data_7NY7
#
_model_server_result.job_id            MBvzZ09JSssrgG7vDh34AQ 
_model_server_result.datetime_utc      '2024-10-20 12:31:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ny7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    7NY7 
#
_exptl.entry_id    7NY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7NY7 
_cell.length_a            71.392 
_cell.length_b            71.392 
_cell.length_c            81.26 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7NY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 145 n n 
C1 C2 EDO sing 146 n n 
C1 H11 EDO sing 147 n n 
C1 H12 EDO sing 148 n n 
O1 HO1 EDO sing 149 n n 
C2 O2 EDO sing 150 n n 
C2 H21 EDO sing 151 n n 
C2 H22 EDO sing 152 n n 
O2 HO2 EDO sing 153 n n 
#
_atom_sites.entry_id                     7NY7 
_atom_sites.fract_transf_matrix[1][1]    0.014007 
_atom_sites.fract_transf_matrix[1][2]    0.008087 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012306 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 401 401 EDO EDO . 
C 2 EDO A 1 402 402 EDO EDO . 
D 3 APR A 1 403 400 APR APR . 
E 2 EDO A 1 404 365 EDO EDO . 
F 4 HOH A 1 501 3 HOH HOH . 
F 4 HOH A 2 502 163 HOH HOH . 
F 4 HOH A 3 503 82 HOH HOH . 
F 4 HOH A 4 504 14 HOH HOH . 
F 4 HOH A 5 505 13 HOH HOH . 
F 4 HOH A 6 506 144 HOH HOH . 
F 4 HOH A 7 507 122 HOH HOH . 
F 4 HOH A 8 508 25 HOH HOH . 
F 4 HOH A 9 509 28 HOH HOH . 
F 4 HOH A 10 510 44 HOH HOH . 
F 4 HOH A 11 511 6 HOH HOH . 
F 4 HOH A 12 512 16 HOH HOH . 
F 4 HOH A 13 513 138 HOH HOH . 
F 4 HOH A 14 514 76 HOH HOH . 
F 4 HOH A 15 515 152 HOH HOH . 
F 4 HOH A 16 516 8 HOH HOH . 
F 4 HOH A 17 517 69 HOH HOH . 
F 4 HOH A 18 518 38 HOH HOH . 
F 4 HOH A 19 519 24 HOH HOH . 
F 4 HOH A 20 520 14 HOH HOH . 
F 4 HOH A 21 521 48 HOH HOH . 
F 4 HOH A 22 522 91 HOH HOH . 
F 4 HOH A 23 523 143 HOH HOH . 
F 4 HOH A 24 524 157 HOH HOH . 
F 4 HOH A 25 525 104 HOH HOH . 
F 4 HOH A 26 526 47 HOH HOH . 
F 4 HOH A 27 527 137 HOH HOH . 
F 4 HOH A 28 528 11 HOH HOH . 
F 4 HOH A 29 529 63 HOH HOH . 
F 4 HOH A 30 530 68 HOH HOH . 
F 4 HOH A 31 531 77 HOH HOH . 
F 4 HOH A 32 532 65 HOH HOH . 
F 4 HOH A 33 533 26 HOH HOH . 
F 4 HOH A 34 534 15 HOH HOH . 
F 4 HOH A 35 535 7 HOH HOH . 
F 4 HOH A 36 536 18 HOH HOH . 
F 4 HOH A 37 537 153 HOH HOH . 
F 4 HOH A 38 538 2 HOH HOH . 
F 4 HOH A 39 539 62 HOH HOH . 
F 4 HOH A 40 540 40 HOH HOH . 
F 4 HOH A 41 541 20 HOH HOH . 
F 4 HOH A 42 542 165 HOH HOH . 
F 4 HOH A 43 543 42 HOH HOH . 
F 4 HOH A 44 544 164 HOH HOH . 
F 4 HOH A 45 545 1 HOH HOH . 
F 4 HOH A 46 546 5 HOH HOH . 
F 4 HOH A 47 547 10 HOH HOH . 
F 4 HOH A 48 548 59 HOH HOH . 
F 4 HOH A 49 549 6 HOH HOH . 
F 4 HOH A 50 550 37 HOH HOH . 
F 4 HOH A 51 551 158 HOH HOH . 
F 4 HOH A 52 552 13 HOH HOH . 
F 4 HOH A 53 553 23 HOH HOH . 
F 4 HOH A 54 554 17 HOH HOH . 
F 4 HOH A 55 555 22 HOH HOH . 
F 4 HOH A 56 556 106 HOH HOH . 
F 4 HOH A 57 557 39 HOH HOH . 
F 4 HOH A 58 558 53 HOH HOH . 
F 4 HOH A 59 559 21 HOH HOH . 
F 4 HOH A 60 560 113 HOH HOH . 
F 4 HOH A 61 561 25 HOH HOH . 
F 4 HOH A 62 562 64 HOH HOH . 
F 4 HOH A 63 563 29 HOH HOH . 
F 4 HOH A 64 564 8 HOH HOH . 
F 4 HOH A 65 565 126 HOH HOH . 
F 4 HOH A 66 566 61 HOH HOH . 
F 4 HOH A 67 567 1 HOH HOH . 
F 4 HOH A 68 568 80 HOH HOH . 
F 4 HOH A 69 569 12 HOH HOH . 
F 4 HOH A 70 570 74 HOH HOH . 
F 4 HOH A 71 571 103 HOH HOH . 
F 4 HOH A 72 572 3 HOH HOH . 
F 4 HOH A 73 573 83 HOH HOH . 
F 4 HOH A 74 574 117 HOH HOH . 
F 4 HOH A 75 575 50 HOH HOH . 
F 4 HOH A 76 576 54 HOH HOH . 
F 4 HOH A 77 577 114 HOH HOH . 
F 4 HOH A 78 578 24 HOH HOH . 
F 4 HOH A 79 579 51 HOH HOH . 
F 4 HOH A 80 580 49 HOH HOH . 
F 4 HOH A 81 581 45 HOH HOH . 
F 4 HOH A 82 582 98 HOH HOH . 
F 4 HOH A 83 583 41 HOH HOH . 
F 4 HOH A 84 584 147 HOH HOH . 
F 4 HOH A 85 585 36 HOH HOH . 
F 4 HOH A 86 586 12 HOH HOH . 
F 4 HOH A 87 587 135 HOH HOH . 
F 4 HOH A 88 588 34 HOH HOH . 
F 4 HOH A 89 589 159 HOH HOH . 
F 4 HOH A 90 590 131 HOH HOH . 
F 4 HOH A 91 591 162 HOH HOH . 
F 4 HOH A 92 592 22 HOH HOH . 
F 4 HOH A 93 593 11 HOH HOH . 
F 4 HOH A 94 594 27 HOH HOH . 
F 4 HOH A 95 595 60 HOH HOH . 
F 4 HOH A 96 596 84 HOH HOH . 
F 4 HOH A 97 597 136 HOH HOH . 
F 4 HOH A 98 598 32 HOH HOH . 
F 4 HOH A 99 599 86 HOH HOH . 
F 4 HOH A 100 600 52 HOH HOH . 
F 4 HOH A 101 601 43 HOH HOH . 
F 4 HOH A 102 602 46 HOH HOH . 
F 4 HOH A 103 603 112 HOH HOH . 
F 4 HOH A 104 604 149 HOH HOH . 
F 4 HOH A 105 605 30 HOH HOH . 
F 4 HOH A 106 606 19 HOH HOH . 
F 4 HOH A 107 607 35 HOH HOH . 
F 4 HOH A 108 608 124 HOH HOH . 
F 4 HOH A 109 609 33 HOH HOH . 
F 4 HOH A 110 610 161 HOH HOH . 
F 4 HOH A 111 611 94 HOH HOH . 
F 4 HOH A 112 612 87 HOH HOH . 
F 4 HOH A 113 613 160 HOH HOH . 
F 4 HOH A 114 614 7 HOH HOH . 
F 4 HOH A 115 615 67 HOH HOH . 
F 4 HOH A 116 616 121 HOH HOH . 
F 4 HOH A 117 617 21 HOH HOH . 
F 4 HOH A 118 618 150 HOH HOH . 
F 4 HOH A 119 619 58 HOH HOH . 
F 4 HOH A 120 620 4 HOH HOH . 
F 4 HOH A 121 621 88 HOH HOH . 
F 4 HOH A 122 622 31 HOH HOH . 
F 4 HOH A 123 623 145 HOH HOH . 
F 4 HOH A 124 624 146 HOH HOH . 
F 4 HOH A 125 625 5 HOH HOH . 
F 4 HOH A 126 626 18 HOH HOH . 
F 4 HOH A 127 627 85 HOH HOH . 
F 4 HOH A 128 628 75 HOH HOH . 
F 4 HOH A 129 629 73 HOH HOH . 
F 4 HOH A 130 630 139 HOH HOH . 
F 4 HOH A 131 631 66 HOH HOH . 
F 4 HOH A 132 632 81 HOH HOH . 
F 4 HOH A 133 633 90 HOH HOH . 
F 4 HOH A 134 634 89 HOH HOH . 
F 4 HOH A 135 635 78 HOH HOH . 
F 4 HOH A 136 636 130 HOH HOH . 
F 4 HOH A 137 637 2 HOH HOH . 
F 4 HOH A 138 638 116 HOH HOH . 
F 4 HOH A 139 639 10 HOH HOH . 
F 4 HOH A 140 640 154 HOH HOH . 
F 4 HOH A 141 641 134 HOH HOH . 
F 4 HOH A 142 642 23 HOH HOH . 
F 4 HOH A 143 643 148 HOH HOH . 
F 4 HOH A 144 644 115 HOH HOH . 
F 4 HOH A 145 645 96 HOH HOH . 
F 4 HOH A 146 646 16 HOH HOH . 
F 4 HOH A 147 647 118 HOH HOH . 
F 4 HOH A 148 648 111 HOH HOH . 
F 4 HOH A 149 649 20 HOH HOH . 
F 4 HOH A 150 650 119 HOH HOH . 
F 4 HOH A 151 651 156 HOH HOH . 
F 4 HOH A 152 652 57 HOH HOH . 
F 4 HOH A 153 653 92 HOH HOH . 
F 4 HOH A 154 654 110 HOH HOH . 
F 4 HOH A 155 655 93 HOH HOH . 
F 4 HOH A 156 656 142 HOH HOH . 
F 4 HOH A 157 657 17 HOH HOH . 
F 4 HOH A 158 658 108 HOH HOH . 
F 4 HOH A 159 659 107 HOH HOH . 
F 4 HOH A 160 660 79 HOH HOH . 
F 4 HOH A 161 661 19 HOH HOH . 
F 4 HOH A 162 662 99 HOH HOH . 
F 4 HOH A 163 663 95 HOH HOH . 
F 4 HOH A 164 664 56 HOH HOH . 
F 4 HOH A 165 665 129 HOH HOH . 
F 4 HOH A 166 666 100 HOH HOH . 
F 4 HOH A 167 667 125 HOH HOH . 
F 4 HOH A 168 668 71 HOH HOH . 
F 4 HOH A 169 669 128 HOH HOH . 
F 4 HOH A 170 670 9 HOH HOH . 
F 4 HOH A 171 671 97 HOH HOH . 
F 4 HOH A 172 672 72 HOH HOH . 
F 4 HOH A 173 673 70 HOH HOH . 
F 4 HOH A 174 674 55 HOH HOH . 
F 4 HOH A 175 675 155 HOH HOH . 
F 4 HOH A 176 676 132 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 2.123 35.018 32.394 1 14.43 ? C1 EDO 404 A 1 
HETATM 2 O O1 EDO . . . E 2 2.743 34.509 33.583 1 16.44 ? O1 EDO 404 A 1 
HETATM 3 C C2 EDO . . . E 2 1.084 36.071 32.783 1 12.91 ? C2 EDO 404 A 1 
HETATM 4 O O2 EDO . . . E 2 1.735 37.138 33.483 1 18.1 ? O2 EDO 404 A 1 
HETATM 5 H H11 EDO . . . E 2 1.643 34.205 31.847 1 17.27 ? H11 EDO 404 A 1 
HETATM 6 H H12 EDO . . . E 2 2.877 35.463 31.741 1 17.27 ? H12 EDO 404 A 1 
HETATM 7 H HO1 EDO . . . E 2 3.239 33.707 33.37 1 19.67 ? HO1 EDO 404 A 1 
HETATM 8 H H21 EDO . . . E 2 0.319 35.621 33.419 1 15.44 ? H21 EDO 404 A 1 
HETATM 9 H H22 EDO . . . E 2 0.593 36.458 31.888 1 15.44 ? H22 EDO 404 A 1 
HETATM 10 H HO2 EDO . . . E 2 1.164 37.918 33.484 1 21.67 ? HO2 EDO 404 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           10 
#