_model_server_result.datetime_utc      '2024-11-16 00:22:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nt2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    7NT2 
#
_exptl.entry_id    7NT2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7NT2 
_cell.length_a            68.155 
_cell.length_b            100.588 
_cell.length_c            104.726 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NT2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 K N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             145 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              145 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            I 
_struct_conn.ptnr2_label_atom_id            C1 
_struct_conn.ptnr2_label_comp_id            URK 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             URK 
_struct_conn.ptnr2_auth_seq_id              604 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.809 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7NT2 
_atom_sites.fract_transf_matrix[1][1]    0.014672 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009942 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DMS A 1 601 601 DMS DMS . 
D 2 DMS A 1 602 701 DMS DMS . 
E 3 CL A 1 603 801 CL CL . 
F 2 DMS B 1 601 601 DMS DMS . 
G 2 DMS B 1 602 701 DMS DMS . 
H 2 DMS B 1 603 901 DMS DMS . 
I 4 URK B 1 604 1101 URK FS6 . 
J 5 PEG B 1 605 1201 PEG PEG . 
K 2 DMS B 1 606 1401 DMS DMS . 
L 6 HOH A 1 701 222 HOH HOH . 
L 6 HOH A 2 702 138 HOH HOH . 
L 6 HOH A 3 703 126 HOH HOH . 
L 6 HOH A 4 704 217 HOH HOH . 
L 6 HOH A 5 705 150 HOH HOH . 
L 6 HOH A 6 706 112 HOH HOH . 
L 6 HOH A 7 707 97 HOH HOH . 
L 6 HOH A 8 708 174 HOH HOH . 
L 6 HOH A 9 709 36 HOH HOH . 
L 6 HOH A 10 710 203 HOH HOH . 
L 6 HOH A 11 711 125 HOH HOH . 
L 6 HOH A 12 712 108 HOH HOH . 
L 6 HOH A 13 713 17 HOH HOH . 
L 6 HOH A 14 714 85 HOH HOH . 
L 6 HOH A 15 715 78 HOH HOH . 
L 6 HOH A 16 716 202 HOH HOH . 
L 6 HOH A 17 717 64 HOH HOH . 
L 6 HOH A 18 718 122 HOH HOH . 
L 6 HOH A 19 719 198 HOH HOH . 
L 6 HOH A 20 720 74 HOH HOH . 
L 6 HOH A 21 721 60 HOH HOH . 
L 6 HOH A 22 722 37 HOH HOH . 
L 6 HOH A 23 723 62 HOH HOH . 
L 6 HOH A 24 724 200 HOH HOH . 
L 6 HOH A 25 725 25 HOH HOH . 
L 6 HOH A 26 726 31 HOH HOH . 
L 6 HOH A 27 727 55 HOH HOH . 
L 6 HOH A 28 728 69 HOH HOH . 
L 6 HOH A 29 729 214 HOH HOH . 
L 6 HOH A 30 730 65 HOH HOH . 
L 6 HOH A 31 731 81 HOH HOH . 
L 6 HOH A 32 732 11 HOH HOH . 
L 6 HOH A 33 733 7 HOH HOH . 
L 6 HOH A 34 734 51 HOH HOH . 
L 6 HOH A 35 735 70 HOH HOH . 
L 6 HOH A 36 736 28 HOH HOH . 
L 6 HOH A 37 737 104 HOH HOH . 
L 6 HOH A 38 738 43 HOH HOH . 
L 6 HOH A 39 739 42 HOH HOH . 
L 6 HOH A 40 740 199 HOH HOH . 
L 6 HOH A 41 741 192 HOH HOH . 
L 6 HOH A 42 742 29 HOH HOH . 
L 6 HOH A 43 743 77 HOH HOH . 
L 6 HOH A 44 744 102 HOH HOH . 
L 6 HOH A 45 745 34 HOH HOH . 
L 6 HOH A 46 746 160 HOH HOH . 
L 6 HOH A 47 747 38 HOH HOH . 
L 6 HOH A 48 748 212 HOH HOH . 
L 6 HOH A 49 749 123 HOH HOH . 
L 6 HOH A 50 750 67 HOH HOH . 
L 6 HOH A 51 751 211 HOH HOH . 
L 6 HOH A 52 752 141 HOH HOH . 
L 6 HOH A 53 753 47 HOH HOH . 
L 6 HOH A 54 754 117 HOH HOH . 
L 6 HOH A 55 755 1 HOH HOH . 
L 6 HOH A 56 756 210 HOH HOH . 
L 6 HOH A 57 757 5 HOH HOH . 
L 6 HOH A 58 758 101 HOH HOH . 
L 6 HOH A 59 759 61 HOH HOH . 
L 6 HOH A 60 760 114 HOH HOH . 
L 6 HOH A 61 761 201 HOH HOH . 
L 6 HOH A 62 762 115 HOH HOH . 
L 6 HOH A 63 763 191 HOH HOH . 
L 6 HOH A 64 764 164 HOH HOH . 
L 6 HOH A 65 765 89 HOH HOH . 
L 6 HOH A 66 766 190 HOH HOH . 
L 6 HOH A 67 767 137 HOH HOH . 
L 6 HOH A 68 768 196 HOH HOH . 
M 6 HOH B 1 701 157 HOH HOH . 
M 6 HOH B 2 702 133 HOH HOH . 
M 6 HOH B 3 703 171 HOH HOH . 
M 6 HOH B 4 704 176 HOH HOH . 
M 6 HOH B 5 705 151 HOH HOH . 
M 6 HOH B 6 706 224 HOH HOH . 
M 6 HOH B 7 707 103 HOH HOH . 
M 6 HOH B 8 708 16 HOH HOH . 
M 6 HOH B 9 709 147 HOH HOH . 
M 6 HOH B 10 710 175 HOH HOH . 
M 6 HOH B 11 711 172 HOH HOH . 
M 6 HOH B 12 712 93 HOH HOH . 
M 6 HOH B 13 713 216 HOH HOH . 
M 6 HOH B 14 714 72 HOH HOH . 
M 6 HOH B 15 715 119 HOH HOH . 
M 6 HOH B 16 716 207 HOH HOH . 
M 6 HOH B 17 717 183 HOH HOH . 
M 6 HOH B 18 718 83 HOH HOH . 
M 6 HOH B 19 719 76 HOH HOH . 
M 6 HOH B 20 720 189 HOH HOH . 
M 6 HOH B 21 721 95 HOH HOH . 
M 6 HOH B 22 722 116 HOH HOH . 
M 6 HOH B 23 723 44 HOH HOH . 
M 6 HOH B 24 724 91 HOH HOH . 
M 6 HOH B 25 725 88 HOH HOH . 
M 6 HOH B 26 726 22 HOH HOH . 
M 6 HOH B 27 727 75 HOH HOH . 
M 6 HOH B 28 728 66 HOH HOH . 
M 6 HOH B 29 729 179 HOH HOH . 
M 6 HOH B 30 730 162 HOH HOH . 
M 6 HOH B 31 731 153 HOH HOH . 
M 6 HOH B 32 732 9 HOH HOH . 
M 6 HOH B 33 733 124 HOH HOH . 
M 6 HOH B 34 734 121 HOH HOH . 
M 6 HOH B 35 735 30 HOH HOH . 
M 6 HOH B 36 736 127 HOH HOH . 
M 6 HOH B 37 737 218 HOH HOH . 
M 6 HOH B 38 738 49 HOH HOH . 
M 6 HOH B 39 739 19 HOH HOH . 
M 6 HOH B 40 740 221 HOH HOH . 
M 6 HOH B 41 741 134 HOH HOH . 
M 6 HOH B 42 742 39 HOH HOH . 
M 6 HOH B 43 743 213 HOH HOH . 
M 6 HOH B 44 744 135 HOH HOH . 
M 6 HOH B 45 745 227 HOH HOH . 
M 6 HOH B 46 746 140 HOH HOH . 
M 6 HOH B 47 747 52 HOH HOH . 
M 6 HOH B 48 748 58 HOH HOH . 
M 6 HOH B 49 749 90 HOH HOH . 
M 6 HOH B 50 750 35 HOH HOH . 
M 6 HOH B 51 751 120 HOH HOH . 
M 6 HOH B 52 752 57 HOH HOH . 
M 6 HOH B 53 753 107 HOH HOH . 
M 6 HOH B 54 754 68 HOH HOH . 
M 6 HOH B 55 755 32 HOH HOH . 
M 6 HOH B 56 756 86 HOH HOH . 
M 6 HOH B 57 757 168 HOH HOH . 
M 6 HOH B 58 758 79 HOH HOH . 
M 6 HOH B 59 759 27 HOH HOH . 
M 6 HOH B 60 760 53 HOH HOH . 
M 6 HOH B 61 761 226 HOH HOH . 
M 6 HOH B 62 762 177 HOH HOH . 
M 6 HOH B 63 763 184 HOH HOH . 
M 6 HOH B 64 764 18 HOH HOH . 
M 6 HOH B 65 765 46 HOH HOH . 
M 6 HOH B 66 766 20 HOH HOH . 
M 6 HOH B 67 767 41 HOH HOH . 
M 6 HOH B 68 768 173 HOH HOH . 
M 6 HOH B 69 769 23 HOH HOH . 
M 6 HOH B 70 770 130 HOH HOH . 
M 6 HOH B 71 771 195 HOH HOH . 
M 6 HOH B 72 772 166 HOH HOH . 
M 6 HOH B 73 773 59 HOH HOH . 
M 6 HOH B 74 774 149 HOH HOH . 
M 6 HOH B 75 775 13 HOH HOH . 
M 6 HOH B 76 776 12 HOH HOH . 
M 6 HOH B 77 777 82 HOH HOH . 
M 6 HOH B 78 778 21 HOH HOH . 
M 6 HOH B 79 779 181 HOH HOH . 
M 6 HOH B 80 780 4 HOH HOH . 
M 6 HOH B 81 781 84 HOH HOH . 
M 6 HOH B 82 782 148 HOH HOH . 
M 6 HOH B 83 783 100 HOH HOH . 
M 6 HOH B 84 784 92 HOH HOH . 
M 6 HOH B 85 785 225 HOH HOH . 
M 6 HOH B 86 786 165 HOH HOH . 
M 6 HOH B 87 787 143 HOH HOH . 
M 6 HOH B 88 788 132 HOH HOH . 
M 6 HOH B 89 789 118 HOH HOH . 
M 6 HOH B 90 790 145 HOH HOH . 
M 6 HOH B 91 791 110 HOH HOH . 
M 6 HOH B 92 792 180 HOH HOH . 
M 6 HOH B 93 793 146 HOH HOH . 
M 6 HOH B 94 794 142 HOH HOH . 
M 6 HOH B 95 795 109 HOH HOH . 
M 6 HOH B 96 796 50 HOH HOH . 
M 6 HOH B 97 797 186 HOH HOH . 
M 6 HOH B 98 798 131 HOH HOH . 
M 6 HOH B 99 799 220 HOH HOH . 
M 6 HOH B 100 800 219 HOH HOH . 
M 6 HOH B 101 801 197 HOH HOH . 
M 6 HOH B 102 802 223 HOH HOH . 
M 6 HOH B 103 803 194 HOH HOH . 
M 6 HOH B 104 804 161 HOH HOH . 
M 6 HOH B 105 805 206 HOH HOH . 
M 6 HOH B 106 806 193 HOH HOH . 
M 6 HOH B 107 807 205 HOH HOH . 
M 6 HOH B 108 808 185 HOH HOH . 
M 6 HOH B 109 809 167 HOH HOH . 
M 6 HOH B 110 810 169 HOH HOH . 
M 6 HOH B 111 811 182 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . G 2 21.005 -9.214 -9.293 1 79.33 ? S DMS 602 B 1 
HETATM 2 O O DMS . . . G 2 22.391 -8.611 -9.206 1 68.29 ? O DMS 602 B 1 
HETATM 3 C C1 DMS . . . G 2 19.93 -8.073 -8.466 1 70.62 ? C1 DMS 602 B 1 
HETATM 4 C C2 DMS . . . G 2 20.948 -10.499 -8.089 1 72.64 ? C2 DMS 602 B 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           231 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           4 
#