data_7O2I # _model_server_result.job_id eThNaoBMW9SQHi7v6Qur4g _model_server_result.datetime_utc '2025-09-12 05:52:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o2i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 7O2I # _exptl.entry_id 7O2I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.537 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[[6-[(cyclohexylmethylamino)methyl]imidazo[1,2-a]pyridin-2-yl]methyl]-4-oxidanylidene-1~{H}-pyrido[1,2-a]pyrimidine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7O2I _cell.length_a 64.094 _cell.length_b 64.094 _cell.length_c 225.302 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O2I _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 234 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 338 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 284 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 388 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.053 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C25 H29 N6 O2' _chem_comp.formula_weight 445.537 _chem_comp.id V22 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[[6-[(cyclohexylmethylamino)methyl]imidazo[1,2-a]pyridin-2-yl]methyl]-4-oxidanylidene-1~{H}-pyrido[1,2-a]pyrimidine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C15 V22 sing 367 n n C14 C13 V22 sing 368 n n C15 C16 V22 sing 369 n n C10 N11 V22 sing 370 n n C10 C9 V22 sing 371 n n C12 C13 V22 sing 372 n n C12 N11 V22 sing 373 n n C13 C18 V22 sing 374 n n C19 C9 V22 sing 375 n y C19 C20 V22 doub 376 n y C30 C29 V22 doub 377 n y C30 C31 V22 sing 378 n y C9 C8 V22 doub 379 n y C16 C17 V22 sing 380 n n C20 C21 V22 sing 381 n y C29 C28 V22 sing 382 n y C31 C32 V22 doub 383 n y C18 C17 V22 sing 384 n n C8 N7 V22 sing 385 n y C21 N7 V22 sing 386 n y C21 N22 V22 doub 387 n y C28 N27 V22 doub 388 n y N7 C6 V22 sing 389 n y C32 N27 V22 sing 390 n y C32 N33 V22 sing 391 n n N22 C5 V22 sing 392 n y N27 C25 V22 sing 393 n n N33 C23 V22 sing 394 n n C6 C5 V22 doub 395 n y C5 C4 V22 sing 396 n n N3 C4 V22 sing 397 n n N3 C2 V22 sing 398 n n C25 O26 V22 doub 399 n n C25 C24 V22 sing 400 n n C23 C24 V22 doub 401 n n C23 C2 V22 sing 402 n n C2 O1 V22 doub 403 n n C6 H1 V22 sing 404 n n C20 H2 V22 sing 405 n n C19 H3 V22 sing 406 n n C30 H4 V22 sing 407 n n C31 H5 V22 sing 408 n n C29 H6 V22 sing 409 n n C24 H7 V22 sing 410 n n C8 H8 V22 sing 411 n n C28 H9 V22 sing 412 n n C16 H10 V22 sing 413 n n C16 H11 V22 sing 414 n n C15 H12 V22 sing 415 n n C15 H13 V22 sing 416 n n C17 H14 V22 sing 417 n n C17 H15 V22 sing 418 n n C14 H16 V22 sing 419 n n C14 H17 V22 sing 420 n n C18 H18 V22 sing 421 n n C18 H19 V22 sing 422 n n C13 H20 V22 sing 423 n n C4 H21 V22 sing 424 n n C4 H22 V22 sing 425 n n C10 H23 V22 sing 426 n n C10 H24 V22 sing 427 n n C12 H25 V22 sing 428 n n C12 H26 V22 sing 429 n n N33 H27 V22 sing 430 n n N3 H28 V22 sing 431 n n N11 H29 V22 sing 432 n n # _atom_sites.entry_id 7O2I _atom_sites.fract_transf_matrix[1][1] 0.015602 _atom_sites.fract_transf_matrix[1][2] 0.009008 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V22 A 1 601 1 V22 UNL . D 4 DMS B 1 401 2 DMS DMS . E 5 HOH A 1 701 12 HOH HOH . E 5 HOH A 2 702 3 HOH HOH . E 5 HOH A 3 703 22 HOH HOH . E 5 HOH A 4 704 8 HOH HOH . E 5 HOH A 5 705 2 HOH HOH . E 5 HOH A 6 706 14 HOH HOH . E 5 HOH A 7 707 11 HOH HOH . E 5 HOH A 8 708 20 HOH HOH . E 5 HOH A 9 709 7 HOH HOH . E 5 HOH A 10 710 5 HOH HOH . E 5 HOH A 11 711 6 HOH HOH . E 5 HOH A 12 712 4 HOH HOH . F 5 HOH B 1 501 19 HOH HOH . F 5 HOH B 2 502 23 HOH HOH . F 5 HOH B 3 503 15 HOH HOH . F 5 HOH B 4 504 10 HOH HOH . F 5 HOH B 5 505 1 HOH HOH . F 5 HOH B 6 506 9 HOH HOH . F 5 HOH B 7 507 18 HOH HOH . F 5 HOH B 8 508 17 HOH HOH . F 5 HOH B 9 509 13 HOH HOH . F 5 HOH B 10 510 16 HOH HOH . F 5 HOH B 11 511 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 V22 . . . C 3 -42.224 33.322 25.412 1 57.17 ? C6 V22 601 A 1 HETATM 2 C C5 V22 . . . C 3 -43.014 34.412 25.684 1 53.66 ? C5 V22 601 A 1 HETATM 3 C C21 V22 . . . C 3 -43.923 33.433 24.029 1 57.05 ? C21 V22 601 A 1 HETATM 4 C C20 V22 . . . C 3 -44.696 32.97 22.953 1 55.94 ? C20 V22 601 A 1 HETATM 5 C C19 V22 . . . C 3 -44.334 31.863 22.299 1 55.88 ? C19 V22 601 A 1 HETATM 6 C C30 V22 . . . C 3 -41.033 41.335 22.427 1 44.01 ? C30 V22 601 A 1 HETATM 7 C C31 V22 . . . C 3 -41.512 40.274 23.075 1 46.96 ? C31 V22 601 A 1 HETATM 8 C C29 V22 . . . C 3 -40.046 42.142 23.032 1 45.64 ? C29 V22 601 A 1 HETATM 9 C C24 V22 . . . C 3 -40.132 39.331 26.888 1 51.04 ? C24 V22 601 A 1 HETATM 10 C C8 V22 . . . C 3 -42.445 31.567 23.681 1 57.73 ? C8 V22 601 A 1 HETATM 11 C C28 V22 . . . C 3 -39.614 41.837 24.254 1 49.13 ? C28 V22 601 A 1 HETATM 12 C C9 V22 . . . C 3 -43.174 31.118 22.665 1 56.04 ? C9 V22 601 A 1 HETATM 13 C C23 V22 . . . C 3 -41.057 38.619 26.248 1 50.38 ? C23 V22 601 A 1 HETATM 14 C C32 V22 . . . C 3 -41.04 39.927 24.417 1 47.27 ? C32 V22 601 A 1 HETATM 15 C C25 V22 . . . C 3 -39.56 40.511 26.225 1 51.51 ? C25 V22 601 A 1 HETATM 16 C C2 V22 . . . C 3 -41.56 37.457 27.018 1 51.76 ? C2 V22 601 A 1 HETATM 17 C C16 V22 . . . C 3 -41.678 23.862 22.76 1 69.39 ? C16 V22 601 A 1 HETATM 18 C C15 V22 . . . C 3 -41.45 24.579 21.463 1 67.07 ? C15 V22 601 A 1 HETATM 19 C C17 V22 . . . C 3 -42.087 24.848 23.823 1 67.88 ? C17 V22 601 A 1 HETATM 20 C C14 V22 . . . C 3 -42.751 25.199 21.011 1 66.29 ? C14 V22 601 A 1 HETATM 21 C C18 V22 . . . C 3 -43.341 25.603 23.425 1 66.07 ? C18 V22 601 A 1 HETATM 22 C C13 V22 . . . C 3 -43.323 26.186 22.015 1 61.8 ? C13 V22 601 A 1 HETATM 23 C C4 V22 . . . C 3 -42.847 35.428 26.722 1 53.74 ? C4 V22 601 A 1 HETATM 24 C C10 V22 . . . C 3 -42.837 29.888 21.886 1 57.51 ? C10 V22 601 A 1 HETATM 25 C C12 V22 . . . C 3 -42.493 27.449 21.99 1 58.76 ? C12 V22 601 A 1 HETATM 26 N N22 V22 . . . C 3 -44.063 34.474 24.818 1 55.34 ? N22 V22 601 A 1 HETATM 27 N N33 V22 . . . C 3 -41.544 38.889 25.004 1 47.39 ? N33 V22 601 A 1 HETATM 28 N N7 V22 . . . C 3 -42.816 32.703 24.35 1 58.5 ? N7 V22 601 A 1 HETATM 29 N N27 V22 . . . C 3 -40.083 40.753 24.965 1 50.38 ? N27 V22 601 A 1 HETATM 30 N N3 V22 . . . C 3 -42.028 36.479 26.185 1 54.76 ? N3 V22 601 A 1 HETATM 31 N N11 V22 . . . C 3 -43.28 28.605 22.525 1 56.74 ? N11 V22 601 A 1 HETATM 32 O O26 V22 . . . C 3 -38.705 41.184 26.786 1 52.97 ? O26 V22 601 A 1 HETATM 33 O O1 V22 . . . C 3 -41.556 37.414 28.243 1 50.77 ? O1 V22 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #