data_7NUG # _model_server_result.job_id n1QHKXsySXVbU5bEsdYEEw _model_server_result.datetime_utc '2024-11-16 06:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7NUG # _exptl.entry_id 7NUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NUG _cell.length_a 74.361 _cell.length_b 74.361 _cell.length_c 126.462 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G C5 PG4 . A PG4 206 1_555 K C3 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.55 ? covale ? covale2 G C6 PG4 . A PG4 206 1_555 K C4 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.086 ? covale ? covale3 G C6 PG4 . A PG4 206 1_555 K C3 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? covale ? covale4 G O4 PG4 . A PG4 206 1_555 K C3 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale5 G C7 PG4 . A PG4 206 1_555 K O2 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.497 ? covale ? covale6 G C7 PG4 . A PG4 206 1_555 K C1 PEG . A PEG 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.19 ? metalc ? metalc1 A NE2 HIS 44 A HIS 41 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc2 A OE1 GLU 64 A GLU 80 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A OE1 GLU 64 A GLU 80 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc4 A OD2 ASP 92 A ASP 108 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 A OD1 ASP 92 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc6 A OD1 ASP 92 A ASP 108 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc7 A OE2 GLU 103 A GLU 119 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc8 A O ILE 104 A ILE 120 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc9 B MN MN . A MN 201 1_555 M O10 USE . A USE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc10 B MN MN . A MN 201 1_555 M O11 USE . A USE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc11 C MN MN . A MN 202 1_555 M O10 USE . A USE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc12 C MN MN . A MN 202 1_555 N O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc13 C MN MN . A MN 202 1_555 N O HOH . A HOH 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc14 C MN MN . A MN 202 1_555 N O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc15 D MG MG . A MG 203 1_555 M O10 USE . A USE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc16 D MG MG . A MG 203 1_555 N O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc17 D MG MG . A MG 203 1_555 N O HOH . A HOH 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc18 D MG MG . A MG 203 1_555 N O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NUG _atom_sites.fract_transf_matrix[1][1] 0.013448 _atom_sites.fract_transf_matrix[1][2] 0.007764 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 201 1 MN MN . C 2 MN A 1 202 2 MN MN . D 3 MG A 1 203 3 MG MG . E 4 PEG A 1 204 1 PEG PEG . F 4 PEG A 1 205 2 PEG PEG . G 5 PG4 A 1 206 3 PG4 PG4 . H 6 EDO A 1 207 4 EDO EDO . I 6 EDO A 1 208 5 EDO EDO . J 6 EDO A 1 209 6 EDO EDO . K 4 PEG A 1 210 7 PEG PEG . L 7 1PG A 1 211 8 1PG 1PG . M 8 USE A 1 212 1 USE LIG . N 9 HOH A 1 301 177 HOH HOH . N 9 HOH A 2 302 144 HOH HOH . N 9 HOH A 3 303 165 HOH HOH . N 9 HOH A 4 304 33 HOH HOH . N 9 HOH A 5 305 49 HOH HOH . N 9 HOH A 6 306 178 HOH HOH . N 9 HOH A 7 307 113 HOH HOH . N 9 HOH A 8 308 20 HOH HOH . N 9 HOH A 9 309 89 HOH HOH . N 9 HOH A 10 310 182 HOH HOH . N 9 HOH A 11 311 145 HOH HOH . N 9 HOH A 12 312 65 HOH HOH . N 9 HOH A 13 313 124 HOH HOH . N 9 HOH A 14 314 180 HOH HOH . N 9 HOH A 15 315 137 HOH HOH . N 9 HOH A 16 316 136 HOH HOH . N 9 HOH A 17 317 187 HOH HOH . N 9 HOH A 18 318 30 HOH HOH . N 9 HOH A 19 319 97 HOH HOH . N 9 HOH A 20 320 121 HOH HOH . N 9 HOH A 21 321 161 HOH HOH . N 9 HOH A 22 322 22 HOH HOH . N 9 HOH A 23 323 29 HOH HOH . N 9 HOH A 24 324 5 HOH HOH . N 9 HOH A 25 325 158 HOH HOH . N 9 HOH A 26 326 61 HOH HOH . N 9 HOH A 27 327 57 HOH HOH . N 9 HOH A 28 328 51 HOH HOH . N 9 HOH A 29 329 34 HOH HOH . N 9 HOH A 30 330 76 HOH HOH . N 9 HOH A 31 331 66 HOH HOH . N 9 HOH A 32 332 80 HOH HOH . N 9 HOH A 33 333 91 HOH HOH . N 9 HOH A 34 334 114 HOH HOH . N 9 HOH A 35 335 110 HOH HOH . N 9 HOH A 36 336 99 HOH HOH . N 9 HOH A 37 337 54 HOH HOH . N 9 HOH A 38 338 6 HOH HOH . N 9 HOH A 39 339 14 HOH HOH . N 9 HOH A 40 340 39 HOH HOH . N 9 HOH A 41 341 135 HOH HOH . N 9 HOH A 42 342 120 HOH HOH . N 9 HOH A 43 343 75 HOH HOH . N 9 HOH A 44 344 18 HOH HOH . N 9 HOH A 45 345 159 HOH HOH . N 9 HOH A 46 346 133 HOH HOH . N 9 HOH A 47 347 100 HOH HOH . N 9 HOH A 48 348 154 HOH HOH . N 9 HOH A 49 349 82 HOH HOH . N 9 HOH A 50 350 45 HOH HOH . N 9 HOH A 51 351 107 HOH HOH . N 9 HOH A 52 352 11 HOH HOH . N 9 HOH A 53 353 108 HOH HOH . N 9 HOH A 54 354 71 HOH HOH . N 9 HOH A 55 355 25 HOH HOH . N 9 HOH A 56 356 73 HOH HOH . N 9 HOH A 57 357 189 HOH HOH . N 9 HOH A 58 358 109 HOH HOH . N 9 HOH A 59 359 171 HOH HOH . N 9 HOH A 60 360 94 HOH HOH . N 9 HOH A 61 361 21 HOH HOH . N 9 HOH A 62 362 70 HOH HOH . N 9 HOH A 63 363 190 HOH HOH . N 9 HOH A 64 364 101 HOH HOH . N 9 HOH A 65 365 41 HOH HOH . N 9 HOH A 66 366 188 HOH HOH . N 9 HOH A 67 367 32 HOH HOH . N 9 HOH A 68 368 23 HOH HOH . N 9 HOH A 69 369 179 HOH HOH . N 9 HOH A 70 370 58 HOH HOH . N 9 HOH A 71 371 2 HOH HOH . N 9 HOH A 72 372 15 HOH HOH . N 9 HOH A 73 373 8 HOH HOH . N 9 HOH A 74 374 16 HOH HOH . N 9 HOH A 75 375 116 HOH HOH . N 9 HOH A 76 376 125 HOH HOH . N 9 HOH A 77 377 31 HOH HOH . N 9 HOH A 78 378 36 HOH HOH . N 9 HOH A 79 379 87 HOH HOH . N 9 HOH A 80 380 129 HOH HOH . N 9 HOH A 81 381 46 HOH HOH . N 9 HOH A 82 382 93 HOH HOH . N 9 HOH A 83 383 38 HOH HOH . N 9 HOH A 84 384 68 HOH HOH . N 9 HOH A 85 385 104 HOH HOH . N 9 HOH A 86 386 141 HOH HOH . N 9 HOH A 87 387 67 HOH HOH . N 9 HOH A 88 388 77 HOH HOH . N 9 HOH A 89 389 92 HOH HOH . N 9 HOH A 90 390 26 HOH HOH . N 9 HOH A 91 391 119 HOH HOH . N 9 HOH A 92 392 175 HOH HOH . N 9 HOH A 93 393 24 HOH HOH . N 9 HOH A 94 394 37 HOH HOH . N 9 HOH A 95 395 147 HOH HOH . N 9 HOH A 96 396 63 HOH HOH . N 9 HOH A 97 397 106 HOH HOH . N 9 HOH A 98 398 48 HOH HOH . N 9 HOH A 99 399 44 HOH HOH . N 9 HOH A 100 400 4 HOH HOH . N 9 HOH A 101 401 72 HOH HOH . N 9 HOH A 102 402 9 HOH HOH . N 9 HOH A 103 403 111 HOH HOH . N 9 HOH A 104 404 130 HOH HOH . N 9 HOH A 105 405 79 HOH HOH . N 9 HOH A 106 406 78 HOH HOH . N 9 HOH A 107 407 84 HOH HOH . N 9 HOH A 108 408 176 HOH HOH . N 9 HOH A 109 409 83 HOH HOH . N 9 HOH A 110 410 132 HOH HOH . N 9 HOH A 111 411 139 HOH HOH . N 9 HOH A 112 412 131 HOH HOH . N 9 HOH A 113 413 98 HOH HOH . N 9 HOH A 114 414 42 HOH HOH . N 9 HOH A 115 415 27 HOH HOH . N 9 HOH A 116 416 167 HOH HOH . N 9 HOH A 117 417 12 HOH HOH . N 9 HOH A 118 418 43 HOH HOH . N 9 HOH A 119 419 40 HOH HOH . N 9 HOH A 120 420 168 HOH HOH . N 9 HOH A 121 421 35 HOH HOH . N 9 HOH A 122 422 19 HOH HOH . N 9 HOH A 123 423 96 HOH HOH . N 9 HOH A 124 424 28 HOH HOH . N 9 HOH A 125 425 52 HOH HOH . N 9 HOH A 126 426 123 HOH HOH . N 9 HOH A 127 427 166 HOH HOH . N 9 HOH A 128 428 56 HOH HOH . N 9 HOH A 129 429 143 HOH HOH . N 9 HOH A 130 430 13 HOH HOH . N 9 HOH A 131 431 1 HOH HOH . N 9 HOH A 132 432 88 HOH HOH . N 9 HOH A 133 433 163 HOH HOH . N 9 HOH A 134 434 112 HOH HOH . N 9 HOH A 135 435 164 HOH HOH . N 9 HOH A 136 436 184 HOH HOH . N 9 HOH A 137 437 149 HOH HOH . N 9 HOH A 138 438 152 HOH HOH . N 9 HOH A 139 439 162 HOH HOH . N 9 HOH A 140 440 62 HOH HOH . N 9 HOH A 141 441 55 HOH HOH . N 9 HOH A 142 442 169 HOH HOH . N 9 HOH A 143 443 117 HOH HOH . N 9 HOH A 144 444 148 HOH HOH . N 9 HOH A 145 445 59 HOH HOH . N 9 HOH A 146 446 86 HOH HOH . N 9 HOH A 147 447 90 HOH HOH . N 9 HOH A 148 448 60 HOH HOH . N 9 HOH A 149 449 156 HOH HOH . N 9 HOH A 150 450 122 HOH HOH . N 9 HOH A 151 451 157 HOH HOH . N 9 HOH A 152 452 47 HOH HOH . N 9 HOH A 153 453 53 HOH HOH . N 9 HOH A 154 454 140 HOH HOH . N 9 HOH A 155 455 128 HOH HOH . N 9 HOH A 156 456 150 HOH HOH . N 9 HOH A 157 457 146 HOH HOH . N 9 HOH A 158 458 151 HOH HOH . N 9 HOH A 159 459 126 HOH HOH . N 9 HOH A 160 460 134 HOH HOH . N 9 HOH A 161 461 172 HOH HOH . N 9 HOH A 162 462 81 HOH HOH . N 9 HOH A 163 463 142 HOH HOH . N 9 HOH A 164 464 127 HOH HOH . N 9 HOH A 165 465 74 HOH HOH . N 9 HOH A 166 466 183 HOH HOH . N 9 HOH A 167 467 185 HOH HOH . N 9 HOH A 168 468 69 HOH HOH . N 9 HOH A 169 469 95 HOH HOH . N 9 HOH A 170 470 3 HOH HOH . N 9 HOH A 171 471 105 HOH HOH . N 9 HOH A 172 472 64 HOH HOH . N 9 HOH A 173 473 186 HOH HOH . N 9 HOH A 174 474 7 HOH HOH . N 9 HOH A 175 475 85 HOH HOH . N 9 HOH A 176 476 50 HOH HOH . N 9 HOH A 177 477 102 HOH HOH . N 9 HOH A 178 478 118 HOH HOH . N 9 HOH A 179 479 174 HOH HOH . N 9 HOH A 180 480 173 HOH HOH . N 9 HOH A 181 481 115 HOH HOH . N 9 HOH A 182 482 103 HOH HOH . N 9 HOH A 183 483 17 HOH HOH . N 9 HOH A 184 484 10 HOH HOH . N 9 HOH A 185 485 155 HOH HOH . N 9 HOH A 186 486 138 HOH HOH . N 9 HOH A 187 487 153 HOH HOH . N 9 HOH A 188 488 181 HOH HOH . N 9 HOH A 189 489 170 HOH HOH . N 9 HOH A 190 490 160 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 23.299 _atom_site.Cartn_y 16.357 _atom_site.Cartn_z 4.419 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #