data_7NWQ # _model_server_result.job_id XV4XHnGkvfoS6R9yYCjZNA _model_server_result.datetime_utc '2024-11-30 23:03:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":317}' # _entry.id 7NWQ # _exptl.entry_id 7NWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NWQ _cell.length_a 172.49 _cell.length_b 172.49 _cell.length_c 172.49 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 S N N ? 5 T N N ? 5 U N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 BGC BGC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BGC 1 BBB 1 BGC BBB 1 BGC 2 n B BGC 2 BBB 2 BGC BaB 2 BGC 2 n B BGC 3 BBB 3 BGC BbB 3 BGC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 BGC . BBB BGC 1 1_555 B C1 BGC . BBB BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 B C5 BGC . BBB BGC 1 1_555 B O4 BGC . BBB BGC 2 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 4.014 ? covale ? covale3 B C3 BGC . BBB BGC 1 1_555 B O5 BGC . BBB BGC 3 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.284 ? covale ? covale4 B C4 BGC . BBB BGC 1 1_555 B O5 BGC . BBB BGC 3 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.122 ? covale ? covale5 B C6 BGC . BBB BGC 1 1_555 B O3 BGC . BBB BGC 3 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? covale ? covale6 B O4 BGC . BBB BGC 1 1_555 B C2 BGC . BBB BGC 3 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? covale ? covale7 B O6 BGC . BBB BGC 1 1_555 B C2 BGC . BBB BGC 3 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? covale ? covale8 B C2 BGC . BBB BGC 2 1_555 B O4 BGC . BBB BGC 2 18_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale9 B O4 BGC . BBB BGC 2 1_555 B C1 BGC . BBB BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 sing metalc ? metalc1 A O VAL 31 AAA VAL 31 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc2 A OD1 ASP 33 AAA ASP 33 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc3 A O GLU 35 AAA GLU 35 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc4 A OD1 ASP 37 AAA ASP 37 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc5 A OD1 ASP 78 AAA ASP 78 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc6 A OD2 ASP 78 AAA ASP 78 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc7 A O VAL 80 AAA VAL 80 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc8 A OD1 ASP 92 AAA ASP 92 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc9 A OD2 ASP 92 AAA ASP 92 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc10 A OD1 ASP 99 AAA ASP 99 1_555 U CA CA . AAA CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc11 A OD2 ASP 103 AAA ASP 103 1_555 U CA CA . AAA CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc12 A OD1 ASP 111 AAA ASP 111 1_555 U CA CA . AAA CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc13 A OD2 ASP 111 AAA ASP 111 1_555 U CA CA . AAA CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc14 A OD1 ASP 112 AAA ASP 112 1_555 U CA CA . AAA CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc15 A OE1 GLU 147 AAA GLU 147 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc16 A OE2 GLU 147 AAA GLU 147 1_555 T CA CA . AAA CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc17 A OE1 GLU 170 AAA GLU 170 1_555 S CA CA . AAA CA 317 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc18 A O ALA 171 AAA ALA 171 1_555 S CA CA . AAA CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc19 S CA CA . AAA CA 317 1_555 Y O HOH . AAA HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc20 T CA CA . AAA CA 318 1_555 Y O HOH . AAA HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc21 U CA CA . AAA CA 319 1_555 Y O HOH . AAA HOH 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NWQ _atom_sites.fract_transf_matrix[1][1] 0.005797 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005797 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PEG AAA 1 301 2 PEG PEG . D 3 PEG AAA 1 302 6 PEG PEG . E 3 PEG AAA 1 303 7 PEG PEG . F 3 PEG AAA 1 304 8 PEG PEG . G 3 PEG AAA 1 305 9 PEG PEG . H 3 PEG AAA 1 306 10 PEG PEG . I 3 PEG AAA 1 307 11 PEG PEG . J 4 EDO AAA 1 308 16 EDO EDO . K 4 EDO AAA 1 309 17 EDO EDO . L 4 EDO AAA 1 310 20 EDO EDO . M 4 EDO AAA 1 311 21 EDO EDO . N 4 EDO AAA 1 312 22 EDO EDO . O 4 EDO AAA 1 313 23 EDO EDO . P 4 EDO AAA 1 314 24 EDO EDO . Q 4 EDO AAA 1 315 25 EDO EDO . R 4 EDO AAA 1 316 27 EDO EDO . S 5 CA AAA 1 317 1 CA CA . T 5 CA AAA 1 318 2 CA CA . U 5 CA AAA 1 319 3 CA CA . V 6 PGE AAA 1 320 1 PGE PGE . W 7 1PE AAA 1 321 2 1PE 1PE . X 6 PGE AAA 1 322 3 PGE PGE . Y 8 HOH AAA 1 401 73 HOH HOH . Y 8 HOH AAA 2 402 58 HOH HOH . Y 8 HOH AAA 3 403 107 HOH HOH . Y 8 HOH AAA 4 404 43 HOH HOH . Y 8 HOH AAA 5 405 68 HOH HOH . Y 8 HOH AAA 6 406 50 HOH HOH . Y 8 HOH AAA 7 407 95 HOH HOH . Y 8 HOH AAA 8 408 103 HOH HOH . Y 8 HOH AAA 9 409 19 HOH HOH . Y 8 HOH AAA 10 410 85 HOH HOH . Y 8 HOH AAA 11 411 94 HOH HOH . Y 8 HOH AAA 12 412 1 HOH HOH . Y 8 HOH AAA 13 413 34 HOH HOH . Y 8 HOH AAA 14 414 2 HOH HOH . Y 8 HOH AAA 15 415 29 HOH HOH . Y 8 HOH AAA 16 416 74 HOH HOH . Y 8 HOH AAA 17 417 15 HOH HOH . Y 8 HOH AAA 18 418 75 HOH HOH . Y 8 HOH AAA 19 419 21 HOH HOH . Y 8 HOH AAA 20 420 32 HOH HOH . Y 8 HOH AAA 21 421 16 HOH HOH . Y 8 HOH AAA 22 422 13 HOH HOH . Y 8 HOH AAA 23 423 81 HOH HOH . Y 8 HOH AAA 24 424 63 HOH HOH . Y 8 HOH AAA 25 425 55 HOH HOH . Y 8 HOH AAA 26 426 18 HOH HOH . Y 8 HOH AAA 27 427 72 HOH HOH . Y 8 HOH AAA 28 428 59 HOH HOH . Y 8 HOH AAA 29 429 97 HOH HOH . Y 8 HOH AAA 30 430 6 HOH HOH . Y 8 HOH AAA 31 431 7 HOH HOH . Y 8 HOH AAA 32 432 4 HOH HOH . Y 8 HOH AAA 33 433 9 HOH HOH . Y 8 HOH AAA 34 434 46 HOH HOH . Y 8 HOH AAA 35 435 47 HOH HOH . Y 8 HOH AAA 36 436 51 HOH HOH . Y 8 HOH AAA 37 437 8 HOH HOH . Y 8 HOH AAA 38 438 86 HOH HOH . Y 8 HOH AAA 39 439 76 HOH HOH . Y 8 HOH AAA 40 440 33 HOH HOH . Y 8 HOH AAA 41 441 110 HOH HOH . Y 8 HOH AAA 42 442 42 HOH HOH . Y 8 HOH AAA 43 443 84 HOH HOH . Y 8 HOH AAA 44 444 23 HOH HOH . Y 8 HOH AAA 45 445 93 HOH HOH . Y 8 HOH AAA 46 446 70 HOH HOH . Y 8 HOH AAA 47 447 5 HOH HOH . Y 8 HOH AAA 48 448 30 HOH HOH . Y 8 HOH AAA 49 449 89 HOH HOH . Y 8 HOH AAA 50 450 10 HOH HOH . Y 8 HOH AAA 51 451 38 HOH HOH . Y 8 HOH AAA 52 452 41 HOH HOH . Y 8 HOH AAA 53 453 54 HOH HOH . Y 8 HOH AAA 54 454 83 HOH HOH . Y 8 HOH AAA 55 455 61 HOH HOH . Y 8 HOH AAA 56 456 37 HOH HOH . Y 8 HOH AAA 57 457 102 HOH HOH . Y 8 HOH AAA 58 458 26 HOH HOH . Y 8 HOH AAA 59 459 57 HOH HOH . Y 8 HOH AAA 60 460 39 HOH HOH . Y 8 HOH AAA 61 461 27 HOH HOH . Y 8 HOH AAA 62 462 80 HOH HOH . Y 8 HOH AAA 63 463 17 HOH HOH . Y 8 HOH AAA 64 464 109 HOH HOH . Y 8 HOH AAA 65 465 28 HOH HOH . Y 8 HOH AAA 66 466 40 HOH HOH . Y 8 HOH AAA 67 467 78 HOH HOH . Y 8 HOH AAA 68 468 77 HOH HOH . Y 8 HOH AAA 69 469 45 HOH HOH . Y 8 HOH AAA 70 470 20 HOH HOH . Y 8 HOH AAA 71 471 12 HOH HOH . Y 8 HOH AAA 72 472 24 HOH HOH . Y 8 HOH AAA 73 473 3 HOH HOH . Y 8 HOH AAA 74 474 108 HOH HOH . Y 8 HOH AAA 75 475 22 HOH HOH . Y 8 HOH AAA 76 476 14 HOH HOH . Y 8 HOH AAA 77 477 48 HOH HOH . Y 8 HOH AAA 78 478 11 HOH HOH . Y 8 HOH AAA 79 479 31 HOH HOH . Y 8 HOH AAA 80 480 99 HOH HOH . Y 8 HOH AAA 81 481 98 HOH HOH . Y 8 HOH AAA 82 482 36 HOH HOH . Y 8 HOH AAA 83 483 62 HOH HOH . Y 8 HOH AAA 84 484 53 HOH HOH . Y 8 HOH AAA 85 485 56 HOH HOH . Y 8 HOH AAA 86 486 105 HOH HOH . Y 8 HOH AAA 87 487 49 HOH HOH . Y 8 HOH AAA 88 488 25 HOH HOH . Y 8 HOH AAA 89 489 66 HOH HOH . Y 8 HOH AAA 90 490 100 HOH HOH . Y 8 HOH AAA 91 491 87 HOH HOH . Y 8 HOH AAA 92 492 69 HOH HOH . Y 8 HOH AAA 93 493 65 HOH HOH . Y 8 HOH AAA 94 494 64 HOH HOH . Y 8 HOH AAA 95 495 52 HOH HOH . Y 8 HOH AAA 96 496 60 HOH HOH . Y 8 HOH AAA 97 497 44 HOH HOH . Y 8 HOH AAA 98 498 96 HOH HOH . Y 8 HOH AAA 99 499 92 HOH HOH . Y 8 HOH AAA 100 500 111 HOH HOH . Y 8 HOH AAA 101 501 104 HOH HOH . Y 8 HOH AAA 102 502 88 HOH HOH . Y 8 HOH AAA 103 503 71 HOH HOH . Y 8 HOH AAA 104 504 67 HOH HOH . Y 8 HOH AAA 105 505 90 HOH HOH . Y 8 HOH AAA 106 506 106 HOH HOH . Y 8 HOH AAA 107 507 79 HOH HOH . Y 8 HOH AAA 108 508 35 HOH HOH . Y 8 HOH AAA 109 509 101 HOH HOH . Y 8 HOH AAA 110 510 82 HOH HOH . Y 8 HOH AAA 111 511 91 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id S _atom_site.label_entity_id 5 _atom_site.Cartn_x 72.612 _atom_site.Cartn_y 50.339 _atom_site.Cartn_z 36.419 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.9 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 317 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 1034 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #