data_7NUH
#
_model_server_result.job_id            nA4I6KzON_RuEZnKdWAjvw 
_model_server_result.datetime_utc      '2024-11-30 02:53:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7nuh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":208}' 
#
_entry.id    7NUH 
#
_exptl.entry_id    7NUH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7NUH 
_cell.length_a            73.967 
_cell.length_b            73.967 
_cell.length_c            127.575 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NUH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 44 A HIS 41 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc2 A OE1 GLU 64 A GLU 80 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc3 A OE1 GLU 64 A GLU 80 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? 
metalc ? metalc4 A OD2 ASP 92 A ASP 108 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc5 A OD1 ASP 92 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc6 A OD1 ASP 92 A ASP 108 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? 
metalc ? metalc7 A OE2 GLU 103 A GLU 119 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc8 A O ILE 104 A ILE 120 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc9 B MN MN . A MN 201 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc10 B MN MN . A MN 201 1_555 K O11 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc11 C MN MN . A MN 202 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc12 C MN MN . A MN 202 1_555 L O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc13 C MN MN . A MN 202 1_555 L O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
metalc ? metalc14 C MN MN . A MN 202 1_555 L O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc15 D MG MG . A MG 203 1_555 K O10 USE . A USE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc16 D MG MG . A MG 203 1_555 L O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? 
metalc ? metalc17 D MG MG . A MG 203 1_555 L O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc18 D MG MG . A MG 203 1_555 L O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7NUH 
_atom_sites.fract_transf_matrix[1][1]    0.01352 
_atom_sites.fract_transf_matrix[1][2]    0.007806 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015611 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007839 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 201 1 MN MN . 
C 2 MN A 1 202 2 MN MN . 
D 3 MG A 1 203 3 MG MG . 
E 4 PEG A 1 204 1 PEG PEG . 
F 4 PEG A 1 205 2 PEG PEG . 
G 5 EDO A 1 206 3 EDO EDO . 
H 5 EDO A 1 207 4 EDO EDO . 
I 5 EDO A 1 208 5 EDO EDO . 
J 5 EDO A 1 209 6 EDO EDO . 
K 6 USE A 1 210 1 USE LIG . 
L 7 HOH A 1 301 65 HOH HOH . 
L 7 HOH A 2 302 143 HOH HOH . 
L 7 HOH A 3 303 87 HOH HOH . 
L 7 HOH A 4 304 189 HOH HOH . 
L 7 HOH A 5 305 124 HOH HOH . 
L 7 HOH A 6 306 179 HOH HOH . 
L 7 HOH A 7 307 49 HOH HOH . 
L 7 HOH A 8 308 177 HOH HOH . 
L 7 HOH A 9 309 108 HOH HOH . 
L 7 HOH A 10 310 121 HOH HOH . 
L 7 HOH A 11 311 188 HOH HOH . 
L 7 HOH A 12 312 51 HOH HOH . 
L 7 HOH A 13 313 39 HOH HOH . 
L 7 HOH A 14 314 89 HOH HOH . 
L 7 HOH A 15 315 25 HOH HOH . 
L 7 HOH A 16 316 57 HOH HOH . 
L 7 HOH A 17 317 28 HOH HOH . 
L 7 HOH A 18 318 97 HOH HOH . 
L 7 HOH A 19 319 178 HOH HOH . 
L 7 HOH A 20 320 16 HOH HOH . 
L 7 HOH A 21 321 78 HOH HOH . 
L 7 HOH A 22 322 176 HOH HOH . 
L 7 HOH A 23 323 20 HOH HOH . 
L 7 HOH A 24 324 129 HOH HOH . 
L 7 HOH A 25 325 107 HOH HOH . 
L 7 HOH A 26 326 165 HOH HOH . 
L 7 HOH A 27 327 109 HOH HOH . 
L 7 HOH A 28 328 29 HOH HOH . 
L 7 HOH A 29 329 5 HOH HOH . 
L 7 HOH A 30 330 36 HOH HOH . 
L 7 HOH A 31 331 68 HOH HOH . 
L 7 HOH A 32 332 113 HOH HOH . 
L 7 HOH A 33 333 181 HOH HOH . 
L 7 HOH A 34 334 106 HOH HOH . 
L 7 HOH A 35 335 120 HOH HOH . 
L 7 HOH A 36 336 60 HOH HOH . 
L 7 HOH A 37 337 151 HOH HOH . 
L 7 HOH A 38 338 76 HOH HOH . 
L 7 HOH A 39 339 4 HOH HOH . 
L 7 HOH A 40 340 193 HOH HOH . 
L 7 HOH A 41 341 34 HOH HOH . 
L 7 HOH A 42 342 41 HOH HOH . 
L 7 HOH A 43 343 99 HOH HOH . 
L 7 HOH A 44 344 38 HOH HOH . 
L 7 HOH A 45 345 45 HOH HOH . 
L 7 HOH A 46 346 110 HOH HOH . 
L 7 HOH A 47 347 83 HOH HOH . 
L 7 HOH A 48 348 30 HOH HOH . 
L 7 HOH A 49 349 31 HOH HOH . 
L 7 HOH A 50 350 111 HOH HOH . 
L 7 HOH A 51 351 66 HOH HOH . 
L 7 HOH A 52 352 133 HOH HOH . 
L 7 HOH A 53 353 131 HOH HOH . 
L 7 HOH A 54 354 22 HOH HOH . 
L 7 HOH A 55 355 18 HOH HOH . 
L 7 HOH A 56 356 119 HOH HOH . 
L 7 HOH A 57 357 104 HOH HOH . 
L 7 HOH A 58 358 190 HOH HOH . 
L 7 HOH A 59 359 164 HOH HOH . 
L 7 HOH A 60 360 54 HOH HOH . 
L 7 HOH A 61 361 93 HOH HOH . 
L 7 HOH A 62 362 157 HOH HOH . 
L 7 HOH A 63 363 32 HOH HOH . 
L 7 HOH A 64 364 71 HOH HOH . 
L 7 HOH A 65 365 84 HOH HOH . 
L 7 HOH A 66 366 14 HOH HOH . 
L 7 HOH A 67 367 37 HOH HOH . 
L 7 HOH A 68 368 11 HOH HOH . 
L 7 HOH A 69 369 56 HOH HOH . 
L 7 HOH A 70 370 23 HOH HOH . 
L 7 HOH A 71 371 142 HOH HOH . 
L 7 HOH A 72 372 160 HOH HOH . 
L 7 HOH A 73 373 67 HOH HOH . 
L 7 HOH A 74 374 81 HOH HOH . 
L 7 HOH A 75 375 70 HOH HOH . 
L 7 HOH A 76 376 128 HOH HOH . 
L 7 HOH A 77 377 26 HOH HOH . 
L 7 HOH A 78 378 174 HOH HOH . 
L 7 HOH A 79 379 43 HOH HOH . 
L 7 HOH A 80 380 21 HOH HOH . 
L 7 HOH A 81 381 48 HOH HOH . 
L 7 HOH A 82 382 42 HOH HOH . 
L 7 HOH A 83 383 46 HOH HOH . 
L 7 HOH A 84 384 73 HOH HOH . 
L 7 HOH A 85 385 27 HOH HOH . 
L 7 HOH A 86 386 96 HOH HOH . 
L 7 HOH A 87 387 171 HOH HOH . 
L 7 HOH A 88 388 52 HOH HOH . 
L 7 HOH A 89 389 175 HOH HOH . 
L 7 HOH A 90 390 136 HOH HOH . 
L 7 HOH A 91 391 82 HOH HOH . 
L 7 HOH A 92 392 144 HOH HOH . 
L 7 HOH A 93 393 153 HOH HOH . 
L 7 HOH A 94 394 135 HOH HOH . 
L 7 HOH A 95 395 91 HOH HOH . 
L 7 HOH A 96 396 8 HOH HOH . 
L 7 HOH A 97 397 19 HOH HOH . 
L 7 HOH A 98 398 12 HOH HOH . 
L 7 HOH A 99 399 94 HOH HOH . 
L 7 HOH A 100 400 141 HOH HOH . 
L 7 HOH A 101 401 98 HOH HOH . 
L 7 HOH A 102 402 2 HOH HOH . 
L 7 HOH A 103 403 132 HOH HOH . 
L 7 HOH A 104 404 80 HOH HOH . 
L 7 HOH A 105 405 44 HOH HOH . 
L 7 HOH A 106 406 170 HOH HOH . 
L 7 HOH A 107 407 24 HOH HOH . 
L 7 HOH A 108 408 13 HOH HOH . 
L 7 HOH A 109 409 167 HOH HOH . 
L 7 HOH A 110 410 123 HOH HOH . 
L 7 HOH A 111 411 40 HOH HOH . 
L 7 HOH A 112 412 63 HOH HOH . 
L 7 HOH A 113 413 114 HOH HOH . 
L 7 HOH A 114 414 62 HOH HOH . 
L 7 HOH A 115 415 9 HOH HOH . 
L 7 HOH A 116 416 130 HOH HOH . 
L 7 HOH A 117 417 186 HOH HOH . 
L 7 HOH A 118 418 72 HOH HOH . 
L 7 HOH A 119 419 53 HOH HOH . 
L 7 HOH A 120 420 79 HOH HOH . 
L 7 HOH A 121 421 75 HOH HOH . 
L 7 HOH A 122 422 116 HOH HOH . 
L 7 HOH A 123 423 148 HOH HOH . 
L 7 HOH A 124 424 162 HOH HOH . 
L 7 HOH A 125 425 122 HOH HOH . 
L 7 HOH A 126 426 147 HOH HOH . 
L 7 HOH A 127 427 90 HOH HOH . 
L 7 HOH A 128 428 146 HOH HOH . 
L 7 HOH A 129 429 95 HOH HOH . 
L 7 HOH A 130 430 55 HOH HOH . 
L 7 HOH A 131 431 35 HOH HOH . 
L 7 HOH A 132 432 6 HOH HOH . 
L 7 HOH A 133 433 187 HOH HOH . 
L 7 HOH A 134 434 86 HOH HOH . 
L 7 HOH A 135 435 185 HOH HOH . 
L 7 HOH A 136 436 47 HOH HOH . 
L 7 HOH A 137 437 149 HOH HOH . 
L 7 HOH A 138 438 150 HOH HOH . 
L 7 HOH A 139 439 168 HOH HOH . 
L 7 HOH A 140 440 101 HOH HOH . 
L 7 HOH A 141 441 184 HOH HOH . 
L 7 HOH A 142 442 59 HOH HOH . 
L 7 HOH A 143 443 1 HOH HOH . 
L 7 HOH A 144 444 145 HOH HOH . 
L 7 HOH A 145 445 61 HOH HOH . 
L 7 HOH A 146 446 192 HOH HOH . 
L 7 HOH A 147 447 125 HOH HOH . 
L 7 HOH A 148 448 117 HOH HOH . 
L 7 HOH A 149 449 161 HOH HOH . 
L 7 HOH A 150 450 134 HOH HOH . 
L 7 HOH A 151 451 126 HOH HOH . 
L 7 HOH A 152 452 88 HOH HOH . 
L 7 HOH A 153 453 77 HOH HOH . 
L 7 HOH A 154 454 15 HOH HOH . 
L 7 HOH A 155 455 127 HOH HOH . 
L 7 HOH A 156 456 163 HOH HOH . 
L 7 HOH A 157 457 58 HOH HOH . 
L 7 HOH A 158 458 100 HOH HOH . 
L 7 HOH A 159 459 156 HOH HOH . 
L 7 HOH A 160 460 33 HOH HOH . 
L 7 HOH A 161 461 182 HOH HOH . 
L 7 HOH A 162 462 69 HOH HOH . 
L 7 HOH A 163 463 103 HOH HOH . 
L 7 HOH A 164 464 7 HOH HOH . 
L 7 HOH A 165 465 166 HOH HOH . 
L 7 HOH A 166 466 50 HOH HOH . 
L 7 HOH A 167 467 74 HOH HOH . 
L 7 HOH A 168 468 92 HOH HOH . 
L 7 HOH A 169 469 183 HOH HOH . 
L 7 HOH A 170 470 194 HOH HOH . 
L 7 HOH A 171 471 158 HOH HOH . 
L 7 HOH A 172 472 155 HOH HOH . 
L 7 HOH A 173 473 112 HOH HOH . 
L 7 HOH A 174 474 191 HOH HOH . 
L 7 HOH A 175 475 3 HOH HOH . 
L 7 HOH A 176 476 105 HOH HOH . 
L 7 HOH A 177 477 154 HOH HOH . 
L 7 HOH A 178 478 17 HOH HOH . 
L 7 HOH A 179 479 139 HOH HOH . 
L 7 HOH A 180 480 85 HOH HOH . 
L 7 HOH A 181 481 118 HOH HOH . 
L 7 HOH A 182 482 64 HOH HOH . 
L 7 HOH A 183 483 115 HOH HOH . 
L 7 HOH A 184 484 173 HOH HOH . 
L 7 HOH A 185 485 137 HOH HOH . 
L 7 HOH A 186 486 10 HOH HOH . 
L 7 HOH A 187 487 102 HOH HOH . 
L 7 HOH A 188 488 152 HOH HOH . 
L 7 HOH A 189 489 180 HOH HOH . 
L 7 HOH A 190 490 172 HOH HOH . 
L 7 HOH A 191 491 169 HOH HOH . 
L 7 HOH A 192 492 159 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 5 9.811 6.177 -9.807 0.5 55.42 ? C1 EDO 208 A 1 
HETATM 2 O O1 EDO . . . I 5 11.041 5.474 -9.75 0.5 57.42 ? O1 EDO 208 A 1 
HETATM 3 C C2 EDO . . . I 5 8.807 5.655 -8.852 0.5 54.41 ? C2 EDO 208 A 1 
HETATM 4 O O2 EDO . . . I 5 8.323 6.655 -7.984 0.5 53.27 ? O2 EDO 208 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#