data_7O0N
#
_model_server_result.job_id            -KyZf6ttNmlaJfIvj0MOcw 
_model_server_result.datetime_utc      '2024-11-24 15:59:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7o0n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    7O0N 
#
_exptl.entry_id    7O0N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              114.061 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Monothiophosphate 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7O0N 
_cell.length_a            44.12 
_cell.length_b            80.37 
_cell.length_c            136.83 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7O0N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 92 A GLU 126 1_555 E MG MG . A MG 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc2 A OE2 GLU 92 A GLU 126 1_555 E MG MG . A MG 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.677 ? 
metalc ? metalc3 A OD1 ASN 93 A ASN 127 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
metalc ? metalc4 C O3B CDP . A CDP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc5 C O2A CDP . A CDP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc6 D O4P TS6 . A TS6 302 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc7 B OD1 ASN 93 B ASN 127 1_555 K MG MG . B MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc8 I O1P TS6 . B TS6 303 1_555 K MG MG . B MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc9 J O1B CDP . B CDP 304 1_555 K MG MG . B MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc10 J O1A CDP . B CDP 304 1_555 K MG MG . B MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? 
metalc ? metalc11 K MG MG . B MG 305 1_555 M O HOH . B HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
#
_chem_comp.formula           'H3 O3 P S' 
_chem_comp.formula_weight    114.061 
_chem_comp.id                TS6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Monothiophosphate 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'phosphorothioic O,O,S-acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1P P TS6 doub 391 n n 
S2P P TS6 sing 392 n n 
P O3P TS6 sing 393 n n 
P O4P TS6 sing 394 n n 
S2P HS2P TS6 sing 395 n n 
O3P HO3P TS6 sing 396 n n 
O4P HO4P TS6 sing 397 n n 
#
_atom_sites.entry_id                     7O0N 
_atom_sites.fract_transf_matrix[1][1]    0.022665 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012442 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CDP A 1 301 301 CDP CDP . 
D 3 TS6 A 1 302 302 TS6 TS6 . 
E 4 MG A 1 303 303 MG MG . 
F 5 PEG A 1 304 304 PEG PEG . 
G 6 GOL B 1 301 301 GOL GOL . 
H 6 GOL B 1 302 302 GOL GOL . 
I 3 TS6 B 1 303 303 TS6 TS6 . 
J 2 CDP B 1 304 304 CDP CDP . 
K 4 MG B 1 305 305 MG MG . 
L 7 HOH A 1 401 401 HOH HOH . 
L 7 HOH A 2 402 402 HOH HOH . 
L 7 HOH A 3 403 403 HOH HOH . 
L 7 HOH A 4 404 404 HOH HOH . 
L 7 HOH A 5 405 405 HOH HOH . 
L 7 HOH A 6 406 406 HOH HOH . 
L 7 HOH A 7 407 407 HOH HOH . 
L 7 HOH A 8 408 408 HOH HOH . 
L 7 HOH A 9 409 409 HOH HOH . 
L 7 HOH A 10 410 410 HOH HOH . 
L 7 HOH A 11 411 411 HOH HOH . 
L 7 HOH A 12 412 412 HOH HOH . 
L 7 HOH A 13 413 413 HOH HOH . 
L 7 HOH A 14 414 414 HOH HOH . 
L 7 HOH A 15 415 415 HOH HOH . 
L 7 HOH A 16 416 416 HOH HOH . 
L 7 HOH A 17 417 417 HOH HOH . 
L 7 HOH A 18 418 418 HOH HOH . 
L 7 HOH A 19 419 419 HOH HOH . 
L 7 HOH A 20 420 420 HOH HOH . 
L 7 HOH A 21 421 421 HOH HOH . 
L 7 HOH A 22 422 422 HOH HOH . 
L 7 HOH A 23 423 423 HOH HOH . 
L 7 HOH A 24 424 424 HOH HOH . 
L 7 HOH A 25 425 425 HOH HOH . 
L 7 HOH A 26 426 426 HOH HOH . 
L 7 HOH A 27 427 427 HOH HOH . 
L 7 HOH A 28 428 428 HOH HOH . 
L 7 HOH A 29 429 429 HOH HOH . 
L 7 HOH A 30 430 430 HOH HOH . 
M 7 HOH B 1 401 401 HOH HOH . 
M 7 HOH B 2 402 402 HOH HOH . 
M 7 HOH B 3 403 403 HOH HOH . 
M 7 HOH B 4 404 404 HOH HOH . 
M 7 HOH B 5 405 405 HOH HOH . 
M 7 HOH B 6 406 406 HOH HOH . 
M 7 HOH B 7 407 407 HOH HOH . 
M 7 HOH B 8 408 408 HOH HOH . 
M 7 HOH B 9 409 409 HOH HOH . 
M 7 HOH B 10 410 410 HOH HOH . 
M 7 HOH B 11 411 411 HOH HOH . 
M 7 HOH B 12 412 412 HOH HOH . 
M 7 HOH B 13 413 413 HOH HOH . 
M 7 HOH B 14 414 414 HOH HOH . 
M 7 HOH B 15 415 415 HOH HOH . 
M 7 HOH B 16 416 416 HOH HOH . 
M 7 HOH B 17 417 417 HOH HOH . 
M 7 HOH B 18 418 418 HOH HOH . 
M 7 HOH B 19 419 419 HOH HOH . 
M 7 HOH B 20 420 420 HOH HOH . 
M 7 HOH B 21 421 421 HOH HOH . 
M 7 HOH B 22 422 422 HOH HOH . 
M 7 HOH B 23 423 423 HOH HOH . 
M 7 HOH B 24 424 424 HOH HOH . 
M 7 HOH B 25 425 425 HOH HOH . 
M 7 HOH B 26 426 426 HOH HOH . 
M 7 HOH B 27 427 427 HOH HOH . 
M 7 HOH B 28 428 428 HOH HOH . 
M 7 HOH B 29 429 429 HOH HOH . 
M 7 HOH B 30 430 430 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P TS6 . . . D 3 17.294 11.844 21.049 1 54.16 ? P TS6 302 A 1 
HETATM 2 O O1P TS6 . . . D 3 17.192 11.392 19.612 1 59.98 ? O1P TS6 302 A 1 
HETATM 3 S S2P TS6 . . . D 3 16.024 10.738 22.321 1 90.03 ? S2P TS6 302 A 1 
HETATM 4 O O3P TS6 . . . D 3 18.725 11.736 21.557 1 44.16 ? O3P TS6 302 A 1 
HETATM 5 O O4P TS6 . . . D 3 16.827 13.277 21.097 1 59.33 ? O4P TS6 302 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#