data_7NX1 # _model_server_result.job_id sFPaTdItLm_mju6MeSsD1Q _model_server_result.datetime_utc '2025-04-28 03:30:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nx1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7NX1 # _exptl.entry_id 7NX1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 158.925 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TERBIUM(III) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.284 _cell.angle_gamma 90 _cell.entry_id 7NX1 _cell.length_a 55.04 _cell.length_b 54.46 _cell.length_c 55.01 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NX1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 73 1_555 A SG CYS 24 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf2 A SG CYS 106 A CYS 168 1_555 A SG CYS 117 A CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf3 A SG CYS 238 A CYS 300 1_555 A SG CYS 260 A CYS 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc1 A OD2 ASP 273 A ASP 335 1_555 E TB TB . A TB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A OE1 GLU 285 A GLU 347 1_555 E TB TB . A TB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc3 A OE2 GLU 285 A GLU 347 1_555 E TB TB . A TB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc4 A OD2 ASP 319 A ASP 381 1_555 B TB TB . A TB 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 A OE2 GLU 320 A GLU 382 1_555 B TB TB . A TB 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc6 B TB TB . A TB 401 1_555 F O4 BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc7 B TB TB . A TB 401 1_555 G N BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc8 B TB TB . A TB 401 1_555 G O8 BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc9 B TB TB . A TB 401 1_555 G O1 BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc10 B TB TB . A TB 401 1_555 G O3 BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc11 B TB TB . A TB 401 1_555 G O6 BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc12 C TB TB . A TB 402 1_555 F O6 BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc13 C TB TB . A TB 402 1_555 F N BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc14 C TB TB . A TB 402 1_555 F O8 BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc15 C TB TB . A TB 402 1_555 F O3 BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc16 C TB TB . A TB 402 1_555 F O4 BTB . A BTB 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc17 C TB TB . A TB 402 1_555 G O3 BTB . A BTB 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc18 D TB TB . A TB 403 1_555 H O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc19 D TB TB . A TB 403 1_555 H O HOH . A HOH 546 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc20 D TB TB . A TB 403 1_555 H O HOH . A HOH 638 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc21 D TB TB . A TB 403 1_555 H O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc22 D TB TB . A TB 403 1_555 H O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc23 D TB TB . A TB 403 1_555 H O HOH . A HOH 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc24 E TB TB . A TB 404 1_555 H O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc25 E TB TB . A TB 404 1_555 H O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'Tb 3' _chem_comp.formula_weight 158.925 _chem_comp.id TB _chem_comp.mon_nstd_flag . _chem_comp.name 'TERBIUM(III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NX1 _atom_sites.fract_transf_matrix[1][1] 0.018169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007078 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019509 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TB A 1 401 1 TB TB . C 2 TB A 1 402 2 TB TB . D 2 TB A 1 403 3 TB TB . E 2 TB A 1 404 4 TB TB . F 3 BTB A 1 405 1 BTB BTB . G 3 BTB A 1 406 2 BTB BTB . H 4 HOH A 1 501 54 HOH HOH . H 4 HOH A 2 502 230 HOH HOH . H 4 HOH A 3 503 69 HOH HOH . H 4 HOH A 4 504 117 HOH HOH . H 4 HOH A 5 505 88 HOH HOH . H 4 HOH A 6 506 113 HOH HOH . H 4 HOH A 7 507 107 HOH HOH . H 4 HOH A 8 508 61 HOH HOH . H 4 HOH A 9 509 220 HOH HOH . H 4 HOH A 10 510 87 HOH HOH . H 4 HOH A 11 511 112 HOH HOH . H 4 HOH A 12 512 201 HOH HOH . H 4 HOH A 13 513 118 HOH HOH . H 4 HOH A 14 514 67 HOH HOH . H 4 HOH A 15 515 11 HOH HOH . H 4 HOH A 16 516 74 HOH HOH . H 4 HOH A 17 517 149 HOH HOH . H 4 HOH A 18 518 86 HOH HOH . H 4 HOH A 19 519 120 HOH HOH . H 4 HOH A 20 520 63 HOH HOH . H 4 HOH A 21 521 78 HOH HOH . H 4 HOH A 22 522 171 HOH HOH . H 4 HOH A 23 523 65 HOH HOH . H 4 HOH A 24 524 24 HOH HOH . H 4 HOH A 25 525 143 HOH HOH . H 4 HOH A 26 526 9 HOH HOH . H 4 HOH A 27 527 80 HOH HOH . H 4 HOH A 28 528 38 HOH HOH . H 4 HOH A 29 529 71 HOH HOH . H 4 HOH A 30 530 90 HOH HOH . H 4 HOH A 31 531 59 HOH HOH . H 4 HOH A 32 532 159 HOH HOH . H 4 HOH A 33 533 205 HOH HOH . H 4 HOH A 34 534 2 HOH HOH . H 4 HOH A 35 535 178 HOH HOH . H 4 HOH A 36 536 57 HOH HOH . H 4 HOH A 37 537 15 HOH HOH . H 4 HOH A 38 538 3 HOH HOH . H 4 HOH A 39 539 52 HOH HOH . H 4 HOH A 40 540 235 HOH HOH . H 4 HOH A 41 541 47 HOH HOH . H 4 HOH A 42 542 55 HOH HOH . H 4 HOH A 43 543 81 HOH HOH . H 4 HOH A 44 544 28 HOH HOH . H 4 HOH A 45 545 68 HOH HOH . H 4 HOH A 46 546 98 HOH HOH . H 4 HOH A 47 547 33 HOH HOH . H 4 HOH A 48 548 12 HOH HOH . H 4 HOH A 49 549 17 HOH HOH . H 4 HOH A 50 550 21 HOH HOH . H 4 HOH A 51 551 20 HOH HOH . H 4 HOH A 52 552 6 HOH HOH . H 4 HOH A 53 553 10 HOH HOH . H 4 HOH A 54 554 35 HOH HOH . H 4 HOH A 55 555 39 HOH HOH . H 4 HOH A 56 556 26 HOH HOH . H 4 HOH A 57 557 1 HOH HOH . H 4 HOH A 58 558 208 HOH HOH . H 4 HOH A 59 559 176 HOH HOH . H 4 HOH A 60 560 18 HOH HOH . H 4 HOH A 61 561 45 HOH HOH . H 4 HOH A 62 562 32 HOH HOH . H 4 HOH A 63 563 181 HOH HOH . H 4 HOH A 64 564 99 HOH HOH . H 4 HOH A 65 565 108 HOH HOH . H 4 HOH A 66 566 84 HOH HOH . H 4 HOH A 67 567 125 HOH HOH . H 4 HOH A 68 568 116 HOH HOH . H 4 HOH A 69 569 60 HOH HOH . H 4 HOH A 70 570 22 HOH HOH . H 4 HOH A 71 571 31 HOH HOH . H 4 HOH A 72 572 58 HOH HOH . H 4 HOH A 73 573 95 HOH HOH . H 4 HOH A 74 574 42 HOH HOH . H 4 HOH A 75 575 140 HOH HOH . H 4 HOH A 76 576 114 HOH HOH . H 4 HOH A 77 577 157 HOH HOH . H 4 HOH A 78 578 110 HOH HOH . H 4 HOH A 79 579 23 HOH HOH . H 4 HOH A 80 580 127 HOH HOH . H 4 HOH A 81 581 83 HOH HOH . H 4 HOH A 82 582 89 HOH HOH . H 4 HOH A 83 583 162 HOH HOH . H 4 HOH A 84 584 85 HOH HOH . H 4 HOH A 85 585 56 HOH HOH . H 4 HOH A 86 586 168 HOH HOH . H 4 HOH A 87 587 16 HOH HOH . H 4 HOH A 88 588 14 HOH HOH . H 4 HOH A 89 589 37 HOH HOH . H 4 HOH A 90 590 5 HOH HOH . H 4 HOH A 91 591 51 HOH HOH . H 4 HOH A 92 592 180 HOH HOH . H 4 HOH A 93 593 92 HOH HOH . H 4 HOH A 94 594 72 HOH HOH . H 4 HOH A 95 595 44 HOH HOH . H 4 HOH A 96 596 36 HOH HOH . H 4 HOH A 97 597 222 HOH HOH . H 4 HOH A 98 598 62 HOH HOH . H 4 HOH A 99 599 25 HOH HOH . H 4 HOH A 100 600 27 HOH HOH . H 4 HOH A 101 601 41 HOH HOH . H 4 HOH A 102 602 7 HOH HOH . H 4 HOH A 103 603 130 HOH HOH . H 4 HOH A 104 604 8 HOH HOH . H 4 HOH A 105 605 4 HOH HOH . H 4 HOH A 106 606 53 HOH HOH . H 4 HOH A 107 607 46 HOH HOH . H 4 HOH A 108 608 40 HOH HOH . H 4 HOH A 109 609 43 HOH HOH . H 4 HOH A 110 610 34 HOH HOH . H 4 HOH A 111 611 50 HOH HOH . H 4 HOH A 112 612 64 HOH HOH . H 4 HOH A 113 613 109 HOH HOH . H 4 HOH A 114 614 94 HOH HOH . H 4 HOH A 115 615 115 HOH HOH . H 4 HOH A 116 616 82 HOH HOH . H 4 HOH A 117 617 66 HOH HOH . H 4 HOH A 118 618 191 HOH HOH . H 4 HOH A 119 619 231 HOH HOH . H 4 HOH A 120 620 100 HOH HOH . H 4 HOH A 121 621 212 HOH HOH . H 4 HOH A 122 622 75 HOH HOH . H 4 HOH A 123 623 49 HOH HOH . H 4 HOH A 124 624 29 HOH HOH . H 4 HOH A 125 625 30 HOH HOH . H 4 HOH A 126 626 165 HOH HOH . H 4 HOH A 127 627 169 HOH HOH . H 4 HOH A 128 628 167 HOH HOH . H 4 HOH A 129 629 135 HOH HOH . H 4 HOH A 130 630 73 HOH HOH . H 4 HOH A 131 631 70 HOH HOH . H 4 HOH A 132 632 77 HOH HOH . H 4 HOH A 133 633 48 HOH HOH . H 4 HOH A 134 634 153 HOH HOH . H 4 HOH A 135 635 139 HOH HOH . H 4 HOH A 136 636 129 HOH HOH . H 4 HOH A 137 637 13 HOH HOH . H 4 HOH A 138 638 96 HOH HOH . H 4 HOH A 139 639 218 HOH HOH . H 4 HOH A 140 640 183 HOH HOH . H 4 HOH A 141 641 137 HOH HOH . H 4 HOH A 142 642 190 HOH HOH . H 4 HOH A 143 643 174 HOH HOH . H 4 HOH A 144 644 186 HOH HOH . H 4 HOH A 145 645 151 HOH HOH . H 4 HOH A 146 646 136 HOH HOH . H 4 HOH A 147 647 211 HOH HOH . H 4 HOH A 148 648 195 HOH HOH . H 4 HOH A 149 649 185 HOH HOH . H 4 HOH A 150 650 216 HOH HOH . H 4 HOH A 151 651 144 HOH HOH . H 4 HOH A 152 652 170 HOH HOH . H 4 HOH A 153 653 97 HOH HOH . H 4 HOH A 154 654 121 HOH HOH . H 4 HOH A 155 655 229 HOH HOH . H 4 HOH A 156 656 145 HOH HOH . H 4 HOH A 157 657 192 HOH HOH . H 4 HOH A 158 658 164 HOH HOH . H 4 HOH A 159 659 179 HOH HOH . H 4 HOH A 160 660 93 HOH HOH . H 4 HOH A 161 661 19 HOH HOH . H 4 HOH A 162 662 193 HOH HOH . H 4 HOH A 163 663 148 HOH HOH . H 4 HOH A 164 664 187 HOH HOH . H 4 HOH A 165 665 210 HOH HOH . H 4 HOH A 166 666 214 HOH HOH . H 4 HOH A 167 667 173 HOH HOH . H 4 HOH A 168 668 104 HOH HOH . H 4 HOH A 169 669 226 HOH HOH . H 4 HOH A 170 670 215 HOH HOH . H 4 HOH A 171 671 202 HOH HOH . H 4 HOH A 172 672 150 HOH HOH . H 4 HOH A 173 673 228 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol TB _atom_site.label_atom_id TB _atom_site.label_comp_id TB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.382 _atom_site.Cartn_y 54.705 _atom_site.Cartn_z 6.494 _atom_site.occupancy 0.56 _atom_site.B_iso_or_equiv 15.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id TB _atom_site.auth_comp_id TB _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #