data_7NY6 # _model_server_result.job_id cNgApZwb8WeyfRFJzyfhTA _model_server_result.datetime_utc '2024-10-20 12:56:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ny6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 7NY6 # _exptl.entry_id 7NY6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.36 _cell.angle_gamma 90 _cell.entry_id 7NY6 _cell.length_a 41.03 _cell.length_b 44.071 _cell.length_c 44.86 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NY6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7NY6 _atom_sites.fract_transf_matrix[1][1] 0.024372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001002 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02231 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 401 EDO EDO . C 2 EDO A 1 402 402 EDO EDO . D 2 EDO A 1 403 403 EDO EDO . E 2 EDO A 1 404 404 EDO EDO . F 2 EDO A 1 405 405 EDO EDO . G 3 PEG A 1 406 406 PEG PEG . H 2 EDO A 1 407 407 EDO EDO . I 2 EDO A 1 408 408 EDO EDO . J 4 HOH A 1 501 224 HOH HOH . J 4 HOH A 2 502 45 HOH HOH . J 4 HOH A 3 503 237 HOH HOH . J 4 HOH A 4 504 28 HOH HOH . J 4 HOH A 5 505 115 HOH HOH . J 4 HOH A 6 506 226 HOH HOH . J 4 HOH A 7 507 236 HOH HOH . J 4 HOH A 8 508 27 HOH HOH . J 4 HOH A 9 509 179 HOH HOH . J 4 HOH A 10 510 233 HOH HOH . J 4 HOH A 11 511 175 HOH HOH . J 4 HOH A 12 512 56 HOH HOH . J 4 HOH A 13 513 88 HOH HOH . J 4 HOH A 14 514 229 HOH HOH . J 4 HOH A 15 515 122 HOH HOH . J 4 HOH A 16 516 164 HOH HOH . J 4 HOH A 17 517 230 HOH HOH . J 4 HOH A 18 518 35 HOH HOH . J 4 HOH A 19 519 30 HOH HOH . J 4 HOH A 20 520 191 HOH HOH . J 4 HOH A 21 521 57 HOH HOH . J 4 HOH A 22 522 153 HOH HOH . J 4 HOH A 23 523 157 HOH HOH . J 4 HOH A 24 524 136 HOH HOH . J 4 HOH A 25 525 242 HOH HOH . J 4 HOH A 26 526 6 HOH HOH . J 4 HOH A 27 527 225 HOH HOH . J 4 HOH A 28 528 95 HOH HOH . J 4 HOH A 29 529 72 HOH HOH . J 4 HOH A 30 530 74 HOH HOH . J 4 HOH A 31 531 148 HOH HOH . J 4 HOH A 32 532 73 HOH HOH . J 4 HOH A 33 533 132 HOH HOH . J 4 HOH A 34 534 17 HOH HOH . J 4 HOH A 35 535 183 HOH HOH . J 4 HOH A 36 536 192 HOH HOH . J 4 HOH A 37 537 147 HOH HOH . J 4 HOH A 38 538 70 HOH HOH . J 4 HOH A 39 539 1 HOH HOH . J 4 HOH A 40 540 107 HOH HOH . J 4 HOH A 41 541 8 HOH HOH . J 4 HOH A 42 542 22 HOH HOH . J 4 HOH A 43 543 130 HOH HOH . J 4 HOH A 44 544 213 HOH HOH . J 4 HOH A 45 545 156 HOH HOH . J 4 HOH A 46 546 227 HOH HOH . J 4 HOH A 47 547 138 HOH HOH . J 4 HOH A 48 548 5 HOH HOH . J 4 HOH A 49 549 102 HOH HOH . J 4 HOH A 50 550 169 HOH HOH . J 4 HOH A 51 551 91 HOH HOH . J 4 HOH A 52 552 168 HOH HOH . J 4 HOH A 53 553 19 HOH HOH . J 4 HOH A 54 554 144 HOH HOH . J 4 HOH A 55 555 9 HOH HOH . J 4 HOH A 56 556 58 HOH HOH . J 4 HOH A 57 557 14 HOH HOH . J 4 HOH A 58 558 189 HOH HOH . J 4 HOH A 59 559 51 HOH HOH . J 4 HOH A 60 560 235 HOH HOH . J 4 HOH A 61 561 46 HOH HOH . J 4 HOH A 62 562 36 HOH HOH . J 4 HOH A 63 563 78 HOH HOH . J 4 HOH A 64 564 159 HOH HOH . J 4 HOH A 65 565 11 HOH HOH . J 4 HOH A 66 566 165 HOH HOH . J 4 HOH A 67 567 208 HOH HOH . J 4 HOH A 68 568 3 HOH HOH . J 4 HOH A 69 569 214 HOH HOH . J 4 HOH A 70 570 64 HOH HOH . J 4 HOH A 71 571 90 HOH HOH . J 4 HOH A 72 572 63 HOH HOH . J 4 HOH A 73 573 112 HOH HOH . J 4 HOH A 74 574 69 HOH HOH . J 4 HOH A 75 575 241 HOH HOH . J 4 HOH A 76 576 171 HOH HOH . J 4 HOH A 77 577 31 HOH HOH . J 4 HOH A 78 578 100 HOH HOH . J 4 HOH A 79 579 16 HOH HOH . J 4 HOH A 80 580 15 HOH HOH . J 4 HOH A 81 581 21 HOH HOH . J 4 HOH A 82 582 20 HOH HOH . J 4 HOH A 83 583 67 HOH HOH . J 4 HOH A 84 584 128 HOH HOH . J 4 HOH A 85 585 77 HOH HOH . J 4 HOH A 86 586 181 HOH HOH . J 4 HOH A 87 587 134 HOH HOH . J 4 HOH A 88 588 97 HOH HOH . J 4 HOH A 89 589 120 HOH HOH . J 4 HOH A 90 590 150 HOH HOH . J 4 HOH A 91 591 133 HOH HOH . J 4 HOH A 92 592 40 HOH HOH . J 4 HOH A 93 593 155 HOH HOH . J 4 HOH A 94 594 26 HOH HOH . J 4 HOH A 95 595 44 HOH HOH . J 4 HOH A 96 596 23 HOH HOH . J 4 HOH A 97 597 24 HOH HOH . J 4 HOH A 98 598 240 HOH HOH . J 4 HOH A 99 599 238 HOH HOH . J 4 HOH A 100 600 13 HOH HOH . J 4 HOH A 101 601 76 HOH HOH . J 4 HOH A 102 602 61 HOH HOH . J 4 HOH A 103 603 117 HOH HOH . J 4 HOH A 104 604 173 HOH HOH . J 4 HOH A 105 605 137 HOH HOH . J 4 HOH A 106 606 2 HOH HOH . J 4 HOH A 107 607 135 HOH HOH . J 4 HOH A 108 608 149 HOH HOH . J 4 HOH A 109 609 129 HOH HOH . J 4 HOH A 110 610 139 HOH HOH . J 4 HOH A 111 611 18 HOH HOH . J 4 HOH A 112 612 75 HOH HOH . J 4 HOH A 113 613 106 HOH HOH . J 4 HOH A 114 614 163 HOH HOH . J 4 HOH A 115 615 68 HOH HOH . J 4 HOH A 116 616 167 HOH HOH . J 4 HOH A 117 617 109 HOH HOH . J 4 HOH A 118 618 53 HOH HOH . J 4 HOH A 119 619 142 HOH HOH . J 4 HOH A 120 620 146 HOH HOH . J 4 HOH A 121 621 161 HOH HOH . J 4 HOH A 122 622 131 HOH HOH . J 4 HOH A 123 623 140 HOH HOH . J 4 HOH A 124 624 199 HOH HOH . J 4 HOH A 125 625 125 HOH HOH . J 4 HOH A 126 626 47 HOH HOH . J 4 HOH A 127 627 234 HOH HOH . J 4 HOH A 128 628 182 HOH HOH . J 4 HOH A 129 629 49 HOH HOH . J 4 HOH A 130 630 43 HOH HOH . J 4 HOH A 131 631 143 HOH HOH . J 4 HOH A 132 632 145 HOH HOH . J 4 HOH A 133 633 141 HOH HOH . J 4 HOH A 134 634 178 HOH HOH . J 4 HOH A 135 635 154 HOH HOH . J 4 HOH A 136 636 196 HOH HOH . J 4 HOH A 137 637 59 HOH HOH . J 4 HOH A 138 638 180 HOH HOH . J 4 HOH A 139 639 96 HOH HOH . J 4 HOH A 140 640 216 HOH HOH . J 4 HOH A 141 641 239 HOH HOH . J 4 HOH A 142 642 207 HOH HOH . J 4 HOH A 143 643 231 HOH HOH . J 4 HOH A 144 644 197 HOH HOH . J 4 HOH A 145 645 104 HOH HOH . J 4 HOH A 146 646 209 HOH HOH . J 4 HOH A 147 647 160 HOH HOH . J 4 HOH A 148 648 82 HOH HOH . J 4 HOH A 149 649 48 HOH HOH . J 4 HOH A 150 650 162 HOH HOH . J 4 HOH A 151 651 232 HOH HOH . J 4 HOH A 152 652 37 HOH HOH . J 4 HOH A 153 653 113 HOH HOH . J 4 HOH A 154 654 55 HOH HOH . J 4 HOH A 155 655 244 HOH HOH . J 4 HOH A 156 656 118 HOH HOH . J 4 HOH A 157 657 228 HOH HOH . J 4 HOH A 158 658 166 HOH HOH . J 4 HOH A 159 659 245 HOH HOH . J 4 HOH A 160 660 98 HOH HOH . J 4 HOH A 161 661 85 HOH HOH . J 4 HOH A 162 662 93 HOH HOH . J 4 HOH A 163 663 193 HOH HOH . J 4 HOH A 164 664 116 HOH HOH . J 4 HOH A 165 665 185 HOH HOH . J 4 HOH A 166 666 124 HOH HOH . J 4 HOH A 167 667 86 HOH HOH . J 4 HOH A 168 668 158 HOH HOH . J 4 HOH A 169 669 243 HOH HOH . J 4 HOH A 170 670 101 HOH HOH . J 4 HOH A 171 671 170 HOH HOH . J 4 HOH A 172 672 190 HOH HOH . J 4 HOH A 173 673 210 HOH HOH . J 4 HOH A 174 674 103 HOH HOH . J 4 HOH A 175 675 201 HOH HOH . J 4 HOH A 176 676 152 HOH HOH . J 4 HOH A 177 677 111 HOH HOH . J 4 HOH A 178 678 172 HOH HOH . J 4 HOH A 179 679 121 HOH HOH . J 4 HOH A 180 680 92 HOH HOH . J 4 HOH A 181 681 206 HOH HOH . J 4 HOH A 182 682 204 HOH HOH . J 4 HOH A 183 683 105 HOH HOH . J 4 HOH A 184 684 38 HOH HOH . J 4 HOH A 185 685 87 HOH HOH . J 4 HOH A 186 686 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 2 -5.412 11.001 17.673 1 32.07 ? C1 EDO 405 A 1 HETATM 2 O O1 EDO . . . F 2 -5.822 11.74 16.504 1 26.49 ? O1 EDO 405 A 1 HETATM 3 C C2 EDO . . . F 2 -6.66 10.565 18.434 1 30.85 ? C2 EDO 405 A 1 HETATM 4 O O2 EDO . . . F 2 -7.335 9.623 17.611 1 37.22 ? O2 EDO 405 A 1 HETATM 5 H H11 EDO . . . F 2 -4.782 11.625 18.31 1 38.53 ? H11 EDO 405 A 1 HETATM 6 H H12 EDO . . . F 2 -4.828 10.126 17.378 1 38.53 ? H12 EDO 405 A 1 HETATM 7 H HO1 EDO . . . F 2 -5.055 11.895 15.935 1 31.83 ? HO1 EDO 405 A 1 HETATM 8 H H21 EDO . . . F 2 -7.302 11.424 18.64 1 37.06 ? H21 EDO 405 A 1 HETATM 9 H H22 EDO . . . F 2 -6.387 10.113 19.39 1 37.06 ? H22 EDO 405 A 1 HETATM 10 H HO2 EDO . . . F 2 -6.893 8.765 17.674 1 44.71 ? HO2 EDO 405 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #