data_7O37 # _model_server_result.job_id FSr75oHj0LfMuANVl608WA _model_server_result.datetime_utc '2024-12-03 18:44:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"QA","auth_seq_id":201}' # _entry.id 7O37 # _exptl.entry_id 7O37 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 175.82 _entity.id 29 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7O37 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 34-meric _pdbx_struct_assembly.oligomeric_count 34 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 29 QA N N ? 29 GB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 H SG CYS 22 H CYS 22 1_555 H SG CYS 66 H CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 H SG CYS 38 H CYS 38 1_555 H SG CYS 52 H CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 O SG CYS 144 P CYS 144 1_555 O SG CYS 160 P CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf5 R SG CYS 22 S CYS 22 1_555 R SG CYS 66 S CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 R SG CYS 38 S CYS 38 1_555 R SG CYS 52 S CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 DA SG CYS 29 h CYS 29 1_555 DA SG CYS 64 h CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 DA SG CYS 39 h CYS 39 1_555 DA SG CYS 53 h CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale1 D SG CYS 37 D CYS 37 1_555 PA CAB HEC . D HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.709 ? covale ? covale2 D SG CYS 40 D CYS 40 1_555 PA CAC HEC . D HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? covale ? covale3 N SG CYS 37 O CYS 37 1_555 FB CAB HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.651 ? covale ? covale4 N SG CYS 40 O CYS 40 1_555 FB CAC HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 KA FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 LA FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 KA FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 LA FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 PA FE HEC . D HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 PA FE HEC . D HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 QA FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc8 E SG CYS 158 E CYS 158 1_555 QA FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc9 M NE2 HIS 83 N HIS 83 1_555 AB FE HEM . N HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc10 M NE2 HIS 97 N HIS 97 1_555 BB FE HEM . N HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc11 M NE2 HIS 182 N HIS 182 1_555 AB FE HEM . N HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc12 M NE2 HIS 196 N HIS 196 1_555 BB FE HEM . N HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc13 N NE2 HIS 41 O HIS 41 1_555 FB FE HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc14 N SD MET 160 O MET 160 1_555 FB FE HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc15 O SG CYS 139 P CYS 139 1_555 GB FE1 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc16 O ND1 HIS 141 P HIS 141 1_555 GB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc17 O SG CYS 158 P CYS 158 1_555 GB FE1 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc18 O ND1 HIS 161 P HIS 161 1_555 GB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc19 O NE2 HIS 161 P HIS 161 1_555 GB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc20 W O GLU 40 a GLU 40 1_555 LB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc21 W OE2 GLU 40 a GLU 40 1_555 LB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc22 W O GLY 45 a GLY 45 1_555 LB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc23 W NE2 HIS 61 a HIS 61 1_555 MB FE HEA . a HEA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc24 W ND1 HIS 240 a HIS 240 1_555 KB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc25 W NE2 HIS 290 a HIS 290 1_555 KB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc26 W NE2 HIS 291 a HIS 291 1_555 KB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc27 W NE2 HIS 376 a HIS 376 1_555 NB FE HEA . a HEA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc28 W NE2 HIS 378 a HIS 378 1_555 MB FE HEA . a HEA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc29 W O SER 441 a SER 441 1_555 LB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc30 X ND1 HIS 161 b HIS 161 1_555 TB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc31 X SG CYS 196 b CYS 196 1_555 TB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc32 X SG CYS 196 b CYS 196 1_555 TB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc33 X OE1 GLU 198 b GLU 198 1_555 RB MG MG . b MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc34 X O GLU 198 b GLU 198 1_555 TB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc35 X SG CYS 200 b CYS 200 1_555 TB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc36 X SG CYS 200 b CYS 200 1_555 TB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc37 X ND1 HIS 204 b HIS 204 1_555 TB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc38 X SD MET 207 b MET 207 1_555 TB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc39 BA SG CYS 61 f CYS 61 1_555 WB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc40 BA SG CYS 63 f CYS 63 1_555 WB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc41 BA SG CYS 83 f CYS 83 1_555 WB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc42 BA SG CYS 86 f CYS 86 1_555 WB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 471 n n FE1 S2 FES sing 472 n n FE2 S1 FES sing 473 n n FE2 S2 FES sing 474 n n # _atom_sites.entry_id 7O37 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code IA 25 3PE A 1 501 206 3PE 3PE . JA 26 CDL A 1 502 207 CDL CDL . KA 27 HEM C 1 401 382 HEM HEM . LA 27 HEM C 1 402 383 HEM HEM . MA 25 3PE C 1 403 385 3PE 3PE . NA 26 CDL D 1 301 387 CDL CDL . OA 25 3PE D 1 302 249 3PE 3PE . PA 28 HEC D 1 303 251 HEC HEC . QA 29 FES E 1 201 201 FES FES . RA 30 PC1 E 1 202 205 PC1 PC1 . SA 25 3PE F 1 201 201 3PE 3PE . TA 26 CDL G 1 101 386 CDL CDL . UA 25 3PE G 1 102 101 3PE 3PE . VA 30 PC1 G 1 103 201 PC1 PC1 . WA 31 TGL G 1 104 601 TGL TGL . XA 30 PC1 G 1 105 101 PC1 PC1 . YA 25 3PE L 1 501 206 3PE 3PE . ZA 26 CDL L 1 502 207 CDL CDL . AB 27 HEM N 1 401 382 HEM HEM . BB 27 HEM N 1 402 383 HEM HEM . CB 25 3PE N 1 403 385 3PE 3PE . DB 26 CDL O 1 301 387 CDL CDL . EB 25 3PE O 1 302 249 3PE 3PE . FB 28 HEC O 1 303 251 HEC HEC . GB 29 FES P 1 201 201 FES FES . HB 26 CDL R 1 101 386 CDL CDL . IB 25 3PE R 1 102 101 3PE 3PE . JB 30 PC1 U 1 101 205 PC1 PC1 . KB 32 CU a 1 601 515 CU CU . LB 33 NA a 1 602 517 NA NA . MB 34 HEA a 1 603 518 HEA HEA . NB 34 HEA a 1 604 519 HEA HEA . OB 25 3PE a 1 605 521 3PE 3PE . PB 30 PC1 a 1 606 232 PC1 PC1 . QB 25 3PE a 1 607 263 3PE 3PE . RB 35 MG b 1 301 516 MG MG . SB 25 3PE b 1 302 520 3PE 3PE . TB 36 CUA b 1 303 231 CUA CUA . UB 25 3PE b 1 304 77 3PE 3PE . VB 25 3PE c 1 301 262 3PE 3PE . WB 37 ZN f 1 100 100 ZN ZN . XB 25 3PE g 1 101 85 3PE 3PE . YB 25 3PE k 1 101 46 3PE 3PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . QA 29 134.932 92.528 41.211 1 290.72 ? FE1 FES 201 E 1 HETATM 2 FE FE2 FES . . . QA 29 135.534 94.95 40.198 1 353.88 ? FE2 FES 201 E 1 HETATM 3 S S1 FES . . . QA 29 136.902 93.506 41.139 1 319.98 ? S1 FES 201 E 1 HETATM 4 S S2 FES . . . QA 29 133.629 93.856 40.029 1 323.6 ? S2 FES 201 E 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 68 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #