data_7NTS # _model_server_result.job_id nvpAXR6FsFUisF6FJS5r1w _model_server_result.datetime_utc '2024-11-21 08:34:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nts # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7NTS # _exptl.entry_id 7NTS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.95 _cell.angle_gamma 90 _cell.entry_id 7NTS _cell.length_a 113.69 _cell.length_b 52.96 _cell.length_c 44.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NTS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 144 A SER 144 1_555 A N CSO 145 A CSO 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C CSO 145 A CSO 145 1_555 A N GLY 146 A GLY 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 97 n n S C1 DMS sing 98 n n S C2 DMS sing 99 n n C1 H11 DMS sing 100 n n C1 H12 DMS sing 101 n n C1 H13 DMS sing 102 n n C2 H21 DMS sing 103 n n C2 H22 DMS sing 104 n n C2 H23 DMS sing 105 n n # _atom_sites.entry_id 7NTS _atom_sites.fract_transf_matrix[1][1] 0.008796 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002023 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1 DMS DMS . C 2 DMS A 1 402 2 DMS DMS . D 2 DMS A 1 403 3 DMS DMS . E 2 DMS A 1 404 4 DMS DMS . F 2 DMS A 1 405 5 DMS DMS . G 3 GOL A 1 406 1 GOL GOL . H 4 FMT A 1 407 1 FMT FMT . I 4 FMT A 1 408 2 FMT FMT . J 4 FMT A 1 409 3 FMT FMT . K 4 FMT A 1 410 4 FMT FMT . L 4 FMT A 1 411 5 FMT FMT . M 4 FMT A 1 412 6 FMT FMT . N 4 FMT A 1 413 7 FMT FMT . O 4 FMT A 1 414 8 FMT FMT . P 4 FMT A 1 415 9 FMT FMT . Q 5 HOH A 1 501 212 HOH HOH . Q 5 HOH A 2 502 200 HOH HOH . Q 5 HOH A 3 503 213 HOH HOH . Q 5 HOH A 4 504 53 HOH HOH . Q 5 HOH A 5 505 230 HOH HOH . Q 5 HOH A 6 506 125 HOH HOH . Q 5 HOH A 7 507 241 HOH HOH . Q 5 HOH A 8 508 138 HOH HOH . Q 5 HOH A 9 509 90 HOH HOH . Q 5 HOH A 10 510 115 HOH HOH . Q 5 HOH A 11 511 86 HOH HOH . Q 5 HOH A 12 512 243 HOH HOH . Q 5 HOH A 13 513 69 HOH HOH . Q 5 HOH A 14 514 149 HOH HOH . Q 5 HOH A 15 515 109 HOH HOH . Q 5 HOH A 16 516 221 HOH HOH . Q 5 HOH A 17 517 218 HOH HOH . Q 5 HOH A 18 518 59 HOH HOH . Q 5 HOH A 19 519 190 HOH HOH . Q 5 HOH A 20 520 19 HOH HOH . Q 5 HOH A 21 521 20 HOH HOH . Q 5 HOH A 22 522 237 HOH HOH . Q 5 HOH A 23 523 175 HOH HOH . Q 5 HOH A 24 524 146 HOH HOH . Q 5 HOH A 25 525 2 HOH HOH . Q 5 HOH A 26 526 88 HOH HOH . Q 5 HOH A 27 527 81 HOH HOH . Q 5 HOH A 28 528 145 HOH HOH . Q 5 HOH A 29 529 136 HOH HOH . Q 5 HOH A 30 530 176 HOH HOH . Q 5 HOH A 31 531 58 HOH HOH . Q 5 HOH A 32 532 121 HOH HOH . Q 5 HOH A 33 533 124 HOH HOH . Q 5 HOH A 34 534 75 HOH HOH . Q 5 HOH A 35 535 80 HOH HOH . Q 5 HOH A 36 536 148 HOH HOH . Q 5 HOH A 37 537 65 HOH HOH . Q 5 HOH A 38 538 94 HOH HOH . Q 5 HOH A 39 539 188 HOH HOH . Q 5 HOH A 40 540 87 HOH HOH . Q 5 HOH A 41 541 67 HOH HOH . Q 5 HOH A 42 542 126 HOH HOH . Q 5 HOH A 43 543 103 HOH HOH . Q 5 HOH A 44 544 105 HOH HOH . Q 5 HOH A 45 545 171 HOH HOH . Q 5 HOH A 46 546 225 HOH HOH . Q 5 HOH A 47 547 123 HOH HOH . Q 5 HOH A 48 548 142 HOH HOH . Q 5 HOH A 49 549 137 HOH HOH . Q 5 HOH A 50 550 41 HOH HOH . Q 5 HOH A 51 551 151 HOH HOH . Q 5 HOH A 52 552 10 HOH HOH . Q 5 HOH A 53 553 210 HOH HOH . Q 5 HOH A 54 554 37 HOH HOH . Q 5 HOH A 55 555 199 HOH HOH . Q 5 HOH A 56 556 5 HOH HOH . Q 5 HOH A 57 557 134 HOH HOH . Q 5 HOH A 58 558 122 HOH HOH . Q 5 HOH A 59 559 116 HOH HOH . Q 5 HOH A 60 560 135 HOH HOH . Q 5 HOH A 61 561 83 HOH HOH . Q 5 HOH A 62 562 27 HOH HOH . Q 5 HOH A 63 563 104 HOH HOH . Q 5 HOH A 64 564 23 HOH HOH . Q 5 HOH A 65 565 140 HOH HOH . Q 5 HOH A 66 566 128 HOH HOH . Q 5 HOH A 67 567 117 HOH HOH . Q 5 HOH A 68 568 139 HOH HOH . Q 5 HOH A 69 569 100 HOH HOH . Q 5 HOH A 70 570 7 HOH HOH . Q 5 HOH A 71 571 98 HOH HOH . Q 5 HOH A 72 572 150 HOH HOH . Q 5 HOH A 73 573 172 HOH HOH . Q 5 HOH A 74 574 13 HOH HOH . Q 5 HOH A 75 575 165 HOH HOH . Q 5 HOH A 76 576 131 HOH HOH . Q 5 HOH A 77 577 61 HOH HOH . Q 5 HOH A 78 578 129 HOH HOH . Q 5 HOH A 79 579 56 HOH HOH . Q 5 HOH A 80 580 141 HOH HOH . Q 5 HOH A 81 581 66 HOH HOH . Q 5 HOH A 82 582 95 HOH HOH . Q 5 HOH A 83 583 89 HOH HOH . Q 5 HOH A 84 584 36 HOH HOH . Q 5 HOH A 85 585 236 HOH HOH . Q 5 HOH A 86 586 185 HOH HOH . Q 5 HOH A 87 587 3 HOH HOH . Q 5 HOH A 88 588 106 HOH HOH . Q 5 HOH A 89 589 76 HOH HOH . Q 5 HOH A 90 590 110 HOH HOH . Q 5 HOH A 91 591 32 HOH HOH . Q 5 HOH A 92 592 71 HOH HOH . Q 5 HOH A 93 593 163 HOH HOH . Q 5 HOH A 94 594 202 HOH HOH . Q 5 HOH A 95 595 93 HOH HOH . Q 5 HOH A 96 596 8 HOH HOH . Q 5 HOH A 97 597 1 HOH HOH . Q 5 HOH A 98 598 42 HOH HOH . Q 5 HOH A 99 599 57 HOH HOH . Q 5 HOH A 100 600 204 HOH HOH . Q 5 HOH A 101 601 48 HOH HOH . Q 5 HOH A 102 602 31 HOH HOH . Q 5 HOH A 103 603 60 HOH HOH . Q 5 HOH A 104 604 155 HOH HOH . Q 5 HOH A 105 605 43 HOH HOH . Q 5 HOH A 106 606 47 HOH HOH . Q 5 HOH A 107 607 144 HOH HOH . Q 5 HOH A 108 608 159 HOH HOH . Q 5 HOH A 109 609 44 HOH HOH . Q 5 HOH A 110 610 15 HOH HOH . Q 5 HOH A 111 611 38 HOH HOH . Q 5 HOH A 112 612 113 HOH HOH . Q 5 HOH A 113 613 30 HOH HOH . Q 5 HOH A 114 614 207 HOH HOH . Q 5 HOH A 115 615 160 HOH HOH . Q 5 HOH A 116 616 120 HOH HOH . Q 5 HOH A 117 617 192 HOH HOH . Q 5 HOH A 118 618 14 HOH HOH . Q 5 HOH A 119 619 46 HOH HOH . Q 5 HOH A 120 620 201 HOH HOH . Q 5 HOH A 121 621 107 HOH HOH . Q 5 HOH A 122 622 11 HOH HOH . Q 5 HOH A 123 623 127 HOH HOH . Q 5 HOH A 124 624 114 HOH HOH . Q 5 HOH A 125 625 179 HOH HOH . Q 5 HOH A 126 626 26 HOH HOH . Q 5 HOH A 127 627 133 HOH HOH . Q 5 HOH A 128 628 233 HOH HOH . Q 5 HOH A 129 629 21 HOH HOH . Q 5 HOH A 130 630 73 HOH HOH . Q 5 HOH A 131 631 181 HOH HOH . Q 5 HOH A 132 632 40 HOH HOH . Q 5 HOH A 133 633 166 HOH HOH . Q 5 HOH A 134 634 183 HOH HOH . Q 5 HOH A 135 635 70 HOH HOH . Q 5 HOH A 136 636 55 HOH HOH . Q 5 HOH A 137 637 205 HOH HOH . Q 5 HOH A 138 638 28 HOH HOH . Q 5 HOH A 139 639 62 HOH HOH . Q 5 HOH A 140 640 111 HOH HOH . Q 5 HOH A 141 641 143 HOH HOH . Q 5 HOH A 142 642 22 HOH HOH . Q 5 HOH A 143 643 49 HOH HOH . Q 5 HOH A 144 644 35 HOH HOH . Q 5 HOH A 145 645 108 HOH HOH . Q 5 HOH A 146 646 18 HOH HOH . Q 5 HOH A 147 647 91 HOH HOH . Q 5 HOH A 148 648 244 HOH HOH . Q 5 HOH A 149 649 178 HOH HOH . Q 5 HOH A 150 650 235 HOH HOH . Q 5 HOH A 151 651 170 HOH HOH . Q 5 HOH A 152 652 52 HOH HOH . Q 5 HOH A 153 653 187 HOH HOH . Q 5 HOH A 154 654 85 HOH HOH . Q 5 HOH A 155 655 25 HOH HOH . Q 5 HOH A 156 656 186 HOH HOH . Q 5 HOH A 157 657 72 HOH HOH . Q 5 HOH A 158 658 54 HOH HOH . Q 5 HOH A 159 659 154 HOH HOH . Q 5 HOH A 160 660 101 HOH HOH . Q 5 HOH A 161 661 63 HOH HOH . Q 5 HOH A 162 662 17 HOH HOH . Q 5 HOH A 163 663 182 HOH HOH . Q 5 HOH A 164 664 102 HOH HOH . Q 5 HOH A 165 665 64 HOH HOH . Q 5 HOH A 166 666 68 HOH HOH . Q 5 HOH A 167 667 24 HOH HOH . Q 5 HOH A 168 668 6 HOH HOH . Q 5 HOH A 169 669 206 HOH HOH . Q 5 HOH A 170 670 51 HOH HOH . Q 5 HOH A 171 671 198 HOH HOH . Q 5 HOH A 172 672 227 HOH HOH . Q 5 HOH A 173 673 78 HOH HOH . Q 5 HOH A 174 674 226 HOH HOH . Q 5 HOH A 175 675 162 HOH HOH . Q 5 HOH A 176 676 82 HOH HOH . Q 5 HOH A 177 677 147 HOH HOH . Q 5 HOH A 178 678 153 HOH HOH . Q 5 HOH A 179 679 4 HOH HOH . Q 5 HOH A 180 680 45 HOH HOH . Q 5 HOH A 181 681 50 HOH HOH . Q 5 HOH A 182 682 209 HOH HOH . Q 5 HOH A 183 683 9 HOH HOH . Q 5 HOH A 184 684 39 HOH HOH . Q 5 HOH A 185 685 99 HOH HOH . Q 5 HOH A 186 686 232 HOH HOH . Q 5 HOH A 187 687 96 HOH HOH . Q 5 HOH A 188 688 219 HOH HOH . Q 5 HOH A 189 689 208 HOH HOH . Q 5 HOH A 190 690 29 HOH HOH . Q 5 HOH A 191 691 177 HOH HOH . Q 5 HOH A 192 692 92 HOH HOH . Q 5 HOH A 193 693 112 HOH HOH . Q 5 HOH A 194 694 119 HOH HOH . Q 5 HOH A 195 695 214 HOH HOH . Q 5 HOH A 196 696 16 HOH HOH . Q 5 HOH A 197 697 242 HOH HOH . Q 5 HOH A 198 698 222 HOH HOH . Q 5 HOH A 199 699 33 HOH HOH . Q 5 HOH A 200 700 203 HOH HOH . Q 5 HOH A 201 701 220 HOH HOH . Q 5 HOH A 202 702 211 HOH HOH . Q 5 HOH A 203 703 168 HOH HOH . Q 5 HOH A 204 704 156 HOH HOH . Q 5 HOH A 205 705 194 HOH HOH . Q 5 HOH A 206 706 196 HOH HOH . Q 5 HOH A 207 707 158 HOH HOH . Q 5 HOH A 208 708 239 HOH HOH . Q 5 HOH A 209 709 164 HOH HOH . Q 5 HOH A 210 710 193 HOH HOH . Q 5 HOH A 211 711 191 HOH HOH . Q 5 HOH A 212 712 245 HOH HOH . Q 5 HOH A 213 713 238 HOH HOH . Q 5 HOH A 214 714 97 HOH HOH . Q 5 HOH A 215 715 180 HOH HOH . Q 5 HOH A 216 716 130 HOH HOH . Q 5 HOH A 217 717 174 HOH HOH . Q 5 HOH A 218 718 228 HOH HOH . Q 5 HOH A 219 719 157 HOH HOH . Q 5 HOH A 220 720 118 HOH HOH . Q 5 HOH A 221 721 217 HOH HOH . Q 5 HOH A 222 722 234 HOH HOH . Q 5 HOH A 223 723 229 HOH HOH . Q 5 HOH A 224 724 215 HOH HOH . Q 5 HOH A 225 725 173 HOH HOH . Q 5 HOH A 226 726 12 HOH HOH . Q 5 HOH A 227 727 223 HOH HOH . Q 5 HOH A 228 728 231 HOH HOH . Q 5 HOH A 229 729 224 HOH HOH . Q 5 HOH A 230 730 77 HOH HOH . Q 5 HOH A 231 731 197 HOH HOH . Q 5 HOH A 232 732 216 HOH HOH . Q 5 HOH A 233 733 195 HOH HOH . Q 5 HOH A 234 734 152 HOH HOH . Q 5 HOH A 235 735 34 HOH HOH . Q 5 HOH A 236 736 189 HOH HOH . Q 5 HOH A 237 737 240 HOH HOH . Q 5 HOH A 238 738 132 HOH HOH . Q 5 HOH A 239 739 169 HOH HOH . Q 5 HOH A 240 740 74 HOH HOH . Q 5 HOH A 241 741 184 HOH HOH . Q 5 HOH A 242 742 161 HOH HOH . Q 5 HOH A 243 743 84 HOH HOH . Q 5 HOH A 244 744 79 HOH HOH . Q 5 HOH A 245 745 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 7.111 -28.1 21.593 1 24.28 0 S DMS 402 A 1 HETATM 2 O O DMS . . . C 2 7.804 -27.09 22.397 1 23.36 0 O DMS 402 A 1 HETATM 3 C C1 DMS . . . C 2 6.058 -27.182 20.498 1 23.38 0 C1 DMS 402 A 1 HETATM 4 C C2 DMS . . . C 2 5.809 -28.736 22.658 1 24.09 0 C2 DMS 402 A 1 HETATM 5 H H11 DMS . . . C 2 5.542 -27.796 19.958 1 23.38 0 H11 DMS 402 A 1 HETATM 6 H H12 DMS . . . C 2 6.599 -26.624 19.925 1 23.38 0 H12 DMS 402 A 1 HETATM 7 H H13 DMS . . . C 2 5.459 -26.628 21.017 1 23.38 0 H13 DMS 402 A 1 HETATM 8 H H21 DMS . . . C 2 5.283 -29.384 22.17 1 24.09 0 H21 DMS 402 A 1 HETATM 9 H H22 DMS . . . C 2 5.241 -28.007 22.942 1 24.09 0 H22 DMS 402 A 1 HETATM 10 H H23 DMS . . . C 2 6.205 -29.158 23.433 1 24.09 0 H23 DMS 402 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 10 #