data_7NUH # _model_server_result.job_id m7y-xBJ0yi_vQQt5H1mN1A _model_server_result.datetime_utc '2024-10-15 12:17:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nuh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 7NUH # _exptl.entry_id 7NUH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7NUH _cell.length_a 73.967 _cell.length_b 73.967 _cell.length_c 127.575 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 44 A HIS 41 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc2 A OE1 GLU 64 A GLU 80 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc3 A OE1 GLU 64 A GLU 80 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? metalc ? metalc4 A OD2 ASP 92 A ASP 108 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc5 A OD1 ASP 92 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc6 A OD1 ASP 92 A ASP 108 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc7 A OE2 GLU 103 A GLU 119 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc8 A O ILE 104 A ILE 120 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc9 B MN MN . A MN 201 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc10 B MN MN . A MN 201 1_555 K O11 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc11 C MN MN . A MN 202 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc12 C MN MN . A MN 202 1_555 L O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc13 C MN MN . A MN 202 1_555 L O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc14 C MN MN . A MN 202 1_555 L O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc15 D MG MG . A MG 203 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc16 D MG MG . A MG 203 1_555 L O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc17 D MG MG . A MG 203 1_555 L O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc18 D MG MG . A MG 203 1_555 L O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7NUH _atom_sites.fract_transf_matrix[1][1] 0.01352 _atom_sites.fract_transf_matrix[1][2] 0.007806 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 201 1 MN MN . C 2 MN A 1 202 2 MN MN . D 3 MG A 1 203 3 MG MG . E 4 PEG A 1 204 1 PEG PEG . F 4 PEG A 1 205 2 PEG PEG . G 5 EDO A 1 206 3 EDO EDO . H 5 EDO A 1 207 4 EDO EDO . I 5 EDO A 1 208 5 EDO EDO . J 5 EDO A 1 209 6 EDO EDO . K 6 USE A 1 210 1 USE LIG . L 7 HOH A 1 301 65 HOH HOH . L 7 HOH A 2 302 143 HOH HOH . L 7 HOH A 3 303 87 HOH HOH . L 7 HOH A 4 304 189 HOH HOH . L 7 HOH A 5 305 124 HOH HOH . L 7 HOH A 6 306 179 HOH HOH . L 7 HOH A 7 307 49 HOH HOH . L 7 HOH A 8 308 177 HOH HOH . L 7 HOH A 9 309 108 HOH HOH . L 7 HOH A 10 310 121 HOH HOH . L 7 HOH A 11 311 188 HOH HOH . L 7 HOH A 12 312 51 HOH HOH . L 7 HOH A 13 313 39 HOH HOH . L 7 HOH A 14 314 89 HOH HOH . L 7 HOH A 15 315 25 HOH HOH . L 7 HOH A 16 316 57 HOH HOH . L 7 HOH A 17 317 28 HOH HOH . L 7 HOH A 18 318 97 HOH HOH . L 7 HOH A 19 319 178 HOH HOH . L 7 HOH A 20 320 16 HOH HOH . L 7 HOH A 21 321 78 HOH HOH . L 7 HOH A 22 322 176 HOH HOH . L 7 HOH A 23 323 20 HOH HOH . L 7 HOH A 24 324 129 HOH HOH . L 7 HOH A 25 325 107 HOH HOH . L 7 HOH A 26 326 165 HOH HOH . L 7 HOH A 27 327 109 HOH HOH . L 7 HOH A 28 328 29 HOH HOH . L 7 HOH A 29 329 5 HOH HOH . L 7 HOH A 30 330 36 HOH HOH . L 7 HOH A 31 331 68 HOH HOH . L 7 HOH A 32 332 113 HOH HOH . L 7 HOH A 33 333 181 HOH HOH . L 7 HOH A 34 334 106 HOH HOH . L 7 HOH A 35 335 120 HOH HOH . L 7 HOH A 36 336 60 HOH HOH . L 7 HOH A 37 337 151 HOH HOH . L 7 HOH A 38 338 76 HOH HOH . L 7 HOH A 39 339 4 HOH HOH . L 7 HOH A 40 340 193 HOH HOH . L 7 HOH A 41 341 34 HOH HOH . L 7 HOH A 42 342 41 HOH HOH . L 7 HOH A 43 343 99 HOH HOH . L 7 HOH A 44 344 38 HOH HOH . L 7 HOH A 45 345 45 HOH HOH . L 7 HOH A 46 346 110 HOH HOH . L 7 HOH A 47 347 83 HOH HOH . L 7 HOH A 48 348 30 HOH HOH . L 7 HOH A 49 349 31 HOH HOH . L 7 HOH A 50 350 111 HOH HOH . L 7 HOH A 51 351 66 HOH HOH . L 7 HOH A 52 352 133 HOH HOH . L 7 HOH A 53 353 131 HOH HOH . L 7 HOH A 54 354 22 HOH HOH . L 7 HOH A 55 355 18 HOH HOH . L 7 HOH A 56 356 119 HOH HOH . L 7 HOH A 57 357 104 HOH HOH . L 7 HOH A 58 358 190 HOH HOH . L 7 HOH A 59 359 164 HOH HOH . L 7 HOH A 60 360 54 HOH HOH . L 7 HOH A 61 361 93 HOH HOH . L 7 HOH A 62 362 157 HOH HOH . L 7 HOH A 63 363 32 HOH HOH . L 7 HOH A 64 364 71 HOH HOH . L 7 HOH A 65 365 84 HOH HOH . L 7 HOH A 66 366 14 HOH HOH . L 7 HOH A 67 367 37 HOH HOH . L 7 HOH A 68 368 11 HOH HOH . L 7 HOH A 69 369 56 HOH HOH . L 7 HOH A 70 370 23 HOH HOH . L 7 HOH A 71 371 142 HOH HOH . L 7 HOH A 72 372 160 HOH HOH . L 7 HOH A 73 373 67 HOH HOH . L 7 HOH A 74 374 81 HOH HOH . L 7 HOH A 75 375 70 HOH HOH . L 7 HOH A 76 376 128 HOH HOH . L 7 HOH A 77 377 26 HOH HOH . L 7 HOH A 78 378 174 HOH HOH . L 7 HOH A 79 379 43 HOH HOH . L 7 HOH A 80 380 21 HOH HOH . L 7 HOH A 81 381 48 HOH HOH . L 7 HOH A 82 382 42 HOH HOH . L 7 HOH A 83 383 46 HOH HOH . L 7 HOH A 84 384 73 HOH HOH . L 7 HOH A 85 385 27 HOH HOH . L 7 HOH A 86 386 96 HOH HOH . L 7 HOH A 87 387 171 HOH HOH . L 7 HOH A 88 388 52 HOH HOH . L 7 HOH A 89 389 175 HOH HOH . L 7 HOH A 90 390 136 HOH HOH . L 7 HOH A 91 391 82 HOH HOH . L 7 HOH A 92 392 144 HOH HOH . L 7 HOH A 93 393 153 HOH HOH . L 7 HOH A 94 394 135 HOH HOH . L 7 HOH A 95 395 91 HOH HOH . L 7 HOH A 96 396 8 HOH HOH . L 7 HOH A 97 397 19 HOH HOH . L 7 HOH A 98 398 12 HOH HOH . L 7 HOH A 99 399 94 HOH HOH . L 7 HOH A 100 400 141 HOH HOH . L 7 HOH A 101 401 98 HOH HOH . L 7 HOH A 102 402 2 HOH HOH . L 7 HOH A 103 403 132 HOH HOH . L 7 HOH A 104 404 80 HOH HOH . L 7 HOH A 105 405 44 HOH HOH . L 7 HOH A 106 406 170 HOH HOH . L 7 HOH A 107 407 24 HOH HOH . L 7 HOH A 108 408 13 HOH HOH . L 7 HOH A 109 409 167 HOH HOH . L 7 HOH A 110 410 123 HOH HOH . L 7 HOH A 111 411 40 HOH HOH . L 7 HOH A 112 412 63 HOH HOH . L 7 HOH A 113 413 114 HOH HOH . L 7 HOH A 114 414 62 HOH HOH . L 7 HOH A 115 415 9 HOH HOH . L 7 HOH A 116 416 130 HOH HOH . L 7 HOH A 117 417 186 HOH HOH . L 7 HOH A 118 418 72 HOH HOH . L 7 HOH A 119 419 53 HOH HOH . L 7 HOH A 120 420 79 HOH HOH . L 7 HOH A 121 421 75 HOH HOH . L 7 HOH A 122 422 116 HOH HOH . L 7 HOH A 123 423 148 HOH HOH . L 7 HOH A 124 424 162 HOH HOH . L 7 HOH A 125 425 122 HOH HOH . L 7 HOH A 126 426 147 HOH HOH . L 7 HOH A 127 427 90 HOH HOH . L 7 HOH A 128 428 146 HOH HOH . L 7 HOH A 129 429 95 HOH HOH . L 7 HOH A 130 430 55 HOH HOH . L 7 HOH A 131 431 35 HOH HOH . L 7 HOH A 132 432 6 HOH HOH . L 7 HOH A 133 433 187 HOH HOH . L 7 HOH A 134 434 86 HOH HOH . L 7 HOH A 135 435 185 HOH HOH . L 7 HOH A 136 436 47 HOH HOH . L 7 HOH A 137 437 149 HOH HOH . L 7 HOH A 138 438 150 HOH HOH . L 7 HOH A 139 439 168 HOH HOH . L 7 HOH A 140 440 101 HOH HOH . L 7 HOH A 141 441 184 HOH HOH . L 7 HOH A 142 442 59 HOH HOH . L 7 HOH A 143 443 1 HOH HOH . L 7 HOH A 144 444 145 HOH HOH . L 7 HOH A 145 445 61 HOH HOH . L 7 HOH A 146 446 192 HOH HOH . L 7 HOH A 147 447 125 HOH HOH . L 7 HOH A 148 448 117 HOH HOH . L 7 HOH A 149 449 161 HOH HOH . L 7 HOH A 150 450 134 HOH HOH . L 7 HOH A 151 451 126 HOH HOH . L 7 HOH A 152 452 88 HOH HOH . L 7 HOH A 153 453 77 HOH HOH . L 7 HOH A 154 454 15 HOH HOH . L 7 HOH A 155 455 127 HOH HOH . L 7 HOH A 156 456 163 HOH HOH . L 7 HOH A 157 457 58 HOH HOH . L 7 HOH A 158 458 100 HOH HOH . L 7 HOH A 159 459 156 HOH HOH . L 7 HOH A 160 460 33 HOH HOH . L 7 HOH A 161 461 182 HOH HOH . L 7 HOH A 162 462 69 HOH HOH . L 7 HOH A 163 463 103 HOH HOH . L 7 HOH A 164 464 7 HOH HOH . L 7 HOH A 165 465 166 HOH HOH . L 7 HOH A 166 466 50 HOH HOH . L 7 HOH A 167 467 74 HOH HOH . L 7 HOH A 168 468 92 HOH HOH . L 7 HOH A 169 469 183 HOH HOH . L 7 HOH A 170 470 194 HOH HOH . L 7 HOH A 171 471 158 HOH HOH . L 7 HOH A 172 472 155 HOH HOH . L 7 HOH A 173 473 112 HOH HOH . L 7 HOH A 174 474 191 HOH HOH . L 7 HOH A 175 475 3 HOH HOH . L 7 HOH A 176 476 105 HOH HOH . L 7 HOH A 177 477 154 HOH HOH . L 7 HOH A 178 478 17 HOH HOH . L 7 HOH A 179 479 139 HOH HOH . L 7 HOH A 180 480 85 HOH HOH . L 7 HOH A 181 481 118 HOH HOH . L 7 HOH A 182 482 64 HOH HOH . L 7 HOH A 183 483 115 HOH HOH . L 7 HOH A 184 484 173 HOH HOH . L 7 HOH A 185 485 137 HOH HOH . L 7 HOH A 186 486 10 HOH HOH . L 7 HOH A 187 487 102 HOH HOH . L 7 HOH A 188 488 152 HOH HOH . L 7 HOH A 189 489 180 HOH HOH . L 7 HOH A 190 490 172 HOH HOH . L 7 HOH A 191 491 169 HOH HOH . L 7 HOH A 192 492 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 5 32.525 15.727 5.743 1 63.84 ? C1 EDO 207 A 1 HETATM 2 O O1 EDO . . . H 5 33.719 16.268 6.29 1 69.88 ? O1 EDO 207 A 1 HETATM 3 C C2 EDO . . . H 5 31.515 16.757 5.418 1 60.5 ? C2 EDO 207 A 1 HETATM 4 O O2 EDO . . . H 5 31.184 16.799 4.054 1 62.15 ? O2 EDO 207 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #