data_7O2M # _model_server_result.job_id TydBX3VJKmnQ7w2rXqtCLw _model_server_result.datetime_utc '2025-01-25 13:57:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o2m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7O2M # _exptl.entry_id 7O2M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 701.86 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(3~{S},6~{S},9~{S},19~{R})-3,6-bis(4-azanylbutyl)-2,5,8,12,15,18-hexakis(oxidanylidene)-9-(phenylmethyl)-1,4,7,11,14,17-hexazacyclotricos-19-yl]guanidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7O2M _cell.length_a 42.274 _cell.length_b 42.274 _cell.length_c 216.109 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O2M _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall 'P 4cw 2c' _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C33 H55 N11 O6' _chem_comp.formula_weight 701.86 _chem_comp.id UZZ _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(3~{S},6~{S},9~{S},19~{R})-3,6-bis(4-azanylbutyl)-2,5,8,12,15,18-hexakis(oxidanylidene)-9-(phenylmethyl)-1,4,7,11,14,17-hexazacyclotricos-19-yl]guanidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UZZ doub 358 n n N C2 UZZ sing 359 n n N C1 UZZ sing 360 n n C32 N10 UZZ sing 361 n n C32 C31 UZZ sing 362 n n N10 C UZZ sing 363 n n C2 N2 UZZ sing 364 n n C3 C1 UZZ sing 365 n n C3 C4 UZZ sing 366 n n C31 N9 UZZ sing 367 n n C31 O1 UZZ doub 368 n n C1 C UZZ sing 369 n n C O UZZ doub 370 n n N9 C30 UZZ sing 371 n n C5 C4 UZZ sing 372 n n C5 C6 UZZ sing 373 n n C30 C29 UZZ sing 374 n n C6 N3 UZZ sing 375 n n C29 N8 UZZ sing 376 n n C29 O2 UZZ doub 377 n n O3 C19 UZZ doub 378 n n N8 C28 UZZ sing 379 n n N3 C7 UZZ sing 380 n n O5 C7 UZZ doub 381 n n C7 C8 UZZ sing 382 n n C19 C20 UZZ sing 383 n n C19 N7 UZZ sing 384 n n C27 C26 UZZ doub 385 n y C27 C22 UZZ sing 386 n y C28 C20 UZZ sing 387 n n C14 C13 UZZ sing 388 n n C14 N7 UZZ sing 389 n n C14 C15 UZZ sing 390 n n C21 C20 UZZ sing 391 n n C21 C22 UZZ sing 392 n n O4 C13 UZZ doub 393 n n C26 C25 UZZ sing 394 n y C13 N5 UZZ sing 395 n n N5 C8 UZZ sing 396 n n C15 C16 UZZ sing 397 n n C22 C23 UZZ doub 398 n y C8 C9 UZZ sing 399 n n C25 C24 UZZ doub 400 n y C9 C10 UZZ sing 401 n n C23 C24 UZZ sing 402 n y C16 C17 UZZ sing 403 n n C17 C18 UZZ sing 404 n n C10 C11 UZZ sing 405 n n C11 C12 UZZ sing 406 n n C18 N6 UZZ sing 407 n n C12 N4 UZZ sing 408 n n N1 H1 UZZ sing 409 n n C8 H2 UZZ sing 410 n n N2 H3 UZZ sing 411 n n N2 H4 UZZ sing 412 n n C9 H5 UZZ sing 413 n n C9 H6 UZZ sing 414 n n C1 H7 UZZ sing 415 n n C5 H8 UZZ sing 416 n n C5 H9 UZZ sing 417 n n C6 H10 UZZ sing 418 n n C6 H11 UZZ sing 419 n n N3 H12 UZZ sing 420 n n C4 H13 UZZ sing 421 n n C4 H14 UZZ sing 422 n n C3 H15 UZZ sing 423 n n C3 H16 UZZ sing 424 n n N4 H17 UZZ sing 425 n n N4 H18 UZZ sing 426 n n N H20 UZZ sing 427 n n C10 H21 UZZ sing 428 n n C10 H22 UZZ sing 429 n n C11 H23 UZZ sing 430 n n C11 H24 UZZ sing 431 n n C12 H25 UZZ sing 432 n n C12 H26 UZZ sing 433 n n C14 H27 UZZ sing 434 n n C15 H28 UZZ sing 435 n n C15 H29 UZZ sing 436 n n C16 H30 UZZ sing 437 n n C16 H31 UZZ sing 438 n n C17 H32 UZZ sing 439 n n C17 H33 UZZ sing 440 n n C18 H34 UZZ sing 441 n n C18 H35 UZZ sing 442 n n C20 H36 UZZ sing 443 n n C21 H37 UZZ sing 444 n n C21 H38 UZZ sing 445 n n C23 H39 UZZ sing 446 n n C24 H40 UZZ sing 447 n n C25 H41 UZZ sing 448 n n C26 H42 UZZ sing 449 n n C27 H43 UZZ sing 450 n n C28 H44 UZZ sing 451 n n C28 H45 UZZ sing 452 n n C30 H46 UZZ sing 453 n n C30 H47 UZZ sing 454 n n C32 H48 UZZ sing 455 n n C32 H49 UZZ sing 456 n n N10 H50 UZZ sing 457 n n N5 H51 UZZ sing 458 n n N6 H52 UZZ sing 459 n n N6 H53 UZZ sing 460 n n N7 H55 UZZ sing 461 n n N8 H56 UZZ sing 462 n n N9 H57 UZZ sing 463 n n # _atom_sites.entry_id 7O2M _atom_sites.fract_transf_matrix[1][1] 0.023655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UZZ B 1 201 1 UZZ XXX . D 4 HOH A 1 101 51 HOH HOH . D 4 HOH A 2 102 65 HOH HOH . D 4 HOH A 3 103 15 HOH HOH . D 4 HOH A 4 104 99 HOH HOH . D 4 HOH A 5 105 66 HOH HOH . D 4 HOH A 6 106 20 HOH HOH . D 4 HOH A 7 107 103 HOH HOH . D 4 HOH A 8 108 34 HOH HOH . D 4 HOH A 9 109 16 HOH HOH . D 4 HOH A 10 110 27 HOH HOH . D 4 HOH A 11 111 71 HOH HOH . D 4 HOH A 12 112 5 HOH HOH . D 4 HOH A 13 113 7 HOH HOH . D 4 HOH A 14 114 81 HOH HOH . D 4 HOH A 15 115 14 HOH HOH . D 4 HOH A 16 116 77 HOH HOH . D 4 HOH A 17 117 33 HOH HOH . D 4 HOH A 18 118 82 HOH HOH . D 4 HOH A 19 119 114 HOH HOH . D 4 HOH A 20 120 18 HOH HOH . D 4 HOH A 21 121 109 HOH HOH . D 4 HOH A 22 122 111 HOH HOH . D 4 HOH A 23 123 31 HOH HOH . D 4 HOH A 24 124 55 HOH HOH . D 4 HOH A 25 125 26 HOH HOH . D 4 HOH A 26 126 39 HOH HOH . D 4 HOH A 27 127 47 HOH HOH . D 4 HOH A 28 128 113 HOH HOH . D 4 HOH A 29 129 126 HOH HOH . E 4 HOH B 1 301 96 HOH HOH . E 4 HOH B 2 302 116 HOH HOH . E 4 HOH B 3 303 129 HOH HOH . E 4 HOH B 4 304 67 HOH HOH . E 4 HOH B 5 305 45 HOH HOH . E 4 HOH B 6 306 9 HOH HOH . E 4 HOH B 7 307 133 HOH HOH . E 4 HOH B 8 308 86 HOH HOH . E 4 HOH B 9 309 62 HOH HOH . E 4 HOH B 10 310 43 HOH HOH . E 4 HOH B 11 311 12 HOH HOH . E 4 HOH B 12 312 105 HOH HOH . E 4 HOH B 13 313 110 HOH HOH . E 4 HOH B 14 314 88 HOH HOH . E 4 HOH B 15 315 1 HOH HOH . E 4 HOH B 16 316 3 HOH HOH . E 4 HOH B 17 317 11 HOH HOH . E 4 HOH B 18 318 41 HOH HOH . E 4 HOH B 19 319 95 HOH HOH . E 4 HOH B 20 320 2 HOH HOH . E 4 HOH B 21 321 98 HOH HOH . E 4 HOH B 22 322 19 HOH HOH . E 4 HOH B 23 323 89 HOH HOH . E 4 HOH B 24 324 38 HOH HOH . E 4 HOH B 25 325 63 HOH HOH . E 4 HOH B 26 326 94 HOH HOH . E 4 HOH B 27 327 93 HOH HOH . E 4 HOH B 28 328 32 HOH HOH . E 4 HOH B 29 329 36 HOH HOH . E 4 HOH B 30 330 127 HOH HOH . E 4 HOH B 31 331 104 HOH HOH . E 4 HOH B 32 332 28 HOH HOH . E 4 HOH B 33 333 8 HOH HOH . E 4 HOH B 34 334 44 HOH HOH . E 4 HOH B 35 335 92 HOH HOH . E 4 HOH B 36 336 90 HOH HOH . E 4 HOH B 37 337 22 HOH HOH . E 4 HOH B 38 338 13 HOH HOH . E 4 HOH B 39 339 121 HOH HOH . E 4 HOH B 40 340 53 HOH HOH . E 4 HOH B 41 341 58 HOH HOH . E 4 HOH B 42 342 74 HOH HOH . E 4 HOH B 43 343 48 HOH HOH . E 4 HOH B 44 344 68 HOH HOH . E 4 HOH B 45 345 100 HOH HOH . E 4 HOH B 46 346 25 HOH HOH . E 4 HOH B 47 347 69 HOH HOH . E 4 HOH B 48 348 60 HOH HOH . E 4 HOH B 49 349 112 HOH HOH . E 4 HOH B 50 350 10 HOH HOH . E 4 HOH B 51 351 125 HOH HOH . E 4 HOH B 52 352 59 HOH HOH . E 4 HOH B 53 353 75 HOH HOH . E 4 HOH B 54 354 4 HOH HOH . E 4 HOH B 55 355 84 HOH HOH . E 4 HOH B 56 356 29 HOH HOH . E 4 HOH B 57 357 40 HOH HOH . E 4 HOH B 58 358 50 HOH HOH . E 4 HOH B 59 359 97 HOH HOH . E 4 HOH B 60 360 21 HOH HOH . E 4 HOH B 61 361 87 HOH HOH . E 4 HOH B 62 362 73 HOH HOH . E 4 HOH B 63 363 123 HOH HOH . E 4 HOH B 64 364 17 HOH HOH . E 4 HOH B 65 365 24 HOH HOH . E 4 HOH B 66 366 91 HOH HOH . E 4 HOH B 67 367 101 HOH HOH . E 4 HOH B 68 368 30 HOH HOH . E 4 HOH B 69 369 70 HOH HOH . E 4 HOH B 70 370 76 HOH HOH . E 4 HOH B 71 371 118 HOH HOH . E 4 HOH B 72 372 23 HOH HOH . E 4 HOH B 73 373 102 HOH HOH . E 4 HOH B 74 374 49 HOH HOH . E 4 HOH B 75 375 72 HOH HOH . E 4 HOH B 76 376 54 HOH HOH . E 4 HOH B 77 377 61 HOH HOH . E 4 HOH B 78 378 46 HOH HOH . E 4 HOH B 79 379 57 HOH HOH . E 4 HOH B 80 380 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UZZ . . . C 3 2.34 -4.839 -20.899 1 34.03 ? N1 UZZ 201 B 1 HETATM 2 C C7 UZZ . . . C 3 9.148 -5.491 -14.967 1 54.26 ? C7 UZZ 201 B 1 HETATM 3 C C8 UZZ . . . C 3 8.432 -4.932 -13.735 1 45.7 ? C8 UZZ 201 B 1 HETATM 4 N N2 UZZ . . . C 3 2.524 -5.594 -18.547 1 23.96 ? N2 UZZ 201 B 1 HETATM 5 C C9 UZZ . . . C 3 8.713 -5.783 -12.481 1 30.97 ? C9 UZZ 201 B 1 HETATM 6 O O1 UZZ . . . C 3 4.62 -10.971 -18.347 1 86.22 ? O1 UZZ 201 B 1 HETATM 7 C C1 UZZ . . . C 3 5.38 -5.534 -18.846 1 45.49 ? C1 UZZ 201 B 1 HETATM 8 O O5 UZZ . . . C 3 9.241 -6.702 -15.138 1 40.04 ? O5 UZZ 201 B 1 HETATM 9 C C5 UZZ . . . C 3 9.165 -4.636 -18.261 1 28.67 ? C5 UZZ 201 B 1 HETATM 10 C C6 UZZ . . . C 3 10.148 -4.962 -17.145 1 34.67 ? C6 UZZ 201 B 1 HETATM 11 N N3 UZZ . . . C 3 9.615 -4.595 -15.839 1 38.32 ? N3 UZZ 201 B 1 HETATM 12 C C4 UZZ . . . C 3 7.816 -5.336 -18.097 1 42.26 ? C4 UZZ 201 B 1 HETATM 13 O O4 UZZ . . . C 3 6.864 -2.633 -14.302 1 29.5 ? O4 UZZ 201 B 1 HETATM 14 C C3 UZZ . . . C 3 6.772 -4.984 -19.171 1 32.29 ? C3 UZZ 201 B 1 HETATM 15 O O3 UZZ . . . C 3 3.592 -5.88 -15.947 1 34.49 ? O3 UZZ 201 B 1 HETATM 16 C C2 UZZ . . . C 3 3.071 -5.186 -19.707 1 36.03 ? C2 UZZ 201 B 1 HETATM 17 N N4 UZZ . . . C 3 8.566 -2.165 -9.035 1 38.93 ? N4 UZZ 201 B 1 HETATM 18 N N UZZ . . . C 3 4.421 -5.092 -19.845 1 43.56 ? N UZZ 201 B 1 HETATM 19 C C UZZ . . . C 3 5.413 -7.06 -18.702 1 47.15 ? C UZZ 201 B 1 HETATM 20 O O UZZ . . . C 3 5.646 -7.595 -17.609 1 35.54 ? O UZZ 201 B 1 HETATM 21 C C10 UZZ . . . C 3 8.062 -5.195 -11.243 1 25.63 ? C10 UZZ 201 B 1 HETATM 22 C C11 UZZ . . . C 3 8.67 -3.87 -10.819 1 28.28 ? C11 UZZ 201 B 1 HETATM 23 C C12 UZZ . . . C 3 7.828 -3.221 -9.729 1 41.7 ? C12 UZZ 201 B 1 HETATM 24 C C13 UZZ . . . C 3 6.333 -3.746 -14.247 1 42.72 ? C13 UZZ 201 B 1 HETATM 25 C C14 UZZ . . . C 3 4.832 -3.907 -14.485 1 36.29 ? C14 UZZ 201 B 1 HETATM 26 C C15 UZZ . . . C 3 4.029 -2.731 -13.922 1 48.73 ? C15 UZZ 201 B 1 HETATM 27 C C16 UZZ . . . C 3 3.715 -2.835 -12.436 1 42.81 ? C16 UZZ 201 B 1 HETATM 28 C C17 UZZ . . . C 3 2.814 -1.721 -11.946 1 49.34 ? C17 UZZ 201 B 1 HETATM 29 C C18 UZZ . . . C 3 2.702 -1.705 -10.434 1 69.32 ? C18 UZZ 201 B 1 HETATM 30 C C19 UZZ . . . C 3 3.69 -6.036 -14.736 1 58.84 ? C19 UZZ 201 B 1 HETATM 31 C C20 UZZ . . . C 3 3.065 -7.219 -14.03 1 42.23 ? C20 UZZ 201 B 1 HETATM 32 C C21 UZZ . . . C 3 1.561 -7.226 -14.309 1 38.57 ? C21 UZZ 201 B 1 HETATM 33 C C22 UZZ . . . C 3 0.853 -5.988 -13.814 1 48.71 ? C22 UZZ 201 B 1 HETATM 34 C C23 UZZ . . . C 3 0.767 -5.712 -12.454 1 52.58 ? C23 UZZ 201 B 1 HETATM 35 C C24 UZZ . . . C 3 0.151 -4.556 -12.004 1 53.13 ? C24 UZZ 201 B 1 HETATM 36 C C25 UZZ . . . C 3 -0.39 -3.664 -12.905 1 41.18 ? C25 UZZ 201 B 1 HETATM 37 C C26 UZZ . . . C 3 -0.322 -3.929 -14.25 1 46.69 ? C26 UZZ 201 B 1 HETATM 38 C C27 UZZ . . . C 3 0.293 -5.085 -14.705 1 48.52 ? C27 UZZ 201 B 1 HETATM 39 C C28 UZZ . . . C 3 3.671 -8.528 -14.542 1 40.06 ? C28 UZZ 201 B 1 HETATM 40 C C29 UZZ . . . C 3 2.38 -9.675 -16.296 1 50.94 ? C29 UZZ 201 B 1 HETATM 41 C C30 UZZ . . . C 3 2.154 -9.83 -17.791 1 43.16 ? C30 UZZ 201 B 1 HETATM 42 C C31 UZZ . . . C 3 4.333 -9.887 -18.855 1 59.17 ? C31 UZZ 201 B 1 HETATM 43 C C32 UZZ . . . C 3 5.279 -9.205 -19.827 1 45.4 ? C32 UZZ 201 B 1 HETATM 44 N N10 UZZ . . . C 3 5.186 -7.759 -19.815 1 41.07 ? N10 UZZ 201 B 1 HETATM 45 N N5 UZZ . . . C 3 7.005 -4.881 -14.007 1 34.31 ? N5 UZZ 201 B 1 HETATM 46 N N6 UZZ . . . C 3 1.687 -0.751 -9.983 1 76.85 ? N6 UZZ 201 B 1 HETATM 47 N N7 UZZ . . . C 3 4.33 -5.164 -13.952 1 33.84 ? N7 UZZ 201 B 1 HETATM 48 N N8 UZZ . . . C 3 3.324 -8.806 -15.934 1 60.2 ? N8 UZZ 201 B 1 HETATM 49 N N9 UZZ . . . C 3 3.188 -9.25 -18.618 1 51.7 ? N9 UZZ 201 B 1 HETATM 50 O O2 UZZ . . . C 3 1.719 -10.323 -15.488 1 66.32 ? O2 UZZ 201 B 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 50 #