data_7NTE # _model_server_result.job_id v73XEY9RRgqnVQwOin1SxQ _model_server_result.datetime_utc '2024-11-06 12:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7NTE # _exptl.entry_id 7NTE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.39 _cell.angle_gamma 90 _cell.entry_id 7NTE _cell.length_a 63.77 _cell.length_b 63.62 _cell.length_c 73.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 62 A LYS 61 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc2 A OD1 ASP 224 A ASP 223 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc3 A OD2 ASP 226 A ASP 225 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc4 C MG MG . A MG 401 1_555 F O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 C MG MG . A MG 401 1_555 F O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc6 C MG MG . A MG 401 1_555 F O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc7 B O LYS 62 B LYS 61 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc8 B OD1 ASP 224 B ASP 223 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc9 B OD2 ASP 226 B ASP 225 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc10 D MG MG . B MG 401 1_555 G O HOH . B HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc11 D MG MG . B MG 401 1_555 G O HOH . B HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc12 D MG MG . B MG 401 1_555 G O HOH . B HOH 576 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc13 E MG MG . B MG 402 1_555 G O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc14 E MG MG . B MG 402 1_555 G O HOH . B HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NTE _atom_sites.fract_transf_matrix[1][1] 0.015681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003733 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015718 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 1 MG MG . D 2 MG B 1 401 2 MG MG . E 2 MG B 1 402 3 MG MG . F 3 HOH A 1 501 252 HOH HOH . F 3 HOH A 2 502 151 HOH HOH . F 3 HOH A 3 503 134 HOH HOH . F 3 HOH A 4 504 120 HOH HOH . F 3 HOH A 5 505 133 HOH HOH . F 3 HOH A 6 506 81 HOH HOH . F 3 HOH A 7 507 35 HOH HOH . F 3 HOH A 8 508 274 HOH HOH . F 3 HOH A 9 509 13 HOH HOH . F 3 HOH A 10 510 191 HOH HOH . F 3 HOH A 11 511 201 HOH HOH . F 3 HOH A 12 512 73 HOH HOH . F 3 HOH A 13 513 219 HOH HOH . F 3 HOH A 14 514 229 HOH HOH . F 3 HOH A 15 515 258 HOH HOH . F 3 HOH A 16 516 154 HOH HOH . F 3 HOH A 17 517 96 HOH HOH . F 3 HOH A 18 518 15 HOH HOH . F 3 HOH A 19 519 95 HOH HOH . F 3 HOH A 20 520 143 HOH HOH . F 3 HOH A 21 521 215 HOH HOH . F 3 HOH A 22 522 17 HOH HOH . F 3 HOH A 23 523 78 HOH HOH . F 3 HOH A 24 524 148 HOH HOH . F 3 HOH A 25 525 124 HOH HOH . F 3 HOH A 26 526 53 HOH HOH . F 3 HOH A 27 527 189 HOH HOH . F 3 HOH A 28 528 99 HOH HOH . F 3 HOH A 29 529 47 HOH HOH . F 3 HOH A 30 530 10 HOH HOH . F 3 HOH A 31 531 272 HOH HOH . F 3 HOH A 32 532 107 HOH HOH . F 3 HOH A 33 533 104 HOH HOH . F 3 HOH A 34 534 275 HOH HOH . F 3 HOH A 35 535 22 HOH HOH . F 3 HOH A 36 536 54 HOH HOH . F 3 HOH A 37 537 29 HOH HOH . F 3 HOH A 38 538 147 HOH HOH . F 3 HOH A 39 539 34 HOH HOH . F 3 HOH A 40 540 27 HOH HOH . F 3 HOH A 41 541 210 HOH HOH . F 3 HOH A 42 542 173 HOH HOH . F 3 HOH A 43 543 4 HOH HOH . F 3 HOH A 44 544 115 HOH HOH . F 3 HOH A 45 545 74 HOH HOH . F 3 HOH A 46 546 93 HOH HOH . F 3 HOH A 47 547 82 HOH HOH . F 3 HOH A 48 548 126 HOH HOH . F 3 HOH A 49 549 88 HOH HOH . F 3 HOH A 50 550 42 HOH HOH . F 3 HOH A 51 551 87 HOH HOH . F 3 HOH A 52 552 64 HOH HOH . F 3 HOH A 53 553 123 HOH HOH . F 3 HOH A 54 554 89 HOH HOH . F 3 HOH A 55 555 217 HOH HOH . F 3 HOH A 56 556 157 HOH HOH . F 3 HOH A 57 557 101 HOH HOH . F 3 HOH A 58 558 164 HOH HOH . F 3 HOH A 59 559 190 HOH HOH . F 3 HOH A 60 560 262 HOH HOH . F 3 HOH A 61 561 211 HOH HOH . F 3 HOH A 62 562 156 HOH HOH . F 3 HOH A 63 563 218 HOH HOH . F 3 HOH A 64 564 1 HOH HOH . F 3 HOH A 65 565 28 HOH HOH . F 3 HOH A 66 566 24 HOH HOH . F 3 HOH A 67 567 26 HOH HOH . F 3 HOH A 68 568 40 HOH HOH . F 3 HOH A 69 569 168 HOH HOH . F 3 HOH A 70 570 49 HOH HOH . F 3 HOH A 71 571 100 HOH HOH . F 3 HOH A 72 572 178 HOH HOH . F 3 HOH A 73 573 14 HOH HOH . F 3 HOH A 74 574 176 HOH HOH . F 3 HOH A 75 575 90 HOH HOH . F 3 HOH A 76 576 174 HOH HOH . F 3 HOH A 77 577 182 HOH HOH . F 3 HOH A 78 578 150 HOH HOH . F 3 HOH A 79 579 36 HOH HOH . F 3 HOH A 80 580 12 HOH HOH . F 3 HOH A 81 581 11 HOH HOH . F 3 HOH A 82 582 230 HOH HOH . F 3 HOH A 83 583 83 HOH HOH . F 3 HOH A 84 584 231 HOH HOH . F 3 HOH A 85 585 149 HOH HOH . F 3 HOH A 86 586 172 HOH HOH . F 3 HOH A 87 587 119 HOH HOH . F 3 HOH A 88 588 25 HOH HOH . F 3 HOH A 89 589 186 HOH HOH . F 3 HOH A 90 590 166 HOH HOH . F 3 HOH A 91 591 102 HOH HOH . F 3 HOH A 92 592 70 HOH HOH . F 3 HOH A 93 593 30 HOH HOH . F 3 HOH A 94 594 142 HOH HOH . F 3 HOH A 95 595 108 HOH HOH . F 3 HOH A 96 596 152 HOH HOH . F 3 HOH A 97 597 31 HOH HOH . F 3 HOH A 98 598 63 HOH HOH . F 3 HOH A 99 599 206 HOH HOH . F 3 HOH A 100 600 169 HOH HOH . F 3 HOH A 101 601 111 HOH HOH . F 3 HOH A 102 602 80 HOH HOH . F 3 HOH A 103 603 224 HOH HOH . F 3 HOH A 104 604 197 HOH HOH . F 3 HOH A 105 605 44 HOH HOH . F 3 HOH A 106 606 33 HOH HOH . F 3 HOH A 107 607 137 HOH HOH . F 3 HOH A 108 608 57 HOH HOH . F 3 HOH A 109 609 135 HOH HOH . F 3 HOH A 110 610 195 HOH HOH . F 3 HOH A 111 611 112 HOH HOH . F 3 HOH A 112 612 61 HOH HOH . F 3 HOH A 113 613 98 HOH HOH . F 3 HOH A 114 614 85 HOH HOH . F 3 HOH A 115 615 118 HOH HOH . F 3 HOH A 116 616 21 HOH HOH . F 3 HOH A 117 617 116 HOH HOH . F 3 HOH A 118 618 94 HOH HOH . F 3 HOH A 119 619 127 HOH HOH . F 3 HOH A 120 620 92 HOH HOH . F 3 HOH A 121 621 23 HOH HOH . F 3 HOH A 122 622 5 HOH HOH . F 3 HOH A 123 623 193 HOH HOH . F 3 HOH A 124 624 188 HOH HOH . F 3 HOH A 125 625 256 HOH HOH . F 3 HOH A 126 626 48 HOH HOH . F 3 HOH A 127 627 202 HOH HOH . F 3 HOH A 128 628 68 HOH HOH . F 3 HOH A 129 629 263 HOH HOH . F 3 HOH A 130 630 136 HOH HOH . F 3 HOH A 131 631 266 HOH HOH . F 3 HOH A 132 632 139 HOH HOH . F 3 HOH A 133 633 140 HOH HOH . F 3 HOH A 134 634 170 HOH HOH . F 3 HOH A 135 635 233 HOH HOH . F 3 HOH A 136 636 255 HOH HOH . F 3 HOH A 137 637 167 HOH HOH . F 3 HOH A 138 638 66 HOH HOH . F 3 HOH A 139 639 165 HOH HOH . F 3 HOH A 140 640 271 HOH HOH . F 3 HOH A 141 641 159 HOH HOH . F 3 HOH A 142 642 114 HOH HOH . F 3 HOH A 143 643 270 HOH HOH . G 3 HOH B 1 501 264 HOH HOH . G 3 HOH B 2 502 181 HOH HOH . G 3 HOH B 3 503 251 HOH HOH . G 3 HOH B 4 504 260 HOH HOH . G 3 HOH B 5 505 153 HOH HOH . G 3 HOH B 6 506 67 HOH HOH . G 3 HOH B 7 507 200 HOH HOH . G 3 HOH B 8 508 221 HOH HOH . G 3 HOH B 9 509 132 HOH HOH . G 3 HOH B 10 510 265 HOH HOH . G 3 HOH B 11 511 273 HOH HOH . G 3 HOH B 12 512 246 HOH HOH . G 3 HOH B 13 513 212 HOH HOH . G 3 HOH B 14 514 242 HOH HOH . G 3 HOH B 15 515 276 HOH HOH . G 3 HOH B 16 516 110 HOH HOH . G 3 HOH B 17 517 194 HOH HOH . G 3 HOH B 18 518 207 HOH HOH . G 3 HOH B 19 519 106 HOH HOH . G 3 HOH B 20 520 138 HOH HOH . G 3 HOH B 21 521 117 HOH HOH . G 3 HOH B 22 522 237 HOH HOH . G 3 HOH B 23 523 105 HOH HOH . G 3 HOH B 24 524 227 HOH HOH . G 3 HOH B 25 525 226 HOH HOH . G 3 HOH B 26 526 75 HOH HOH . G 3 HOH B 27 527 19 HOH HOH . G 3 HOH B 28 528 225 HOH HOH . G 3 HOH B 29 529 234 HOH HOH . G 3 HOH B 30 530 77 HOH HOH . G 3 HOH B 31 531 7 HOH HOH . G 3 HOH B 32 532 72 HOH HOH . G 3 HOH B 33 533 183 HOH HOH . G 3 HOH B 34 534 129 HOH HOH . G 3 HOH B 35 535 41 HOH HOH . G 3 HOH B 36 536 20 HOH HOH . G 3 HOH B 37 537 257 HOH HOH . G 3 HOH B 38 538 235 HOH HOH . G 3 HOH B 39 539 163 HOH HOH . G 3 HOH B 40 540 51 HOH HOH . G 3 HOH B 41 541 43 HOH HOH . G 3 HOH B 42 542 97 HOH HOH . G 3 HOH B 43 543 179 HOH HOH . G 3 HOH B 44 544 244 HOH HOH . G 3 HOH B 45 545 122 HOH HOH . G 3 HOH B 46 546 39 HOH HOH . G 3 HOH B 47 547 84 HOH HOH . G 3 HOH B 48 548 213 HOH HOH . G 3 HOH B 49 549 241 HOH HOH . G 3 HOH B 50 550 56 HOH HOH . G 3 HOH B 51 551 269 HOH HOH . G 3 HOH B 52 552 247 HOH HOH . G 3 HOH B 53 553 69 HOH HOH . G 3 HOH B 54 554 128 HOH HOH . G 3 HOH B 55 555 144 HOH HOH . G 3 HOH B 56 556 232 HOH HOH . G 3 HOH B 57 557 161 HOH HOH . G 3 HOH B 58 558 86 HOH HOH . G 3 HOH B 59 559 204 HOH HOH . G 3 HOH B 60 560 71 HOH HOH . G 3 HOH B 61 561 58 HOH HOH . G 3 HOH B 62 562 131 HOH HOH . G 3 HOH B 63 563 199 HOH HOH . G 3 HOH B 64 564 253 HOH HOH . G 3 HOH B 65 565 8 HOH HOH . G 3 HOH B 66 566 76 HOH HOH . G 3 HOH B 67 567 125 HOH HOH . G 3 HOH B 68 568 171 HOH HOH . G 3 HOH B 69 569 32 HOH HOH . G 3 HOH B 70 570 65 HOH HOH . G 3 HOH B 71 571 254 HOH HOH . G 3 HOH B 72 572 50 HOH HOH . G 3 HOH B 73 573 145 HOH HOH . G 3 HOH B 74 574 243 HOH HOH . G 3 HOH B 75 575 60 HOH HOH . G 3 HOH B 76 576 79 HOH HOH . G 3 HOH B 77 577 238 HOH HOH . G 3 HOH B 78 578 38 HOH HOH . G 3 HOH B 79 579 236 HOH HOH . G 3 HOH B 80 580 3 HOH HOH . G 3 HOH B 81 581 267 HOH HOH . G 3 HOH B 82 582 180 HOH HOH . G 3 HOH B 83 583 59 HOH HOH . G 3 HOH B 84 584 16 HOH HOH . G 3 HOH B 85 585 9 HOH HOH . G 3 HOH B 86 586 184 HOH HOH . G 3 HOH B 87 587 198 HOH HOH . G 3 HOH B 88 588 228 HOH HOH . G 3 HOH B 89 589 45 HOH HOH . G 3 HOH B 90 590 18 HOH HOH . G 3 HOH B 91 591 155 HOH HOH . G 3 HOH B 92 592 52 HOH HOH . G 3 HOH B 93 593 220 HOH HOH . G 3 HOH B 94 594 55 HOH HOH . G 3 HOH B 95 595 240 HOH HOH . G 3 HOH B 96 596 46 HOH HOH . G 3 HOH B 97 597 185 HOH HOH . G 3 HOH B 98 598 239 HOH HOH . G 3 HOH B 99 599 103 HOH HOH . G 3 HOH B 100 600 268 HOH HOH . G 3 HOH B 101 601 158 HOH HOH . G 3 HOH B 102 602 192 HOH HOH . G 3 HOH B 103 603 113 HOH HOH . G 3 HOH B 104 604 196 HOH HOH . G 3 HOH B 105 605 160 HOH HOH . G 3 HOH B 106 606 248 HOH HOH . G 3 HOH B 107 607 209 HOH HOH . G 3 HOH B 108 608 162 HOH HOH . G 3 HOH B 109 609 109 HOH HOH . G 3 HOH B 110 610 130 HOH HOH . G 3 HOH B 111 611 249 HOH HOH . G 3 HOH B 112 612 37 HOH HOH . G 3 HOH B 113 613 62 HOH HOH . G 3 HOH B 114 614 187 HOH HOH . G 3 HOH B 115 615 245 HOH HOH . G 3 HOH B 116 616 2 HOH HOH . G 3 HOH B 117 617 175 HOH HOH . G 3 HOH B 118 618 177 HOH HOH . G 3 HOH B 119 619 216 HOH HOH . G 3 HOH B 120 620 208 HOH HOH . G 3 HOH B 121 621 250 HOH HOH . G 3 HOH B 122 622 141 HOH HOH . G 3 HOH B 123 623 146 HOH HOH . G 3 HOH B 124 624 203 HOH HOH . G 3 HOH B 125 625 222 HOH HOH . G 3 HOH B 126 626 91 HOH HOH . G 3 HOH B 127 627 259 HOH HOH . G 3 HOH B 128 628 205 HOH HOH . G 3 HOH B 129 629 261 HOH HOH . G 3 HOH B 130 630 121 HOH HOH . G 3 HOH B 131 631 214 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 53.607 _atom_site.Cartn_y 20.162 _atom_site.Cartn_z 18.36 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #