data_7NZ6 # _model_server_result.job_id IJcMwRlEGklafVE0iue5Ww _model_server_result.datetime_utc '2024-11-29 07:50:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 7NZ6 # _exptl.entry_id 7NZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7NZ6 _cell.length_a 82.565 _cell.length_b 112.612 _cell.length_c 62.659 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 42 A SER 37 1_555 A N CSO 43 A CSO 38 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C SER 42 A SER 37 1_555 A N CSO 43 A CSO 38 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.34 ? covale ? covale3 A C CSO 43 A CSO 38 1_555 A N GLU 44 A GLU 39 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C CSO 43 A CSO 38 1_555 A N GLU 44 A GLU 39 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A NZ LYS 127 A LYS 122 1_555 C C01 UWH . A UWH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale6 B C GLY 6 P GLY 44 1_555 B N SEP 7 P SEP 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 B C SEP 7 P SEP 45 1_555 B N ILE 8 P ILE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A OE1 GLU 7 A GLU 2 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc2 A OE1 GLU 7 A GLU 2 1_555 D CA CA . A CA 302 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc3 D CA CA . A CA 302 1_555 H O HOH . A HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc4 D CA CA . A CA 302 1_555 H O HOH . A HOH 436 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc5 D CA CA . A CA 302 1_555 H O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc6 D CA CA . A CA 302 1_555 H O HOH . A HOH 601 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NZ6 _atom_sites.fract_transf_matrix[1][1] 0.012112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UWH A 1 301 1 UWH LNO . D 4 CA A 1 302 1 CA CA . E 5 CL A 1 303 1 CL CL . F 6 GOL A 1 304 1 GOL GOL . G 6 GOL A 1 305 2 GOL GOL . H 7 HOH A 1 401 317 HOH HOH . H 7 HOH A 2 402 172 HOH HOH . H 7 HOH A 3 403 347 HOH HOH . H 7 HOH A 4 404 268 HOH HOH . H 7 HOH A 5 405 298 HOH HOH . H 7 HOH A 6 406 243 HOH HOH . H 7 HOH A 7 407 171 HOH HOH . H 7 HOH A 8 408 107 HOH HOH . H 7 HOH A 9 409 186 HOH HOH . H 7 HOH A 10 410 89 HOH HOH . H 7 HOH A 11 411 134 HOH HOH . H 7 HOH A 12 412 159 HOH HOH . H 7 HOH A 13 413 147 HOH HOH . H 7 HOH A 14 414 240 HOH HOH . H 7 HOH A 15 415 287 HOH HOH . H 7 HOH A 16 416 253 HOH HOH . H 7 HOH A 17 417 183 HOH HOH . H 7 HOH A 18 418 228 HOH HOH . H 7 HOH A 19 419 104 HOH HOH . H 7 HOH A 20 420 296 HOH HOH . H 7 HOH A 21 421 21 HOH HOH . H 7 HOH A 22 422 179 HOH HOH . H 7 HOH A 23 423 141 HOH HOH . H 7 HOH A 24 424 274 HOH HOH . H 7 HOH A 25 425 201 HOH HOH . H 7 HOH A 26 426 310 HOH HOH . H 7 HOH A 27 427 7 HOH HOH . H 7 HOH A 28 428 105 HOH HOH . H 7 HOH A 29 429 37 HOH HOH . H 7 HOH A 30 430 230 HOH HOH . H 7 HOH A 31 431 94 HOH HOH . H 7 HOH A 32 432 76 HOH HOH . H 7 HOH A 33 433 152 HOH HOH . H 7 HOH A 34 434 200 HOH HOH . H 7 HOH A 35 435 208 HOH HOH . H 7 HOH A 36 436 19 HOH HOH . H 7 HOH A 37 437 10 HOH HOH . H 7 HOH A 38 438 69 HOH HOH . H 7 HOH A 39 439 46 HOH HOH . H 7 HOH A 40 440 273 HOH HOH . H 7 HOH A 41 441 247 HOH HOH . H 7 HOH A 42 442 217 HOH HOH . H 7 HOH A 43 443 293 HOH HOH . H 7 HOH A 44 444 101 HOH HOH . H 7 HOH A 45 445 98 HOH HOH . H 7 HOH A 46 446 52 HOH HOH . H 7 HOH A 47 447 13 HOH HOH . H 7 HOH A 48 448 2 HOH HOH . H 7 HOH A 49 449 36 HOH HOH . H 7 HOH A 50 450 241 HOH HOH . H 7 HOH A 51 451 191 HOH HOH . H 7 HOH A 52 452 248 HOH HOH . H 7 HOH A 53 453 83 HOH HOH . H 7 HOH A 54 454 20 HOH HOH . H 7 HOH A 55 455 297 HOH HOH . H 7 HOH A 56 456 137 HOH HOH . H 7 HOH A 57 457 49 HOH HOH . H 7 HOH A 58 458 80 HOH HOH . H 7 HOH A 59 459 211 HOH HOH . H 7 HOH A 60 460 139 HOH HOH . H 7 HOH A 61 461 97 HOH HOH . H 7 HOH A 62 462 24 HOH HOH . H 7 HOH A 63 463 180 HOH HOH . H 7 HOH A 64 464 129 HOH HOH . H 7 HOH A 65 465 161 HOH HOH . H 7 HOH A 66 466 151 HOH HOH . H 7 HOH A 67 467 6 HOH HOH . H 7 HOH A 68 468 56 HOH HOH . H 7 HOH A 69 469 77 HOH HOH . H 7 HOH A 70 470 11 HOH HOH . H 7 HOH A 71 471 157 HOH HOH . H 7 HOH A 72 472 224 HOH HOH . H 7 HOH A 73 473 28 HOH HOH . H 7 HOH A 74 474 23 HOH HOH . H 7 HOH A 75 475 99 HOH HOH . H 7 HOH A 76 476 279 HOH HOH . H 7 HOH A 77 477 225 HOH HOH . H 7 HOH A 78 478 149 HOH HOH . H 7 HOH A 79 479 27 HOH HOH . H 7 HOH A 80 480 113 HOH HOH . H 7 HOH A 81 481 50 HOH HOH . H 7 HOH A 82 482 41 HOH HOH . H 7 HOH A 83 483 4 HOH HOH . H 7 HOH A 84 484 322 HOH HOH . H 7 HOH A 85 485 270 HOH HOH . H 7 HOH A 86 486 199 HOH HOH . H 7 HOH A 87 487 43 HOH HOH . H 7 HOH A 88 488 29 HOH HOH . H 7 HOH A 89 489 244 HOH HOH . H 7 HOH A 90 490 25 HOH HOH . H 7 HOH A 91 491 38 HOH HOH . H 7 HOH A 92 492 61 HOH HOH . H 7 HOH A 93 493 71 HOH HOH . H 7 HOH A 94 494 96 HOH HOH . H 7 HOH A 95 495 116 HOH HOH . H 7 HOH A 96 496 57 HOH HOH . H 7 HOH A 97 497 122 HOH HOH . H 7 HOH A 98 498 163 HOH HOH . H 7 HOH A 99 499 123 HOH HOH . H 7 HOH A 100 500 219 HOH HOH . H 7 HOH A 101 501 272 HOH HOH . H 7 HOH A 102 502 22 HOH HOH . H 7 HOH A 103 503 209 HOH HOH . H 7 HOH A 104 504 275 HOH HOH . H 7 HOH A 105 505 30 HOH HOH . H 7 HOH A 106 506 26 HOH HOH . H 7 HOH A 107 507 73 HOH HOH . H 7 HOH A 108 508 9 HOH HOH . H 7 HOH A 109 509 87 HOH HOH . H 7 HOH A 110 510 299 HOH HOH . H 7 HOH A 111 511 62 HOH HOH . H 7 HOH A 112 512 82 HOH HOH . H 7 HOH A 113 513 126 HOH HOH . H 7 HOH A 114 514 14 HOH HOH . H 7 HOH A 115 515 79 HOH HOH . H 7 HOH A 116 516 246 HOH HOH . H 7 HOH A 117 517 17 HOH HOH . H 7 HOH A 118 518 140 HOH HOH . H 7 HOH A 119 519 81 HOH HOH . H 7 HOH A 120 520 39 HOH HOH . H 7 HOH A 121 521 156 HOH HOH . H 7 HOH A 122 522 31 HOH HOH . H 7 HOH A 123 523 12 HOH HOH . H 7 HOH A 124 524 53 HOH HOH . H 7 HOH A 125 525 189 HOH HOH . H 7 HOH A 126 526 45 HOH HOH . H 7 HOH A 127 527 42 HOH HOH . H 7 HOH A 128 528 64 HOH HOH . H 7 HOH A 129 529 91 HOH HOH . H 7 HOH A 130 530 319 HOH HOH . H 7 HOH A 131 531 90 HOH HOH . H 7 HOH A 132 532 78 HOH HOH . H 7 HOH A 133 533 130 HOH HOH . H 7 HOH A 134 534 85 HOH HOH . H 7 HOH A 135 535 166 HOH HOH . H 7 HOH A 136 536 203 HOH HOH . H 7 HOH A 137 537 215 HOH HOH . H 7 HOH A 138 538 54 HOH HOH . H 7 HOH A 139 539 67 HOH HOH . H 7 HOH A 140 540 252 HOH HOH . H 7 HOH A 141 541 251 HOH HOH . H 7 HOH A 142 542 70 HOH HOH . H 7 HOH A 143 543 106 HOH HOH . H 7 HOH A 144 544 236 HOH HOH . H 7 HOH A 145 545 60 HOH HOH . H 7 HOH A 146 546 238 HOH HOH . H 7 HOH A 147 547 265 HOH HOH . H 7 HOH A 148 548 84 HOH HOH . H 7 HOH A 149 549 74 HOH HOH . H 7 HOH A 150 550 33 HOH HOH . H 7 HOH A 151 551 153 HOH HOH . H 7 HOH A 152 552 65 HOH HOH . H 7 HOH A 153 553 40 HOH HOH . H 7 HOH A 154 554 173 HOH HOH . H 7 HOH A 155 555 143 HOH HOH . H 7 HOH A 156 556 118 HOH HOH . H 7 HOH A 157 557 16 HOH HOH . H 7 HOH A 158 558 124 HOH HOH . H 7 HOH A 159 559 66 HOH HOH . H 7 HOH A 160 560 142 HOH HOH . H 7 HOH A 161 561 277 HOH HOH . H 7 HOH A 162 562 114 HOH HOH . H 7 HOH A 163 563 214 HOH HOH . H 7 HOH A 164 564 15 HOH HOH . H 7 HOH A 165 565 63 HOH HOH . H 7 HOH A 166 566 227 HOH HOH . H 7 HOH A 167 567 338 HOH HOH . H 7 HOH A 168 568 190 HOH HOH . H 7 HOH A 169 569 72 HOH HOH . H 7 HOH A 170 570 210 HOH HOH . H 7 HOH A 171 571 34 HOH HOH . H 7 HOH A 172 572 267 HOH HOH . H 7 HOH A 173 573 121 HOH HOH . H 7 HOH A 174 574 207 HOH HOH . H 7 HOH A 175 575 206 HOH HOH . H 7 HOH A 176 576 51 HOH HOH . H 7 HOH A 177 577 278 HOH HOH . H 7 HOH A 178 578 68 HOH HOH . H 7 HOH A 179 579 32 HOH HOH . H 7 HOH A 180 580 168 HOH HOH . H 7 HOH A 181 581 239 HOH HOH . H 7 HOH A 182 582 131 HOH HOH . H 7 HOH A 183 583 233 HOH HOH . H 7 HOH A 184 584 110 HOH HOH . H 7 HOH A 185 585 5 HOH HOH . H 7 HOH A 186 586 8 HOH HOH . H 7 HOH A 187 587 111 HOH HOH . H 7 HOH A 188 588 314 HOH HOH . H 7 HOH A 189 589 320 HOH HOH . H 7 HOH A 190 590 204 HOH HOH . H 7 HOH A 191 591 221 HOH HOH . H 7 HOH A 192 592 262 HOH HOH . H 7 HOH A 193 593 188 HOH HOH . H 7 HOH A 194 594 100 HOH HOH . H 7 HOH A 195 595 290 HOH HOH . H 7 HOH A 196 596 185 HOH HOH . H 7 HOH A 197 597 307 HOH HOH . H 7 HOH A 198 598 181 HOH HOH . H 7 HOH A 199 599 237 HOH HOH . H 7 HOH A 200 600 145 HOH HOH . H 7 HOH A 201 601 226 HOH HOH . H 7 HOH A 202 602 35 HOH HOH . H 7 HOH A 203 603 346 HOH HOH . H 7 HOH A 204 604 294 HOH HOH . H 7 HOH A 205 605 127 HOH HOH . H 7 HOH A 206 606 198 HOH HOH . H 7 HOH A 207 607 170 HOH HOH . H 7 HOH A 208 608 291 HOH HOH . H 7 HOH A 209 609 242 HOH HOH . H 7 HOH A 210 610 231 HOH HOH . H 7 HOH A 211 611 197 HOH HOH . H 7 HOH A 212 612 160 HOH HOH . H 7 HOH A 213 613 266 HOH HOH . H 7 HOH A 214 614 223 HOH HOH . H 7 HOH A 215 615 259 HOH HOH . H 7 HOH A 216 616 169 HOH HOH . H 7 HOH A 217 617 285 HOH HOH . H 7 HOH A 218 618 325 HOH HOH . H 7 HOH A 219 619 345 HOH HOH . H 7 HOH A 220 620 128 HOH HOH . H 7 HOH A 221 621 117 HOH HOH . H 7 HOH A 222 622 174 HOH HOH . H 7 HOH A 223 623 234 HOH HOH . H 7 HOH A 224 624 44 HOH HOH . H 7 HOH A 225 625 261 HOH HOH . H 7 HOH A 226 626 193 HOH HOH . H 7 HOH A 227 627 18 HOH HOH . H 7 HOH A 228 628 311 HOH HOH . H 7 HOH A 229 629 313 HOH HOH . H 7 HOH A 230 630 194 HOH HOH . H 7 HOH A 231 631 133 HOH HOH . H 7 HOH A 232 632 158 HOH HOH . H 7 HOH A 233 633 202 HOH HOH . H 7 HOH A 234 634 144 HOH HOH . H 7 HOH A 235 635 88 HOH HOH . H 7 HOH A 236 636 115 HOH HOH . H 7 HOH A 237 637 108 HOH HOH . H 7 HOH A 238 638 323 HOH HOH . H 7 HOH A 239 639 256 HOH HOH . H 7 HOH A 240 640 150 HOH HOH . H 7 HOH A 241 641 75 HOH HOH . H 7 HOH A 242 642 271 HOH HOH . H 7 HOH A 243 643 125 HOH HOH . H 7 HOH A 244 644 103 HOH HOH . H 7 HOH A 245 645 282 HOH HOH . H 7 HOH A 246 646 330 HOH HOH . H 7 HOH A 247 647 306 HOH HOH . H 7 HOH A 248 648 109 HOH HOH . H 7 HOH A 249 649 288 HOH HOH . H 7 HOH A 250 650 286 HOH HOH . H 7 HOH A 251 651 276 HOH HOH . H 7 HOH A 252 652 86 HOH HOH . H 7 HOH A 253 653 280 HOH HOH . H 7 HOH A 254 654 155 HOH HOH . H 7 HOH A 255 655 289 HOH HOH . H 7 HOH A 256 656 138 HOH HOH . H 7 HOH A 257 657 48 HOH HOH . I 7 HOH P 1 101 92 HOH HOH . I 7 HOH P 2 102 178 HOH HOH . I 7 HOH P 3 103 3 HOH HOH . I 7 HOH P 4 104 167 HOH HOH . I 7 HOH P 5 105 305 HOH HOH . I 7 HOH P 6 106 301 HOH HOH . I 7 HOH P 7 107 120 HOH HOH . I 7 HOH P 8 108 177 HOH HOH . I 7 HOH P 9 109 165 HOH HOH . I 7 HOH P 10 110 303 HOH HOH . I 7 HOH P 11 111 283 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 0 _atom_site.Cartn_y -21.04 _atom_site.Cartn_z -15.665 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 25.78 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #