data_7O17
#
_model_server_result.job_id            C4B2FcI0xx48KHG8fG8t4g 
_model_server_result.datetime_utc      '2025-07-05 16:29:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7o17 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    7O17 
#
_exptl.entry_id    7O17 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7O17 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7O17 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG1 THR 43 B THR 43 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc2 B OE1 GLU 81 B GLU 81 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? 
metalc ? metalc3 F O1G ATP . B ATP 401 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc4 F O3G ATP . B ATP 401 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc5 F O2B ATP . B ATP 401 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc6 C OG1 THR 43 C THR 43 1_555 I MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc7 H O2G ATP . C ATP 401 1_555 I MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc8 H O3G ATP . C ATP 401 1_555 I MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc9 H O2B ATP . C ATP 401 1_555 I MG MG . C MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7O17 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 ATP B 1 401 2 ATP ATP . 
G 5 MG B 1 402 2 MG MG . 
H 4 ATP C 1 401 1 ATP ATP . 
I 5 MG C 1 402 1 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . H 4 131.844 132.961 162.493 1 209.53 ? PG ATP 401 C 1 
HETATM 2 O O1G ATP . . . H 4 131.313 134.367 162.413 1 209.53 ? O1G ATP 401 C 1 
HETATM 3 O O2G ATP . . . H 4 131.769 132.165 161.213 1 209.53 ? O2G ATP 401 C 1 
HETATM 4 O O3G ATP . . . H 4 131.411 132.233 163.735 1 209.53 ? O3G ATP 401 C 1 
HETATM 5 P PB ATP . . . H 4 134.438 132.033 163.039 1 209.53 ? PB ATP 401 C 1 
HETATM 6 O O1B ATP . . . H 4 135.118 132.371 164.336 1 209.53 ? O1B ATP 401 C 1 
HETATM 7 O O2B ATP . . . H 4 133.741 130.73 162.827 1 209.53 ? O2B ATP 401 C 1 
HETATM 8 O O3B ATP . . . H 4 133.407 133.204 162.71 1 209.53 ? O3B ATP 401 C 1 
HETATM 9 P PA ATP . . . H 4 136.184 131.185 160.941 1 209.53 ? PA ATP 401 C 1 
HETATM 10 O O1A ATP . . . H 4 135.768 131.42 159.518 1 209.53 ? O1A ATP 401 C 1 
HETATM 11 O O2A ATP . . . H 4 136.128 129.795 161.491 1 209.53 ? O2A ATP 401 C 1 
HETATM 12 O O3A ATP . . . H 4 135.489 132.296 161.865 1 209.53 ? O3A ATP 401 C 1 
HETATM 13 O O5' ATP . . . H 4 137.686 131.707 161.124 1 209.53 ? O5' ATP 401 C 1 
HETATM 14 C C5' ATP . . . H 4 138.709 131.364 160.206 1 209.53 ? C5' ATP 401 C 1 
HETATM 15 C C4' ATP . . . H 4 139.448 132.64 159.855 1 209.53 ? C4' ATP 401 C 1 
HETATM 16 O O4' ATP . . . H 4 140.29 132.385 158.74 1 209.53 ? O4' ATP 401 C 1 
HETATM 17 C C3' ATP . . . H 4 138.459 133.708 159.45 1 209.53 ? C3' ATP 401 C 1 
HETATM 18 O O3' ATP . . . H 4 138.726 134.911 160.165 1 209.53 ? O3' ATP 401 C 1 
HETATM 19 C C2' ATP . . . H 4 138.679 133.933 157.979 1 209.53 ? C2' ATP 401 C 1 
HETATM 20 O O2' ATP . . . H 4 138.967 135.307 157.728 1 209.53 ? O2' ATP 401 C 1 
HETATM 21 C C1' ATP . . . H 4 139.887 133.115 157.594 1 209.53 ? C1' ATP 401 C 1 
HETATM 22 N N9 ATP . . . H 4 139.496 132.114 156.589 1 209.53 ? N9 ATP 401 C 1 
HETATM 23 C C8 ATP . . . H 4 138.394 131.355 156.635 1 209.53 ? C8 ATP 401 C 1 
HETATM 24 N N7 ATP . . . H 4 138.329 130.527 155.567 1 209.53 ? N7 ATP 401 C 1 
HETATM 25 C C5 ATP . . . H 4 139.41 130.766 154.816 1 209.53 ? C5 ATP 401 C 1 
HETATM 26 C C6 ATP . . . H 4 139.967 130.236 153.561 1 209.53 ? C6 ATP 401 C 1 
HETATM 27 N N6 ATP . . . H 4 139.325 129.27 152.872 1 209.53 ? N6 ATP 401 C 1 
HETATM 28 N N1 ATP . . . H 4 141.134 130.748 153.124 1 209.53 ? N1 ATP 401 C 1 
HETATM 29 C C2 ATP . . . H 4 141.782 131.71 153.801 1 209.53 ? C2 ATP 401 C 1 
HETATM 30 N N3 ATP . . . H 4 141.336 132.232 154.953 1 209.53 ? N3 ATP 401 C 1 
HETATM 31 C C4 ATP . . . H 4 140.176 131.813 155.494 1 209.53 ? C4 ATP 401 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#