data_7O2R # _model_server_result.job_id vEEXLrTzIJzYmLPSC2XJ6w _model_server_result.datetime_utc '2025-01-10 22:18:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o2r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":805}' # _entry.id 7O2R # _exptl.entry_id 7O2R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7O2R _cell.length_a 51.966 _cell.length_b 84.212 _cell.length_c 94.977 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O2R _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 177 A ASP 610 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc2 A OD1 ASP 177 A ASP 610 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc3 A OD1 ASP 179 A ASP 612 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc4 A OD2 ASP 179 A ASP 612 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc5 A O ASP 179 A ASP 612 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc6 A ND1 HIS 181 A HIS 614 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc7 A O HIS 181 A HIS 614 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? metalc ? metalc8 A O PHE 190 A PHE 623 1_555 J K K . A K 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc9 A O ASP 193 A ASP 626 1_555 J K K . A K 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc10 A O VAL 196 A VAL 629 1_555 J K K . A K 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc11 A OG SER 200 A SER 633 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc12 A O LEU 201 A LEU 634 1_555 K K K . A K 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc13 A O TYR 229 A TYR 662 1_555 J K K . A K 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc14 A OD2 ASP 272 A ASP 705 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc15 B N1 V05 . A V05 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc16 B O2 V05 . A V05 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc17 C ZN ZN . A ZN 802 1_555 M O HOH . A HOH 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc18 J K K . A K 809 1_555 M O HOH . A HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc19 J K K . A K 809 1_555 M O HOH . A HOH 947 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7O2R _atom_sites.fract_transf_matrix[1][1] 0.019243 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011875 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 V05 A 1 801 800 V05 DRG . C 3 ZN A 1 802 810 ZN ZN . D 4 IOD A 1 803 820 IOD IOD . E 4 IOD A 1 804 821 IOD IOD . F 4 IOD A 1 805 822 IOD IOD . G 4 IOD A 1 806 823 IOD IOD . H 4 IOD A 1 807 824 IOD IOD . I 4 IOD A 1 808 825 IOD IOD . J 5 K A 1 809 830 K K . K 5 K A 1 810 831 K K . L 6 PEG A 1 811 840 PEG PEG . M 7 HOH A 1 901 96 HOH HOH . M 7 HOH A 2 902 90 HOH HOH . M 7 HOH A 3 903 44 HOH HOH . M 7 HOH A 4 904 87 HOH HOH . M 7 HOH A 5 905 95 HOH HOH . M 7 HOH A 6 906 64 HOH HOH . M 7 HOH A 7 907 74 HOH HOH . M 7 HOH A 8 908 82 HOH HOH . M 7 HOH A 9 909 75 HOH HOH . M 7 HOH A 10 910 92 HOH HOH . M 7 HOH A 11 911 79 HOH HOH . M 7 HOH A 12 912 24 HOH HOH . M 7 HOH A 13 913 72 HOH HOH . M 7 HOH A 14 914 55 HOH HOH . M 7 HOH A 15 915 49 HOH HOH . M 7 HOH A 16 916 53 HOH HOH . M 7 HOH A 17 917 12 HOH HOH . M 7 HOH A 18 918 10 HOH HOH . M 7 HOH A 19 919 36 HOH HOH . M 7 HOH A 20 920 16 HOH HOH . M 7 HOH A 21 921 4 HOH HOH . M 7 HOH A 22 922 18 HOH HOH . M 7 HOH A 23 923 73 HOH HOH . M 7 HOH A 24 924 65 HOH HOH . M 7 HOH A 25 925 71 HOH HOH . M 7 HOH A 26 926 39 HOH HOH . M 7 HOH A 27 927 51 HOH HOH . M 7 HOH A 28 928 32 HOH HOH . M 7 HOH A 29 929 81 HOH HOH . M 7 HOH A 30 930 22 HOH HOH . M 7 HOH A 31 931 41 HOH HOH . M 7 HOH A 32 932 50 HOH HOH . M 7 HOH A 33 933 1 HOH HOH . M 7 HOH A 34 934 7 HOH HOH . M 7 HOH A 35 935 66 HOH HOH . M 7 HOH A 36 936 85 HOH HOH . M 7 HOH A 37 937 25 HOH HOH . M 7 HOH A 38 938 88 HOH HOH . M 7 HOH A 39 939 48 HOH HOH . M 7 HOH A 40 940 11 HOH HOH . M 7 HOH A 41 941 40 HOH HOH . M 7 HOH A 42 942 43 HOH HOH . M 7 HOH A 43 943 37 HOH HOH . M 7 HOH A 44 944 17 HOH HOH . M 7 HOH A 45 945 34 HOH HOH . M 7 HOH A 46 946 67 HOH HOH . M 7 HOH A 47 947 6 HOH HOH . M 7 HOH A 48 948 19 HOH HOH . M 7 HOH A 49 949 84 HOH HOH . M 7 HOH A 50 950 86 HOH HOH . M 7 HOH A 51 951 47 HOH HOH . M 7 HOH A 52 952 3 HOH HOH . M 7 HOH A 53 953 15 HOH HOH . M 7 HOH A 54 954 70 HOH HOH . M 7 HOH A 55 955 63 HOH HOH . M 7 HOH A 56 956 31 HOH HOH . M 7 HOH A 57 957 69 HOH HOH . M 7 HOH A 58 958 68 HOH HOH . M 7 HOH A 59 959 89 HOH HOH . M 7 HOH A 60 960 8 HOH HOH . M 7 HOH A 61 961 23 HOH HOH . M 7 HOH A 62 962 20 HOH HOH . M 7 HOH A 63 963 93 HOH HOH . M 7 HOH A 64 964 27 HOH HOH . M 7 HOH A 65 965 42 HOH HOH . M 7 HOH A 66 966 2 HOH HOH . M 7 HOH A 67 967 13 HOH HOH . M 7 HOH A 68 968 5 HOH HOH . M 7 HOH A 69 969 45 HOH HOH . M 7 HOH A 70 970 29 HOH HOH . M 7 HOH A 71 971 38 HOH HOH . M 7 HOH A 72 972 9 HOH HOH . M 7 HOH A 73 973 21 HOH HOH . M 7 HOH A 74 974 58 HOH HOH . M 7 HOH A 75 975 28 HOH HOH . M 7 HOH A 76 976 14 HOH HOH . M 7 HOH A 77 977 52 HOH HOH . M 7 HOH A 78 978 77 HOH HOH . M 7 HOH A 79 979 57 HOH HOH . M 7 HOH A 80 980 83 HOH HOH . M 7 HOH A 81 981 33 HOH HOH . M 7 HOH A 82 982 35 HOH HOH . M 7 HOH A 83 983 61 HOH HOH . M 7 HOH A 84 984 78 HOH HOH . M 7 HOH A 85 985 76 HOH HOH . M 7 HOH A 86 986 26 HOH HOH . M 7 HOH A 87 987 54 HOH HOH . M 7 HOH A 88 988 62 HOH HOH . M 7 HOH A 89 989 80 HOH HOH . M 7 HOH A 90 990 46 HOH HOH . M 7 HOH A 91 991 91 HOH HOH . M 7 HOH A 92 992 60 HOH HOH . M 7 HOH A 93 993 97 HOH HOH . M 7 HOH A 94 994 30 HOH HOH . M 7 HOH A 95 995 56 HOH HOH . M 7 HOH A 96 996 59 HOH HOH . M 7 HOH A 97 997 94 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 0.903 _atom_site.Cartn_y -1.44 _atom_site.Cartn_z 25.208 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 805 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #