data_7NZW # _model_server_result.job_id TgTxLStqw5_r8tgomL4K0g _model_server_result.datetime_utc '2024-11-14 05:49:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7nzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7NZW # _exptl.entry_id 7NZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.2 _cell.angle_gamma 90 _cell.entry_id 7NZW _cell.length_a 42.222 _cell.length_b 41.289 _cell.length_c 71.468 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 73 A SER 73 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc3 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc4 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 A OG SER 219 A SER 219 1_555 D NA NA . A NA 303 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc6 B ZN ZN . A ZN 301 1_555 C N23 V50 . A V50 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.985 ? metalc ? metalc7 B ZN ZN . A ZN 301 1_555 C N23 V50 . A V50 302 1_555 ? ? ? ? C ? ? ? ? ? ? ? 1.927 ? metalc ? metalc8 D NA NA . A NA 303 1_555 F O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc9 D NA NA . A NA 303 1_555 F O HOH . A HOH 445 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc10 D NA NA . A NA 303 1_555 F O HOH . A HOH 473 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc11 D NA NA . A NA 303 1_555 F O HOH . A HOH 517 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7NZW _atom_sites.fract_transf_matrix[1][1] 0.023684 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005992 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014433 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 1 ZN ZN . C 3 V50 A 1 302 1 V50 V50 . D 4 NA A 1 303 1 NA NA . E 5 DMS A 1 304 1 DMS DMS . F 6 HOH A 1 401 259 HOH HOH . F 6 HOH A 2 402 217 HOH HOH . F 6 HOH A 3 403 232 HOH HOH . F 6 HOH A 4 404 140 HOH HOH . F 6 HOH A 5 405 220 HOH HOH . F 6 HOH A 6 406 68 HOH HOH . F 6 HOH A 7 407 39 HOH HOH . F 6 HOH A 8 408 71 HOH HOH . F 6 HOH A 9 409 133 HOH HOH . F 6 HOH A 10 410 237 HOH HOH . F 6 HOH A 11 411 226 HOH HOH . F 6 HOH A 12 412 146 HOH HOH . F 6 HOH A 13 413 116 HOH HOH . F 6 HOH A 14 414 59 HOH HOH . F 6 HOH A 15 415 252 HOH HOH . F 6 HOH A 16 416 224 HOH HOH . F 6 HOH A 17 417 172 HOH HOH . F 6 HOH A 18 418 160 HOH HOH . F 6 HOH A 19 419 125 HOH HOH . F 6 HOH A 20 420 152 HOH HOH . F 6 HOH A 21 421 31 HOH HOH . F 6 HOH A 22 422 102 HOH HOH . F 6 HOH A 23 423 170 HOH HOH . F 6 HOH A 24 424 111 HOH HOH . F 6 HOH A 25 425 93 HOH HOH . F 6 HOH A 26 426 85 HOH HOH . F 6 HOH A 27 427 205 HOH HOH . F 6 HOH A 28 428 153 HOH HOH . F 6 HOH A 29 429 255 HOH HOH . F 6 HOH A 30 430 80 HOH HOH . F 6 HOH A 31 431 200 HOH HOH . F 6 HOH A 32 432 44 HOH HOH . F 6 HOH A 33 433 47 HOH HOH . F 6 HOH A 34 434 221 HOH HOH . F 6 HOH A 35 435 135 HOH HOH . F 6 HOH A 36 436 6 HOH HOH . F 6 HOH A 37 437 1 HOH HOH . F 6 HOH A 38 438 18 HOH HOH . F 6 HOH A 39 439 38 HOH HOH . F 6 HOH A 40 440 26 HOH HOH . F 6 HOH A 41 441 113 HOH HOH . F 6 HOH A 42 442 243 HOH HOH . F 6 HOH A 43 443 183 HOH HOH . F 6 HOH A 44 444 132 HOH HOH . F 6 HOH A 45 445 163 HOH HOH . F 6 HOH A 46 446 194 HOH HOH . F 6 HOH A 47 447 69 HOH HOH . F 6 HOH A 48 448 228 HOH HOH . F 6 HOH A 49 449 35 HOH HOH . F 6 HOH A 50 450 127 HOH HOH . F 6 HOH A 51 451 9 HOH HOH . F 6 HOH A 52 452 37 HOH HOH . F 6 HOH A 53 453 10 HOH HOH . F 6 HOH A 54 454 55 HOH HOH . F 6 HOH A 55 455 136 HOH HOH . F 6 HOH A 56 456 117 HOH HOH . F 6 HOH A 57 457 33 HOH HOH . F 6 HOH A 58 458 84 HOH HOH . F 6 HOH A 59 459 12 HOH HOH . F 6 HOH A 60 460 90 HOH HOH . F 6 HOH A 61 461 147 HOH HOH . F 6 HOH A 62 462 202 HOH HOH . F 6 HOH A 63 463 175 HOH HOH . F 6 HOH A 64 464 138 HOH HOH . F 6 HOH A 65 465 81 HOH HOH . F 6 HOH A 66 466 45 HOH HOH . F 6 HOH A 67 467 130 HOH HOH . F 6 HOH A 68 468 149 HOH HOH . F 6 HOH A 69 469 253 HOH HOH . F 6 HOH A 70 470 51 HOH HOH . F 6 HOH A 71 471 14 HOH HOH . F 6 HOH A 72 472 193 HOH HOH . F 6 HOH A 73 473 141 HOH HOH . F 6 HOH A 74 474 67 HOH HOH . F 6 HOH A 75 475 7 HOH HOH . F 6 HOH A 76 476 2 HOH HOH . F 6 HOH A 77 477 161 HOH HOH . F 6 HOH A 78 478 124 HOH HOH . F 6 HOH A 79 479 43 HOH HOH . F 6 HOH A 80 480 78 HOH HOH . F 6 HOH A 81 481 142 HOH HOH . F 6 HOH A 82 482 27 HOH HOH . F 6 HOH A 83 483 96 HOH HOH . F 6 HOH A 84 484 145 HOH HOH . F 6 HOH A 85 485 61 HOH HOH . F 6 HOH A 86 486 56 HOH HOH . F 6 HOH A 87 487 88 HOH HOH . F 6 HOH A 88 488 17 HOH HOH . F 6 HOH A 89 489 52 HOH HOH . F 6 HOH A 90 490 20 HOH HOH . F 6 HOH A 91 491 32 HOH HOH . F 6 HOH A 92 492 19 HOH HOH . F 6 HOH A 93 493 57 HOH HOH . F 6 HOH A 94 494 107 HOH HOH . F 6 HOH A 95 495 70 HOH HOH . F 6 HOH A 96 496 62 HOH HOH . F 6 HOH A 97 497 5 HOH HOH . F 6 HOH A 98 498 29 HOH HOH . F 6 HOH A 99 499 63 HOH HOH . F 6 HOH A 100 500 219 HOH HOH . F 6 HOH A 101 501 76 HOH HOH . F 6 HOH A 102 502 95 HOH HOH . F 6 HOH A 103 503 112 HOH HOH . F 6 HOH A 104 504 4 HOH HOH . F 6 HOH A 105 505 106 HOH HOH . F 6 HOH A 106 506 23 HOH HOH . F 6 HOH A 107 507 210 HOH HOH . F 6 HOH A 108 508 22 HOH HOH . F 6 HOH A 109 509 8 HOH HOH . F 6 HOH A 110 510 28 HOH HOH . F 6 HOH A 111 511 231 HOH HOH . F 6 HOH A 112 512 179 HOH HOH . F 6 HOH A 113 513 159 HOH HOH . F 6 HOH A 114 514 15 HOH HOH . F 6 HOH A 115 515 190 HOH HOH . F 6 HOH A 116 516 206 HOH HOH . F 6 HOH A 117 517 36 HOH HOH . F 6 HOH A 118 518 240 HOH HOH . F 6 HOH A 119 519 192 HOH HOH . F 6 HOH A 120 520 208 HOH HOH . F 6 HOH A 121 521 164 HOH HOH . F 6 HOH A 122 522 245 HOH HOH . F 6 HOH A 123 523 58 HOH HOH . F 6 HOH A 124 524 236 HOH HOH . F 6 HOH A 125 525 66 HOH HOH . F 6 HOH A 126 526 72 HOH HOH . F 6 HOH A 127 527 187 HOH HOH . F 6 HOH A 128 528 75 HOH HOH . F 6 HOH A 129 529 64 HOH HOH . F 6 HOH A 130 530 103 HOH HOH . F 6 HOH A 131 531 122 HOH HOH . F 6 HOH A 132 532 188 HOH HOH . F 6 HOH A 133 533 30 HOH HOH . F 6 HOH A 134 534 13 HOH HOH . F 6 HOH A 135 535 24 HOH HOH . F 6 HOH A 136 536 214 HOH HOH . F 6 HOH A 137 537 16 HOH HOH . F 6 HOH A 138 538 25 HOH HOH . F 6 HOH A 139 539 173 HOH HOH . F 6 HOH A 140 540 92 HOH HOH . F 6 HOH A 141 541 79 HOH HOH . F 6 HOH A 142 542 143 HOH HOH . F 6 HOH A 143 543 53 HOH HOH . F 6 HOH A 144 544 21 HOH HOH . F 6 HOH A 145 545 195 HOH HOH . F 6 HOH A 146 546 218 HOH HOH . F 6 HOH A 147 547 77 HOH HOH . F 6 HOH A 148 548 258 HOH HOH . F 6 HOH A 149 549 182 HOH HOH . F 6 HOH A 150 550 65 HOH HOH . F 6 HOH A 151 551 126 HOH HOH . F 6 HOH A 152 552 201 HOH HOH . F 6 HOH A 153 553 87 HOH HOH . F 6 HOH A 154 554 50 HOH HOH . F 6 HOH A 155 555 40 HOH HOH . F 6 HOH A 156 556 151 HOH HOH . F 6 HOH A 157 557 189 HOH HOH . F 6 HOH A 158 558 131 HOH HOH . F 6 HOH A 159 559 119 HOH HOH . F 6 HOH A 160 560 251 HOH HOH . F 6 HOH A 161 561 3 HOH HOH . F 6 HOH A 162 562 48 HOH HOH . F 6 HOH A 163 563 115 HOH HOH . F 6 HOH A 164 564 120 HOH HOH . F 6 HOH A 165 565 105 HOH HOH . F 6 HOH A 166 566 177 HOH HOH . F 6 HOH A 167 567 94 HOH HOH . F 6 HOH A 168 568 86 HOH HOH . F 6 HOH A 169 569 108 HOH HOH . F 6 HOH A 170 570 129 HOH HOH . F 6 HOH A 171 571 222 HOH HOH . F 6 HOH A 172 572 109 HOH HOH . F 6 HOH A 173 573 91 HOH HOH . F 6 HOH A 174 574 11 HOH HOH . F 6 HOH A 175 575 233 HOH HOH . F 6 HOH A 176 576 242 HOH HOH . F 6 HOH A 177 577 215 HOH HOH . F 6 HOH A 178 578 60 HOH HOH . F 6 HOH A 179 579 54 HOH HOH . F 6 HOH A 180 580 157 HOH HOH . F 6 HOH A 181 581 254 HOH HOH . F 6 HOH A 182 582 42 HOH HOH . F 6 HOH A 183 583 110 HOH HOH . F 6 HOH A 184 584 118 HOH HOH . F 6 HOH A 185 585 246 HOH HOH . F 6 HOH A 186 586 121 HOH HOH . F 6 HOH A 187 587 123 HOH HOH . F 6 HOH A 188 588 97 HOH HOH . F 6 HOH A 189 589 197 HOH HOH . F 6 HOH A 190 590 241 HOH HOH . F 6 HOH A 191 591 134 HOH HOH . F 6 HOH A 192 592 203 HOH HOH . F 6 HOH A 193 593 74 HOH HOH . F 6 HOH A 194 594 34 HOH HOH . F 6 HOH A 195 595 104 HOH HOH . F 6 HOH A 196 596 167 HOH HOH . F 6 HOH A 197 597 148 HOH HOH . F 6 HOH A 198 598 247 HOH HOH . F 6 HOH A 199 599 155 HOH HOH . F 6 HOH A 200 600 209 HOH HOH . F 6 HOH A 201 601 150 HOH HOH . F 6 HOH A 202 602 198 HOH HOH . F 6 HOH A 203 603 128 HOH HOH . F 6 HOH A 204 604 230 HOH HOH . F 6 HOH A 205 605 234 HOH HOH . F 6 HOH A 206 606 98 HOH HOH . F 6 HOH A 207 607 49 HOH HOH . F 6 HOH A 208 608 137 HOH HOH . F 6 HOH A 209 609 101 HOH HOH . F 6 HOH A 210 610 213 HOH HOH . F 6 HOH A 211 611 162 HOH HOH . F 6 HOH A 212 612 89 HOH HOH . F 6 HOH A 213 613 238 HOH HOH . F 6 HOH A 214 614 83 HOH HOH . F 6 HOH A 215 615 239 HOH HOH . F 6 HOH A 216 616 244 HOH HOH . F 6 HOH A 217 617 100 HOH HOH . F 6 HOH A 218 618 165 HOH HOH . F 6 HOH A 219 619 196 HOH HOH . F 6 HOH A 220 620 82 HOH HOH . F 6 HOH A 221 621 139 HOH HOH . F 6 HOH A 222 622 46 HOH HOH . F 6 HOH A 223 623 114 HOH HOH . F 6 HOH A 224 624 171 HOH HOH . F 6 HOH A 225 625 227 HOH HOH . F 6 HOH A 226 626 223 HOH HOH . F 6 HOH A 227 627 207 HOH HOH . F 6 HOH A 228 628 261 HOH HOH . F 6 HOH A 229 629 184 HOH HOH . F 6 HOH A 230 630 260 HOH HOH . F 6 HOH A 231 631 181 HOH HOH . F 6 HOH A 232 632 174 HOH HOH . F 6 HOH A 233 633 73 HOH HOH . F 6 HOH A 234 634 256 HOH HOH . F 6 HOH A 235 635 158 HOH HOH . F 6 HOH A 236 636 257 HOH HOH . F 6 HOH A 237 637 99 HOH HOH . F 6 HOH A 238 638 169 HOH HOH . F 6 HOH A 239 639 144 HOH HOH . F 6 HOH A 240 640 180 HOH HOH . F 6 HOH A 241 641 186 HOH HOH . F 6 HOH A 242 642 216 HOH HOH . F 6 HOH A 243 643 176 HOH HOH . F 6 HOH A 244 644 178 HOH HOH . F 6 HOH A 245 645 204 HOH HOH . F 6 HOH A 246 646 249 HOH HOH . F 6 HOH A 247 647 248 HOH HOH . F 6 HOH A 248 648 154 HOH HOH . F 6 HOH A 249 649 212 HOH HOH . F 6 HOH A 250 650 41 HOH HOH . F 6 HOH A 251 651 225 HOH HOH . F 6 HOH A 252 652 166 HOH HOH . F 6 HOH A 253 653 199 HOH HOH . F 6 HOH A 254 654 168 HOH HOH . F 6 HOH A 255 655 250 HOH HOH . F 6 HOH A 256 656 156 HOH HOH . F 6 HOH A 257 657 191 HOH HOH . F 6 HOH A 258 658 211 HOH HOH . F 6 HOH A 259 659 229 HOH HOH . F 6 HOH A 260 660 235 HOH HOH . F 6 HOH A 261 661 185 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 3.31 _atom_site.Cartn_y 21.092 _atom_site.Cartn_z 6.081 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #