data_7NU3 # _model_server_result.job_id Y8NRHEP4zbvN9VNtAqaEsw _model_server_result.datetime_utc '2024-10-19 12:42:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1004}' # _entry.id 7NU3 # _exptl.entry_id 7NU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NU3 _cell.length_a 48.878 _cell.length_b 82.214 _cell.length_c 227.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 450 A CYS 449 1_555 E ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc2 A SG CYS 453 A CYS 452 1_555 E ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc3 A SG CYS 491 A CYS 490 1_555 E ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc4 A SG CYS 494 A CYS 493 1_555 E ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc5 G MG MG . A MG 1006 1_555 H O HOH . A HOH 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc6 G MG MG . A MG 1006 1_555 H O HOH . A HOH 1286 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NU3 _atom_sites.fract_transf_matrix[1][1] 0.020459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1001 1001 EDO EDO . C 3 DCL A 1 1002 1101 DCL DCL . D 4 ATP A 1 1003 1201 ATP ATP . E 5 ZN A 1 1004 1301 ZN ZN . F 4 ATP A 1 1005 1401 ATP ATP . G 6 MG A 1 1006 1 MG MG . H 7 HOH A 1 1101 84 HOH HOH . H 7 HOH A 2 1102 112 HOH HOH . H 7 HOH A 3 1103 221 HOH HOH . H 7 HOH A 4 1104 166 HOH HOH . H 7 HOH A 5 1105 241 HOH HOH . H 7 HOH A 6 1106 67 HOH HOH . H 7 HOH A 7 1107 56 HOH HOH . H 7 HOH A 8 1108 103 HOH HOH . H 7 HOH A 9 1109 199 HOH HOH . H 7 HOH A 10 1110 254 HOH HOH . H 7 HOH A 11 1111 5 HOH HOH . H 7 HOH A 12 1112 154 HOH HOH . H 7 HOH A 13 1113 29 HOH HOH . H 7 HOH A 14 1114 230 HOH HOH . H 7 HOH A 15 1115 1 HOH HOH . H 7 HOH A 16 1116 44 HOH HOH . H 7 HOH A 17 1117 94 HOH HOH . H 7 HOH A 18 1118 195 HOH HOH . H 7 HOH A 19 1119 22 HOH HOH . H 7 HOH A 20 1120 109 HOH HOH . H 7 HOH A 21 1121 96 HOH HOH . H 7 HOH A 22 1122 202 HOH HOH . H 7 HOH A 23 1123 114 HOH HOH . H 7 HOH A 24 1124 116 HOH HOH . H 7 HOH A 25 1125 238 HOH HOH . H 7 HOH A 26 1126 69 HOH HOH . H 7 HOH A 27 1127 60 HOH HOH . H 7 HOH A 28 1128 128 HOH HOH . H 7 HOH A 29 1129 57 HOH HOH . H 7 HOH A 30 1130 47 HOH HOH . H 7 HOH A 31 1131 79 HOH HOH . H 7 HOH A 32 1132 204 HOH HOH . H 7 HOH A 33 1133 33 HOH HOH . H 7 HOH A 34 1134 3 HOH HOH . H 7 HOH A 35 1135 66 HOH HOH . H 7 HOH A 36 1136 31 HOH HOH . H 7 HOH A 37 1137 42 HOH HOH . H 7 HOH A 38 1138 50 HOH HOH . H 7 HOH A 39 1139 25 HOH HOH . H 7 HOH A 40 1140 61 HOH HOH . H 7 HOH A 41 1141 234 HOH HOH . H 7 HOH A 42 1142 92 HOH HOH . H 7 HOH A 43 1143 53 HOH HOH . H 7 HOH A 44 1144 77 HOH HOH . H 7 HOH A 45 1145 52 HOH HOH . H 7 HOH A 46 1146 136 HOH HOH . H 7 HOH A 47 1147 123 HOH HOH . H 7 HOH A 48 1148 71 HOH HOH . H 7 HOH A 49 1149 38 HOH HOH . H 7 HOH A 50 1150 190 HOH HOH . H 7 HOH A 51 1151 193 HOH HOH . H 7 HOH A 52 1152 251 HOH HOH . H 7 HOH A 53 1153 130 HOH HOH . H 7 HOH A 54 1154 126 HOH HOH . H 7 HOH A 55 1155 174 HOH HOH . H 7 HOH A 56 1156 37 HOH HOH . H 7 HOH A 57 1157 122 HOH HOH . H 7 HOH A 58 1158 104 HOH HOH . H 7 HOH A 59 1159 138 HOH HOH . H 7 HOH A 60 1160 169 HOH HOH . H 7 HOH A 61 1161 30 HOH HOH . H 7 HOH A 62 1162 15 HOH HOH . H 7 HOH A 63 1163 32 HOH HOH . H 7 HOH A 64 1164 97 HOH HOH . H 7 HOH A 65 1165 121 HOH HOH . H 7 HOH A 66 1166 120 HOH HOH . H 7 HOH A 67 1167 48 HOH HOH . H 7 HOH A 68 1168 119 HOH HOH . H 7 HOH A 69 1169 106 HOH HOH . H 7 HOH A 70 1170 45 HOH HOH . H 7 HOH A 71 1171 40 HOH HOH . H 7 HOH A 72 1172 113 HOH HOH . H 7 HOH A 73 1173 156 HOH HOH . H 7 HOH A 74 1174 157 HOH HOH . H 7 HOH A 75 1175 153 HOH HOH . H 7 HOH A 76 1176 95 HOH HOH . H 7 HOH A 77 1177 108 HOH HOH . H 7 HOH A 78 1178 54 HOH HOH . H 7 HOH A 79 1179 4 HOH HOH . H 7 HOH A 80 1180 19 HOH HOH . H 7 HOH A 81 1181 147 HOH HOH . H 7 HOH A 82 1182 26 HOH HOH . H 7 HOH A 83 1183 229 HOH HOH . H 7 HOH A 84 1184 39 HOH HOH . H 7 HOH A 85 1185 6 HOH HOH . H 7 HOH A 86 1186 107 HOH HOH . H 7 HOH A 87 1187 20 HOH HOH . H 7 HOH A 88 1188 83 HOH HOH . H 7 HOH A 89 1189 91 HOH HOH . H 7 HOH A 90 1190 72 HOH HOH . H 7 HOH A 91 1191 13 HOH HOH . H 7 HOH A 92 1192 35 HOH HOH . H 7 HOH A 93 1193 55 HOH HOH . H 7 HOH A 94 1194 14 HOH HOH . H 7 HOH A 95 1195 78 HOH HOH . H 7 HOH A 96 1196 110 HOH HOH . H 7 HOH A 97 1197 8 HOH HOH . H 7 HOH A 98 1198 16 HOH HOH . H 7 HOH A 99 1199 51 HOH HOH . H 7 HOH A 100 1200 49 HOH HOH . H 7 HOH A 101 1201 224 HOH HOH . H 7 HOH A 102 1202 132 HOH HOH . H 7 HOH A 103 1203 168 HOH HOH . H 7 HOH A 104 1204 9 HOH HOH . H 7 HOH A 105 1205 117 HOH HOH . H 7 HOH A 106 1206 131 HOH HOH . H 7 HOH A 107 1207 145 HOH HOH . H 7 HOH A 108 1208 225 HOH HOH . H 7 HOH A 109 1209 17 HOH HOH . H 7 HOH A 110 1210 70 HOH HOH . H 7 HOH A 111 1211 93 HOH HOH . H 7 HOH A 112 1212 135 HOH HOH . H 7 HOH A 113 1213 125 HOH HOH . H 7 HOH A 114 1214 7 HOH HOH . H 7 HOH A 115 1215 36 HOH HOH . H 7 HOH A 116 1216 2 HOH HOH . H 7 HOH A 117 1217 10 HOH HOH . H 7 HOH A 118 1218 58 HOH HOH . H 7 HOH A 119 1219 80 HOH HOH . H 7 HOH A 120 1220 98 HOH HOH . H 7 HOH A 121 1221 155 HOH HOH . H 7 HOH A 122 1222 162 HOH HOH . H 7 HOH A 123 1223 159 HOH HOH . H 7 HOH A 124 1224 101 HOH HOH . H 7 HOH A 125 1225 124 HOH HOH . H 7 HOH A 126 1226 141 HOH HOH . H 7 HOH A 127 1227 255 HOH HOH . H 7 HOH A 128 1228 219 HOH HOH . H 7 HOH A 129 1229 242 HOH HOH . H 7 HOH A 130 1230 12 HOH HOH . H 7 HOH A 131 1231 76 HOH HOH . H 7 HOH A 132 1232 160 HOH HOH . H 7 HOH A 133 1233 185 HOH HOH . H 7 HOH A 134 1234 163 HOH HOH . H 7 HOH A 135 1235 102 HOH HOH . H 7 HOH A 136 1236 181 HOH HOH . H 7 HOH A 137 1237 239 HOH HOH . H 7 HOH A 138 1238 140 HOH HOH . H 7 HOH A 139 1239 143 HOH HOH . H 7 HOH A 140 1240 142 HOH HOH . H 7 HOH A 141 1241 129 HOH HOH . H 7 HOH A 142 1242 27 HOH HOH . H 7 HOH A 143 1243 63 HOH HOH . H 7 HOH A 144 1244 164 HOH HOH . H 7 HOH A 145 1245 21 HOH HOH . H 7 HOH A 146 1246 41 HOH HOH . H 7 HOH A 147 1247 176 HOH HOH . H 7 HOH A 148 1248 150 HOH HOH . H 7 HOH A 149 1249 18 HOH HOH . H 7 HOH A 150 1250 252 HOH HOH . H 7 HOH A 151 1251 227 HOH HOH . H 7 HOH A 152 1252 43 HOH HOH . H 7 HOH A 153 1253 137 HOH HOH . H 7 HOH A 154 1254 146 HOH HOH . H 7 HOH A 155 1255 82 HOH HOH . H 7 HOH A 156 1256 100 HOH HOH . H 7 HOH A 157 1257 115 HOH HOH . H 7 HOH A 158 1258 34 HOH HOH . H 7 HOH A 159 1259 209 HOH HOH . H 7 HOH A 160 1260 172 HOH HOH . H 7 HOH A 161 1261 74 HOH HOH . H 7 HOH A 162 1262 192 HOH HOH . H 7 HOH A 163 1263 87 HOH HOH . H 7 HOH A 164 1264 231 HOH HOH . H 7 HOH A 165 1265 175 HOH HOH . H 7 HOH A 166 1266 196 HOH HOH . H 7 HOH A 167 1267 28 HOH HOH . H 7 HOH A 168 1268 144 HOH HOH . H 7 HOH A 169 1269 105 HOH HOH . H 7 HOH A 170 1270 73 HOH HOH . H 7 HOH A 171 1271 235 HOH HOH . H 7 HOH A 172 1272 11 HOH HOH . H 7 HOH A 173 1273 214 HOH HOH . H 7 HOH A 174 1274 62 HOH HOH . H 7 HOH A 175 1275 23 HOH HOH . H 7 HOH A 176 1276 244 HOH HOH . H 7 HOH A 177 1277 81 HOH HOH . H 7 HOH A 178 1278 167 HOH HOH . H 7 HOH A 179 1279 217 HOH HOH . H 7 HOH A 180 1280 173 HOH HOH . H 7 HOH A 181 1281 211 HOH HOH . H 7 HOH A 182 1282 256 HOH HOH . H 7 HOH A 183 1283 85 HOH HOH . H 7 HOH A 184 1284 198 HOH HOH . H 7 HOH A 185 1285 158 HOH HOH . H 7 HOH A 186 1286 216 HOH HOH . H 7 HOH A 187 1287 111 HOH HOH . H 7 HOH A 188 1288 46 HOH HOH . H 7 HOH A 189 1289 228 HOH HOH . H 7 HOH A 190 1290 203 HOH HOH . H 7 HOH A 191 1291 183 HOH HOH . H 7 HOH A 192 1292 180 HOH HOH . H 7 HOH A 193 1293 65 HOH HOH . H 7 HOH A 194 1294 165 HOH HOH . H 7 HOH A 195 1295 179 HOH HOH . H 7 HOH A 196 1296 118 HOH HOH . H 7 HOH A 197 1297 233 HOH HOH . H 7 HOH A 198 1298 182 HOH HOH . H 7 HOH A 199 1299 237 HOH HOH . H 7 HOH A 200 1300 151 HOH HOH . H 7 HOH A 201 1301 253 HOH HOH . H 7 HOH A 202 1302 258 HOH HOH . H 7 HOH A 203 1303 205 HOH HOH . H 7 HOH A 204 1304 194 HOH HOH . H 7 HOH A 205 1305 59 HOH HOH . H 7 HOH A 206 1306 222 HOH HOH . H 7 HOH A 207 1307 170 HOH HOH . H 7 HOH A 208 1308 208 HOH HOH . H 7 HOH A 209 1309 127 HOH HOH . H 7 HOH A 210 1310 24 HOH HOH . H 7 HOH A 211 1311 206 HOH HOH . H 7 HOH A 212 1312 210 HOH HOH . H 7 HOH A 213 1313 148 HOH HOH . H 7 HOH A 214 1314 245 HOH HOH . H 7 HOH A 215 1315 171 HOH HOH . H 7 HOH A 216 1316 220 HOH HOH . H 7 HOH A 217 1317 212 HOH HOH . H 7 HOH A 218 1318 89 HOH HOH . H 7 HOH A 219 1319 134 HOH HOH . H 7 HOH A 220 1320 184 HOH HOH . H 7 HOH A 221 1321 139 HOH HOH . H 7 HOH A 222 1322 197 HOH HOH . H 7 HOH A 223 1323 236 HOH HOH . H 7 HOH A 224 1324 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 32.382 _atom_site.Cartn_y 13.951 _atom_site.Cartn_z -23.741 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 563 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #