data_7O2H
#
_model_server_result.job_id            hBP88famkeW_AKxGR6mXSg 
_model_server_result.datetime_utc      '2025-09-13 03:24:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7o2h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    7O2H 
#
_exptl.entry_id    7O2H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              491.671 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-1-methyl-9-[6-(methylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7O2H 
_cell.length_a            64.06 
_cell.length_b            64.06 
_cell.length_c            225.1 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7O2H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    'P 32 2"' 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             233 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              338 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             283 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              388 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.024 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C28 H41 N7 O' 
_chem_comp.formula_weight    491.671 
_chem_comp.id                UZ2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-1-methyl-9-[6-(methylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C07 C08 UZ2 sing 364 n n 
C07 N06 UZ2 sing 365 n n 
C35 N06 UZ2 sing 366 n n 
C35 C36 UZ2 sing 367 n n 
C11 C08 UZ2 doub 368 n y 
C11 C12 UZ2 sing 369 n y 
C08 C09 UZ2 sing 370 n y 
N06 C05 UZ2 sing 371 n n 
C36 C02 UZ2 sing 372 n n 
C05 C04 UZ2 sing 373 n n 
C12 C13 UZ2 doub 374 n y 
C03 C02 UZ2 sing 375 n n 
C09 C10 UZ2 doub 376 n y 
C02 C04 UZ2 sing 377 n n 
C02 C01 UZ2 sing 378 n n 
C13 C10 UZ2 sing 379 n y 
C13 N14 UZ2 sing 380 n n 
C28 N27 UZ2 sing 381 n n 
C32 N14 UZ2 sing 382 n n 
C32 C33 UZ2 sing 383 n n 
N14 C15 UZ2 sing 384 n n 
O34 C33 UZ2 doub 385 n n 
C33 N30 UZ2 sing 386 n n 
C19 C20 UZ2 sing 387 n n 
C19 C16 UZ2 sing 388 n n 
N27 C26 UZ2 sing 389 n n 
C20 N21 UZ2 sing 390 n n 
C15 C16 UZ2 sing 391 n n 
N30 C16 UZ2 sing 392 n n 
N30 C31 UZ2 sing 393 n n 
C29 C26 UZ2 doub 394 n y 
C29 C22 UZ2 sing 395 n y 
C16 C17 UZ2 sing 396 n n 
C26 N25 UZ2 sing 397 n y 
N21 C22 UZ2 sing 398 n n 
N21 C18 UZ2 sing 399 n n 
C22 N23 UZ2 doub 400 n y 
N25 C24 UZ2 doub 401 n y 
C17 C18 UZ2 sing 402 n n 
N23 C24 UZ2 sing 403 n y 
C10 H1 UZ2 sing 404 n n 
C15 H2 UZ2 sing 405 n n 
C15 H3 UZ2 sing 406 n n 
C17 H4 UZ2 sing 407 n n 
C17 H5 UZ2 sing 408 n n 
C20 H6 UZ2 sing 409 n n 
C20 H7 UZ2 sing 410 n n 
C24 H8 UZ2 sing 411 n n 
C28 H9 UZ2 sing 412 n n 
C28 H10 UZ2 sing 413 n n 
C28 H11 UZ2 sing 414 n n 
C01 H12 UZ2 sing 415 n n 
C01 H13 UZ2 sing 416 n n 
C01 H14 UZ2 sing 417 n n 
C03 H15 UZ2 sing 418 n n 
C03 H16 UZ2 sing 419 n n 
C03 H17 UZ2 sing 420 n n 
C04 H18 UZ2 sing 421 n n 
C04 H19 UZ2 sing 422 n n 
C05 H20 UZ2 sing 423 n n 
C05 H21 UZ2 sing 424 n n 
C07 H22 UZ2 sing 425 n n 
C07 H23 UZ2 sing 426 n n 
C09 H24 UZ2 sing 427 n n 
C11 H25 UZ2 sing 428 n n 
C12 H26 UZ2 sing 429 n n 
C18 H27 UZ2 sing 430 n n 
C18 H28 UZ2 sing 431 n n 
C19 H29 UZ2 sing 432 n n 
C19 H30 UZ2 sing 433 n n 
C29 H31 UZ2 sing 434 n n 
C31 H32 UZ2 sing 435 n n 
C31 H33 UZ2 sing 436 n n 
C31 H34 UZ2 sing 437 n n 
C32 H35 UZ2 sing 438 n n 
C32 H36 UZ2 sing 439 n n 
C35 H37 UZ2 sing 440 n n 
C35 H38 UZ2 sing 441 n n 
C36 H39 UZ2 sing 442 n n 
C36 H40 UZ2 sing 443 n n 
N27 H42 UZ2 sing 444 n n 
#
_atom_sites.entry_id                     7O2H 
_atom_sites.fract_transf_matrix[1][1]    0.01561 
_atom_sites.fract_transf_matrix[1][2]    0.009013 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004442 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 UZ2 A 1 601 1 UZ2 LIG . 
D 4 ACT B 1 401 2 ACT ACT . 
E 5 HOH A 1 701 9 HOH HOH . 
E 5 HOH A 2 702 18 HOH HOH . 
E 5 HOH A 3 703 2 HOH HOH . 
E 5 HOH A 4 704 19 HOH HOH . 
E 5 HOH A 5 705 27 HOH HOH . 
E 5 HOH A 6 706 37 HOH HOH . 
E 5 HOH A 7 707 17 HOH HOH . 
E 5 HOH A 8 708 13 HOH HOH . 
E 5 HOH A 9 709 40 HOH HOH . 
E 5 HOH A 10 710 48 HOH HOH . 
E 5 HOH A 11 711 42 HOH HOH . 
E 5 HOH A 12 712 39 HOH HOH . 
E 5 HOH A 13 713 49 HOH HOH . 
E 5 HOH A 14 714 54 HOH HOH . 
F 5 HOH B 1 501 22 HOH HOH . 
F 5 HOH B 2 502 15 HOH HOH . 
F 5 HOH B 3 503 1 HOH HOH . 
F 5 HOH B 4 504 31 HOH HOH . 
F 5 HOH B 5 505 6 HOH HOH . 
F 5 HOH B 6 506 16 HOH HOH . 
F 5 HOH B 7 507 7 HOH HOH . 
F 5 HOH B 8 508 8 HOH HOH . 
F 5 HOH B 9 509 4 HOH HOH . 
F 5 HOH B 10 510 52 HOH HOH . 
F 5 HOH B 11 511 21 HOH HOH . 
F 5 HOH B 12 512 5 HOH HOH . 
F 5 HOH B 13 513 3 HOH HOH . 
F 5 HOH B 14 514 11 HOH HOH . 
F 5 HOH B 15 515 29 HOH HOH . 
F 5 HOH B 16 516 20 HOH HOH . 
F 5 HOH B 17 517 10 HOH HOH . 
F 5 HOH B 18 518 25 HOH HOH . 
F 5 HOH B 19 519 24 HOH HOH . 
F 5 HOH B 20 520 35 HOH HOH . 
F 5 HOH B 21 521 12 HOH HOH . 
F 5 HOH B 22 522 30 HOH HOH . 
F 5 HOH B 23 523 38 HOH HOH . 
F 5 HOH B 24 524 14 HOH HOH . 
F 5 HOH B 25 525 23 HOH HOH . 
F 5 HOH B 26 526 50 HOH HOH . 
F 5 HOH B 27 527 26 HOH HOH . 
F 5 HOH B 28 528 46 HOH HOH . 
F 5 HOH B 29 529 32 HOH HOH . 
F 5 HOH B 30 530 53 HOH HOH . 
F 5 HOH B 31 531 34 HOH HOH . 
F 5 HOH B 32 532 51 HOH HOH . 
F 5 HOH B 33 533 47 HOH HOH . 
F 5 HOH B 34 534 41 HOH HOH . 
F 5 HOH B 35 535 44 HOH HOH . 
F 5 HOH B 36 536 45 HOH HOH . 
F 5 HOH B 37 537 33 HOH HOH . 
F 5 HOH B 38 538 43 HOH HOH . 
F 5 HOH B 39 539 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 UZ2 . . . C 3 -42.646 32.169 23.379 1 75.45 ? C10 UZ2 601 A 1 
HETATM 2 C C13 UZ2 . . . C 3 -43.989 32.528 23.333 1 78.43 ? C13 UZ2 601 A 1 
HETATM 3 C C15 UZ2 . . . C 3 -43.835 34.037 25.398 1 78.74 ? C15 UZ2 601 A 1 
HETATM 4 C C17 UZ2 . . . C 3 -43.989 36.013 27.359 1 76.61 ? C17 UZ2 601 A 1 
HETATM 5 C C20 UZ2 . . . C 3 -41.978 36.381 25.234 1 68.5 ? C20 UZ2 601 A 1 
HETATM 6 C C22 UZ2 . . . C 3 -41.015 38.051 26.778 1 67.34 ? C22 UZ2 601 A 1 
HETATM 7 C C24 UZ2 . . . C 3 -39.767 39.377 28.236 1 70.03 ? C24 UZ2 601 A 1 
HETATM 8 C C26 UZ2 . . . C 3 -39.897 39.976 25.991 1 70.14 ? C26 UZ2 601 A 1 
HETATM 9 C C28 UZ2 . . . C 3 -40.582 41.343 23.969 1 72.75 ? C28 UZ2 601 A 1 
HETATM 10 C C01 UZ2 . . . C 3 -41.47 25.073 24.237 1 71.36 ? C01 UZ2 601 A 1 
HETATM 11 C C02 UZ2 . . . C 3 -42.338 25.498 23.063 1 75.11 ? C02 UZ2 601 A 1 
HETATM 12 C C03 UZ2 . . . C 3 -43.1 24.278 22.573 1 75.68 ? C03 UZ2 601 A 1 
HETATM 13 C C04 UZ2 . . . C 3 -43.375 26.563 23.506 1 75.58 ? C04 UZ2 601 A 1 
HETATM 14 C C05 UZ2 . . . C 3 -43.53 27.706 22.44 1 76.76 ? C05 UZ2 601 A 1 
HETATM 15 C C07 UZ2 . . . C 3 -42.556 29.112 21.066 1 73.53 ? C07 UZ2 601 A 1 
HETATM 16 C C08 UZ2 . . . C 3 -43.067 30.33 21.858 1 75.39 ? C08 UZ2 601 A 1 
HETATM 17 C C09 UZ2 . . . C 3 -42.178 31.071 22.639 1 75.75 ? C09 UZ2 601 A 1 
HETATM 18 C C11 UZ2 . . . C 3 -44.409 30.705 21.813 1 78.9 ? C11 UZ2 601 A 1 
HETATM 19 C C12 UZ2 . . . C 3 -44.872 31.791 22.55 1 78.2 ? C12 UZ2 601 A 1 
HETATM 20 C C16 UZ2 . . . C 3 -44.28 35.438 25.938 1 74.01 ? C16 UZ2 601 A 1 
HETATM 21 C C18 UZ2 . . . C 3 -42.497 36.217 27.603 1 72.87 ? C18 UZ2 601 A 1 
HETATM 22 C C19 UZ2 . . . C 3 -43.445 36.206 24.854 1 70.06 ? C19 UZ2 601 A 1 
HETATM 23 C C29 UZ2 . . . C 3 -40.695 38.885 25.747 1 67.82 ? C29 UZ2 601 A 1 
HETATM 24 C C31 UZ2 . . . C 3 -46.229 37.01 26.246 1 77.72 ? C31 UZ2 601 A 1 
HETATM 25 C C32 UZ2 . . . C 3 -45.995 33.814 24.085 1 82.56 ? C32 UZ2 601 A 1 
HETATM 26 C C33 UZ2 . . . C 3 -46.468 35.079 24.783 1 84.99 ? C33 UZ2 601 A 1 
HETATM 27 C C35 UZ2 . . . C 3 -41.895 27.11 21.178 1 69.63 ? C35 UZ2 601 A 1 
HETATM 28 C C36 UZ2 . . . C 3 -41.413 25.949 21.965 1 73.03 ? C36 UZ2 601 A 1 
HETATM 29 N N06 UZ2 . . . C 3 -42.364 28.086 21.887 1 73.25 ? N06 UZ2 601 A 1 
HETATM 30 N N14 UZ2 . . . C 3 -44.516 33.677 24.097 1 80.81 ? N14 UZ2 601 A 1 
HETATM 31 N N21 UZ2 . . . C 3 -41.864 36.893 26.539 1 70.33 ? N21 UZ2 601 A 1 
HETATM 32 N N23 UZ2 . . . C 3 -40.563 38.298 28.011 1 68.23 ? N23 UZ2 601 A 1 
HETATM 33 N N25 UZ2 . . . C 3 -39.429 40.225 27.212 1 67.96 ? N25 UZ2 601 A 1 
HETATM 34 N N27 UZ2 . . . C 3 -39.546 40.871 24.887 1 71.24 ? N27 UZ2 601 A 1 
HETATM 35 N N30 UZ2 . . . C 3 -45.643 35.801 25.664 1 79.2 ? N30 UZ2 601 A 1 
HETATM 36 O O34 UZ2 . . . C 3 -47.581 35.474 24.582 1 76.7 ? O34 UZ2 601 A 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           36 
#